RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CPS1P31327 1500 aa32.68■■■□□ 2.82
HPS3-207ENST00000494327 SPHKAPQ2M3C7 1700 aa32.68■■■□□ 2.82
HPS3-207ENST00000494327 ZFYVE9O95405 1425 aa32.67■■■□□ 2.82
HPS3-207ENST00000494327 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.66■■■□□ 2.82
HPS3-207ENST00000494327 SETD5Q9C0A6 1442 aa32.66■■■□□ 2.82
HPS3-207ENST00000494327 UBAP1LF5GYI3 381 aa32.64■■■□□ 2.82
HPS3-207ENST00000494327 FOXD1Q16676 465 aa32.64■■■□□ 2.82
HPS3-207ENST00000494327 ZNF326Q5BKZ1 582 aaKnown RBP32.64■■■□□ 2.82
HPS3-207ENST00000494327 MPHOSPH9Q99550 1183 aa32.61■■■□□ 2.81
HPS3-207ENST00000494327 PLEKHG1Q9ULL1 1385 aa32.59■■■□□ 2.81
HPS3-207ENST00000494327 TRPM2O94759 1503 aa32.59■■■□□ 2.81
HPS3-207ENST00000494327 STRCP1A6NGW2 1772 aa32.57■■■□□ 2.8
HPS3-207ENST00000494327 CLTCL1P53675 1640 aa32.56■■■□□ 2.8
HPS3-207ENST00000494327 RAB3GAP2Q9H2M9 1393 aa32.55■■■□□ 2.8
HPS3-207ENST00000494327 ACIN1Q9UKV3 1341 aaKnown RBP32.53■■■□□ 2.8
HPS3-207ENST00000494327 LRRC7Q96NW7 1537 aa32.53■■■□□ 2.8
HPS3-207ENST00000494327 KCNA6P17658 529 aa32.53■■■□□ 2.8
HPS3-207ENST00000494327 TOM1O60784 492 aa32.49■■■□□ 2.79
HPS3-207ENST00000494327 TBX22Q9Y458 520 aa32.48■■■□□ 2.79
HPS3-207ENST00000494327 SCAF1Q9H7N4 1312 aaKnown RBP32.48■■■□□ 2.79
HPS3-207ENST00000494327 PIP4K2BP78356 416 aa32.47■■■□□ 2.79
HPS3-207ENST00000494327 PROSER2Q86WR7 435 aaPredicted RBP32.45■■■□□ 2.79
HPS3-207ENST00000494327 KIF1BO60333 1816 aa32.43■■■□□ 2.78
HPS3-207ENST00000494327 RBM33Q96EV2 1170 aaKnown RBP32.43■■■□□ 2.78
HPS3-207ENST00000494327 ADAMTS13Q76LX8 1427 aa32.43■■■□□ 2.78
HPS3-207ENST00000494327 CCDC144AA2RUR9 1427 aa32.41■■■□□ 2.78
HPS3-207ENST00000494327 TMEM94Q12767 1356 aa32.39■■■□□ 2.78
HPS3-207ENST00000494327 NEXMIFQ5QGS0 1516 aa32.37■■■□□ 2.77
HPS3-207ENST00000494327 RGL3Q3MIN7 710 aa32.36■■■□□ 2.77
HPS3-207ENST00000494327 RPGRIP1LQ68CZ1 1315 aa32.34■■■□□ 2.77
HPS3-207ENST00000494327 NWD1Q149M9 1564 aa32.34■■■□□ 2.77
HPS3-207ENST00000494327 VGFO15240 615 aaPredicted RBP32.34■■■□□ 2.77
HPS3-207ENST00000494327 DIP2AQ14689 1571 aa32.33■■■□□ 2.77
HPS3-207ENST00000494327 NKTRP30414 1462 aaKnown RBP32.33■■■□□ 2.77
HPS3-207ENST00000494327 HRCP23327 699 aa32.32■■■□□ 2.76
HPS3-207ENST00000494327 PIK3R4Q99570 1358 aa32.31■■■□□ 2.76
HPS3-207ENST00000494327 AMOTL2Q9Y2J4 779 aa32.3■■■□□ 2.76
HPS3-207ENST00000494327 CHD2O14647 1828 aaKnown RBP32.3■■■□□ 2.76
HPS3-207ENST00000494327 SETBP1Q9Y6X0 1596 aa32.29■■■□□ 2.76
HPS3-207ENST00000494327 XIRP1Q702N8 1843 aaKnown RBP32.28■■■□□ 2.76
HPS3-207ENST00000494327 ALKQ9UM73 1620 aa32.27■■■□□ 2.76
HPS3-207ENST00000494327 NRXN3Q9Y4C0 1643 aa32.27■■■□□ 2.76
HPS3-207ENST00000494327 PTPRUQ92729 1446 aa32.26■■■□□ 2.75
HPS3-207ENST00000494327 METP08581 1390 aa32.25■■■□□ 2.75
HPS3-207ENST00000494327 C14orf37Q86TY3 774 aa32.24■■■□□ 2.75
HPS3-207ENST00000494327 SPATA31E1Q6ZUB1 1445 aa32.24■■■□□ 2.75
HPS3-207ENST00000494327 HSPA1LP34931 641 aa32.23■■■□□ 2.75
HPS3-207ENST00000494327 MSH6P52701 1360 aa32.21■■■□□ 2.75
HPS3-207ENST00000494327 ADGRF5Q8IZF2 1346 aa32.19■■■□□ 2.74
HPS3-207ENST00000494327 PPLO60437 1756 aa32.17■■■□□ 2.74
HPS3-207ENST00000494327 ANKRD30BQ9BXX2 1392 aa32.16■■■□□ 2.74
HPS3-207ENST00000494327 NCOA3Q9Y6Q9 1424 aa32.13■■■□□ 2.73
HPS3-207ENST00000494327 C19orf44Q9H6X5 657 aa32.1■■■□□ 2.73
HPS3-207ENST00000494327 SLAIN2Q9P270 581 aa32.09■■■□□ 2.73
HPS3-207ENST00000494327 XRN1Q8IZH2 1706 aaKnown RBP32.09■■■□□ 2.73
HPS3-207ENST00000494327 ATF3P18847 181 aa32.07■■■□□ 2.72
HPS3-207ENST00000494327 FAM135BQ49AJ0 1406 aa32.05■■■□□ 2.72
HPS3-207ENST00000494327 CADPS2Q86UW7 1296 aa32.04■■■□□ 2.72
HPS3-207ENST00000494327 IFT172Q9UG01 1749 aa32.03■■■□□ 2.72
HPS3-207ENST00000494327 SETD1AO15047 1707 aaKnown RBP32.02■■■□□ 2.72
HPS3-207ENST00000494327 TMEM132EQ6IEE7 984 aa32■■■□□ 2.71
HPS3-207ENST00000494327 STK26Q9P289 416 aa32■■■□□ 2.71
HPS3-207ENST00000494327 KDM2AQ9Y2K7 1162 aa31.99■■■□□ 2.71
HPS3-207ENST00000494327 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.99■■■□□ 2.71
HPS3-207ENST00000494327 PIK3C2GO75747 1445 aa31.99■■■□□ 2.71
HPS3-207ENST00000494327 ROBO2Q9HCK4 1378 aa31.98■■■□□ 2.71
HPS3-207ENST00000494327 DISP3Q9P2K9 1392 aa31.96■■■□□ 2.71
HPS3-207ENST00000494327 ROBO1Q9Y6N7 1651 aa31.96■■■□□ 2.71
HPS3-207ENST00000494327 DCAF11Q8TEB1 546 aa31.96■■■□□ 2.71
HPS3-207ENST00000494327 CFAP70Q5T0N1 1121 aa31.95■■■□□ 2.71
HPS3-207ENST00000494327 PTCH1Q13635 1447 aa31.94■■■□□ 2.7
HPS3-207ENST00000494327 TRIM26Q12899 539 aaPredicted RBP31.94■■■□□ 2.7
HPS3-207ENST00000494327 C14orf93Q9H972 538 aaKnown RBP31.94■■■□□ 2.7
HPS3-207ENST00000494327 MYOM2P54296 1465 aa31.93■■■□□ 2.7
HPS3-207ENST00000494327 ADGRL3Q9HAR2 1447 aa31.92■■■□□ 2.7
HPS3-207ENST00000494327 DCCP43146 1447 aa31.9■■■□□ 2.7
HPS3-207ENST00000494327 NRXN1Q9ULB1 1477 aa31.9■■■□□ 2.7
HPS3-207ENST00000494327 LRPPRCP42704 1394 aaKnown RBP31.89■■■□□ 2.7
HPS3-207ENST00000494327 WAPLQ7Z5K2 1190 aa31.87■■■□□ 2.69
HPS3-207ENST00000494327 ASXL1Q8IXJ9 1541 aa31.86■■■□□ 2.69
HPS3-207ENST00000494327 PRAG1Q86YV5 1406 aa31.86■■■□□ 2.69
HPS3-207ENST00000494327 DHX57Q6P158 1386 aaKnown RBP31.85■■■□□ 2.69
HPS3-207ENST00000494327 YTHDC2Q9H6S0 1430 aaKnown RBP31.84■■■□□ 2.69
HPS3-207ENST00000494327 ABCC11Q96J66 1382 aa31.84■■■□□ 2.69
HPS3-207ENST00000494327 BRINP3Q76B58 766 aa31.84■■■□□ 2.69
HPS3-207ENST00000494327 NALCNQ8IZF0 1738 aa31.83■■■□□ 2.69
HPS3-207ENST00000494327 MST1RQ04912 1400 aa31.83■■■□□ 2.69
HPS3-207ENST00000494327 STAC3Q96MF2 364 aa31.82■■■□□ 2.68
HPS3-207ENST00000494327 TECPR2O15040 1411 aa31.8■■■□□ 2.68
HPS3-207ENST00000494327 PLEKHH1Q9ULM0 1364 aa31.78■■■□□ 2.68
HPS3-207ENST00000494327 SIN3AQ96ST3 1273 aa31.77■■■□□ 2.68
HPS3-207ENST00000494327 LAMC1P11047 1609 aa31.77■■■□□ 2.68
HPS3-207ENST00000494327 PHLPP1O60346 1717 aa31.77■■■□□ 2.68
HPS3-207ENST00000494327 MED1Q15648 1581 aaPredicted RBP31.76■■■□□ 2.67
HPS3-207ENST00000494327 NEUROD1Q13562 356 aa31.74■■■□□ 2.67
HPS3-207ENST00000494327 C1orf167Q5SNV9 1468 aa31.73■■■□□ 2.67
HPS3-207ENST00000494327 SIRT1Q96EB6 747 aa31.73■■■□□ 2.67
HPS3-207ENST00000494327 SAFB2Q14151 953 aaKnown RBP eCLIP31.72■■■□□ 2.67
HPS3-207ENST00000494327 PRAM1Q96QH2 718 aa31.71■■■□□ 2.67
HPS3-207ENST00000494327 TRAK1Q9UPV9 953 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms