RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 ZNF335Q9H4Z2 1342 aaPredicted RBP34.73■■■■□ 3.15
CLIC3-203ENST00000494426 LTBP4Q8N2S1 1624 aa34.73■■■■□ 3.15
CLIC3-203ENST00000494426 TRIM26Q12899 539 aaPredicted RBP34.7■■■■□ 3.15
CLIC3-203ENST00000494426 HDGFP51858 240 aaKnown RBP34.65■■■■□ 3.14
CLIC3-203ENST00000494426 NUTM2DQ5VT03 806 aaPredicted RBP34.65■■■■□ 3.14
CLIC3-203ENST00000494426 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.63■■■■□ 3.13
CLIC3-203ENST00000494426 CERKQ8TCT0 537 aa34.63■■■■□ 3.13
CLIC3-203ENST00000494426 CCDC144AA2RUR9 1427 aa34.62■■■■□ 3.13
CLIC3-203ENST00000494426 PLEKHG1Q9ULL1 1385 aa34.62■■■■□ 3.13
CLIC3-203ENST00000494426 ZNF326Q5BKZ1 582 aaKnown RBP34.61■■■■□ 3.13
CLIC3-203ENST00000494426 PPP1R15AO75807 674 aaPredicted RBP34.59■■■■□ 3.13
CLIC3-203ENST00000494426 FBXO41Q8TF61 875 aa34.59■■■■□ 3.13
CLIC3-203ENST00000494426 NEXMIFQ5QGS0 1516 aa34.59■■■■□ 3.13
CLIC3-203ENST00000494426 STRCP1A6NGW2 1772 aa34.57■■■■□ 3.12
CLIC3-203ENST00000494426 SLC26A8Q96RN1 970 aa34.57■■■■□ 3.12
CLIC3-203ENST00000494426 SENP3Q9H4L4 574 aaPredicted RBP34.57■■■■□ 3.12
CLIC3-203ENST00000494426 ANKRD30BQ9BXX2 1392 aa34.56■■■■□ 3.12
CLIC3-203ENST00000494426 SPATA31E1Q6ZUB1 1445 aa34.54■■■■□ 3.12
CLIC3-203ENST00000494426 BCANQ96GW7 911 aa34.52■■■■□ 3.12
CLIC3-203ENST00000494426 ADAMTS13Q76LX8 1427 aa34.5■■■■□ 3.11
CLIC3-203ENST00000494426 CPS1P31327 1500 aa34.49■■■■□ 3.11
CLIC3-203ENST00000494426 PPLO60437 1756 aa34.48■■■■□ 3.11
CLIC3-203ENST00000494426 RPGRIP1LQ68CZ1 1315 aa34.48■■■■□ 3.11
CLIC3-203ENST00000494426 NRXN3Q9Y4C0 1643 aa34.47■■■■□ 3.11
CLIC3-203ENST00000494426 TBX22Q9Y458 520 aa34.46■■■■□ 3.11
CLIC3-203ENST00000494426 RGL3Q3MIN7 710 aa34.45■■■■□ 3.11
CLIC3-203ENST00000494426 SETBP1Q9Y6X0 1596 aa34.44■■■■□ 3.1
CLIC3-203ENST00000494426 IQSEC2Q5JU85 1478 aa34.43■■■■□ 3.1
CLIC3-203ENST00000494426 IFT172Q9UG01 1749 aa34.41■■■■□ 3.1
CLIC3-203ENST00000494426 DIP2AQ14689 1571 aa34.41■■■■□ 3.1
CLIC3-203ENST00000494426 VGFO15240 615 aaPredicted RBP34.4■■■■□ 3.1
CLIC3-203ENST00000494426 KCNA6P17658 529 aa34.4■■■■□ 3.1
CLIC3-203ENST00000494426 CHD2O14647 1828 aaKnown RBP34.39■■■■□ 3.1
CLIC3-203ENST00000494426 LRRC7Q96NW7 1537 aa34.38■■■■□ 3.09
CLIC3-203ENST00000494426 NWD1Q149M9 1564 aa34.37■■■■□ 3.09
CLIC3-203ENST00000494426 ADGRF5Q8IZF2 1346 aa34.32■■■■□ 3.09
CLIC3-203ENST00000494426 XIRP1Q702N8 1843 aaKnown RBP34.31■■■■□ 3.08
CLIC3-203ENST00000494426 PIK3R4Q99570 1358 aa34.31■■■■□ 3.08
CLIC3-203ENST00000494426 DHX57Q6P158 1386 aaKnown RBP34.29■■■■□ 3.08
CLIC3-203ENST00000494426 SETD1AO15047 1707 aaKnown RBP34.29■■■■□ 3.08
CLIC3-203ENST00000494426 PTPRUQ92729 1446 aa34.29■■■■□ 3.08
CLIC3-203ENST00000494426 METP08581 1390 aa34.28■■■■□ 3.08
CLIC3-203ENST00000494426 NKTRP30414 1462 aaKnown RBP34.27■■■■□ 3.08
CLIC3-203ENST00000494426 ALKQ9UM73 1620 aa34.26■■■■□ 3.08
CLIC3-203ENST00000494426 PROSER2Q86WR7 435 aaPredicted RBP34.23■■■■□ 3.07
CLIC3-203ENST00000494426 AMOTL2Q9Y2J4 779 aa34.22■■■■□ 3.07
CLIC3-203ENST00000494426 RBM33Q96EV2 1170 aaKnown RBP34.21■■■■□ 3.07
CLIC3-203ENST00000494426 TMEM94Q12767 1356 aa34.21■■■■□ 3.07
CLIC3-203ENST00000494426 MYOM2P54296 1465 aa34.2■■■■□ 3.07
CLIC3-203ENST00000494426 XRN1Q8IZH2 1706 aaKnown RBP34.2■■■■□ 3.07
CLIC3-203ENST00000494426 NRXN1Q9ULB1 1477 aa34.2■■■■□ 3.06
CLIC3-203ENST00000494426 PCGF6Q9BYE7 350 aa34.19■■■■□ 3.06
CLIC3-203ENST00000494426 PIK3C2GO75747 1445 aa34.19■■■■□ 3.06
CLIC3-203ENST00000494426 UBAP1LF5GYI3 381 aa34.17■■■■□ 3.06
CLIC3-203ENST00000494426 DCAF11Q8TEB1 546 aa34.14■■■■□ 3.06
CLIC3-203ENST00000494426 SIN3AQ96ST3 1273 aa34.14■■■■□ 3.06
CLIC3-203ENST00000494426 KDM2AQ9Y2K7 1162 aa34.11■■■■□ 3.05
CLIC3-203ENST00000494426 C14orf93Q9H972 538 aaKnown RBP34.09■■■■□ 3.05
CLIC3-203ENST00000494426 TOM1O60784 492 aa34.08■■■■□ 3.05
CLIC3-203ENST00000494426 ASXL1Q8IXJ9 1541 aa34.08■■■■□ 3.05
CLIC3-203ENST00000494426 NCOA3Q9Y6Q9 1424 aa34.06■■■■□ 3.04
CLIC3-203ENST00000494426 CFAP70Q5T0N1 1121 aa34.06■■■■□ 3.04
CLIC3-203ENST00000494426 STAC3Q96MF2 364 aa34.06■■■■□ 3.04
CLIC3-203ENST00000494426 TMEM132EQ6IEE7 984 aa34.04■■■■□ 3.04
CLIC3-203ENST00000494426 LAMC1P11047 1609 aa34.03■■■■□ 3.04
CLIC3-203ENST00000494426 PRAG1Q86YV5 1406 aa34.03■■■■□ 3.04
CLIC3-203ENST00000494426 NEUROD1Q13562 356 aa34.02■■■■□ 3.04
CLIC3-203ENST00000494426 MSH6P52701 1360 aa33.99■■■■□ 3.03
CLIC3-203ENST00000494426 ROBO2Q9HCK4 1378 aa33.99■■■■□ 3.03
CLIC3-203ENST00000494426 PTCH1Q13635 1447 aa33.99■■■■□ 3.03
CLIC3-203ENST00000494426 PIP4K2BP78356 416 aa33.98■■■■□ 3.03
CLIC3-203ENST00000494426 LRPPRCP42704 1394 aaKnown RBP33.98■■■■□ 3.03
CLIC3-203ENST00000494426 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.97■■■■□ 3.03
CLIC3-203ENST00000494426 L3MBTL2Q969R5 705 aa33.96■■■■□ 3.03
CLIC3-203ENST00000494426 STK26Q9P289 416 aa33.95■■■■□ 3.03
CLIC3-203ENST00000494426 YTHDC2Q9H6S0 1430 aaKnown RBP33.95■■■■□ 3.02
CLIC3-203ENST00000494426 KNDC1Q76NI1 1749 aa33.94■■■■□ 3.02
CLIC3-203ENST00000494426 C14orf37Q86TY3 774 aa33.94■■■■□ 3.02
CLIC3-203ENST00000494426 C19orf44Q9H6X5 657 aa33.94■■■■□ 3.02
CLIC3-203ENST00000494426 ABCC11Q96J66 1382 aa33.94■■■■□ 3.02
CLIC3-203ENST00000494426 TECPR2O15040 1411 aa33.94■■■■□ 3.02
CLIC3-203ENST00000494426 ADGRB1O14514 1584 aa33.93■■■■□ 3.02
CLIC3-203ENST00000494426 SCAF1Q9H7N4 1312 aaKnown RBP33.91■■■■□ 3.02
CLIC3-203ENST00000494426 NALCNQ8IZF0 1738 aa33.9■■■■□ 3.02
CLIC3-203ENST00000494426 ADGRL3Q9HAR2 1447 aa33.87■■■■□ 3.01
CLIC3-203ENST00000494426 WAPLQ7Z5K2 1190 aa33.85■■■■□ 3.01
CLIC3-203ENST00000494426 KIAA1210Q9ULL0 1709 aa33.84■■■■□ 3.01
CLIC3-203ENST00000494426 SLAIN2Q9P270 581 aa33.84■■■■□ 3.01
CLIC3-203ENST00000494426 DCCP43146 1447 aa33.83■■■■□ 3.01
CLIC3-203ENST00000494426 CADPS2Q86UW7 1296 aa33.83■■■■□ 3.01
CLIC3-203ENST00000494426 SIRT1Q96EB6 747 aa33.83■■■■□ 3.01
CLIC3-203ENST00000494426 PLEKHH1Q9ULM0 1364 aa33.83■■■■□ 3.01
CLIC3-203ENST00000494426 FAM135BQ49AJ0 1406 aa33.82■■■■□ 3
CLIC3-203ENST00000494426 ATF3P18847 181 aa33.82■■■■□ 3
CLIC3-203ENST00000494426 ROBO1Q9Y6N7 1651 aa33.79■■■■□ 3
CLIC3-203ENST00000494426 HSPA1LP34931 641 aa33.78■■■■□ 3
CLIC3-203ENST00000494426 DLC1Q96QB1 1528 aa33.78■■■■□ 3
CLIC3-203ENST00000494426 NBPF1Q3BBV0 1214 aa33.76■■■□□ 2.99
CLIC3-203ENST00000494426 TRAK1Q9UPV9 953 aa33.75■■■□□ 2.99
CLIC3-203ENST00000494426 MST1RQ04912 1400 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms