RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
SAPCD1-211ENST00000494299 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
SAPCD1-211ENST00000494299 CHD2O14647 1828 aaKnown RBP20.03■□□□□ 0.8
SAPCD1-211ENST00000494299 ADAMTS13Q76LX8 1427 aa20.01■□□□□ 0.79
SAPCD1-211ENST00000494299 HDGFP51858 240 aaKnown RBP20■□□□□ 0.79
SAPCD1-211ENST00000494299 ABCF1Q8NE71 845 aaKnown RBP eCLIP20■□□□□ 0.79
SAPCD1-211ENST00000494299 DIP2AQ14689 1571 aa20■□□□□ 0.79
SAPCD1-211ENST00000494299 KCNA6P17658 529 aa19.99■□□□□ 0.79
SAPCD1-211ENST00000494299 NKTRP30414 1462 aaKnown RBP19.99■□□□□ 0.79
SAPCD1-211ENST00000494299 NRXN3Q9Y4C0 1643 aa19.98■□□□□ 0.79
SAPCD1-211ENST00000494299 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
SAPCD1-211ENST00000494299 TBX22Q9Y458 520 aa19.98■□□□□ 0.79
SAPCD1-211ENST00000494299 KIF1BO60333 1816 aa19.97■□□□□ 0.79
SAPCD1-211ENST00000494299 SETBP1Q9Y6X0 1596 aa19.97■□□□□ 0.79
SAPCD1-211ENST00000494299 SLC26A8Q96RN1 970 aa19.97■□□□□ 0.79
SAPCD1-211ENST00000494299 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
SAPCD1-211ENST00000494299 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
SAPCD1-211ENST00000494299 PIK3R4Q99570 1358 aa19.95■□□□□ 0.79
SAPCD1-211ENST00000494299 SETD5Q9C0A6 1442 aa19.94■□□□□ 0.78
SAPCD1-211ENST00000494299 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SAPCD1-211ENST00000494299 TOM1O60784 492 aa19.93■□□□□ 0.78
SAPCD1-211ENST00000494299 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
SAPCD1-211ENST00000494299 CHGAP10645 457 aaKnown RBP19.9■□□□□ 0.78
SAPCD1-211ENST00000494299 TMEM94Q12767 1356 aa19.9■□□□□ 0.78
SAPCD1-211ENST00000494299 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
SAPCD1-211ENST00000494299 NCOA3Q9Y6Q9 1424 aa19.89■□□□□ 0.77
SAPCD1-211ENST00000494299 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
SAPCD1-211ENST00000494299 PPLO60437 1756 aa19.88■□□□□ 0.77
SAPCD1-211ENST00000494299 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
SAPCD1-211ENST00000494299 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
SAPCD1-211ENST00000494299 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
SAPCD1-211ENST00000494299 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
SAPCD1-211ENST00000494299 HRCP23327 699 aa19.86■□□□□ 0.77
SAPCD1-211ENST00000494299 NUTM2DQ5VT03 806 aaPredicted RBP19.86■□□□□ 0.77
SAPCD1-211ENST00000494299 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
SAPCD1-211ENST00000494299 RPGRIP1LQ68CZ1 1315 aa19.85■□□□□ 0.77
SAPCD1-211ENST00000494299 PRAG1Q86YV5 1406 aa19.84■□□□□ 0.77
SAPCD1-211ENST00000494299 IFT172Q9UG01 1749 aa19.83■□□□□ 0.77
SAPCD1-211ENST00000494299 FOXD1Q16676 465 aa19.83■□□□□ 0.77
SAPCD1-211ENST00000494299 FAM135BQ49AJ0 1406 aa19.83■□□□□ 0.76
SAPCD1-211ENST00000494299 PROSER2Q86WR7 435 aaPredicted RBP19.82■□□□□ 0.76
SAPCD1-211ENST00000494299 METP08581 1390 aa19.81■□□□□ 0.76
SAPCD1-211ENST00000494299 CCDC144AA2RUR9 1427 aa19.8■□□□□ 0.76
SAPCD1-211ENST00000494299 HSPA1LP34931 641 aa19.8■□□□□ 0.76
SAPCD1-211ENST00000494299 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
SAPCD1-211ENST00000494299 BCANQ96GW7 911 aa19.8■□□□□ 0.76
SAPCD1-211ENST00000494299 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
SAPCD1-211ENST00000494299 VGFO15240 615 aaPredicted RBP19.78■□□□□ 0.76
SAPCD1-211ENST00000494299 AMOTL2Q9Y2J4 779 aa19.77■□□□□ 0.76
SAPCD1-211ENST00000494299 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
SAPCD1-211ENST00000494299 MSH6P52701 1360 aa19.75■□□□□ 0.75
SAPCD1-211ENST00000494299 RBM33Q96EV2 1170 aaKnown RBP19.75■□□□□ 0.75
SAPCD1-211ENST00000494299 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
SAPCD1-211ENST00000494299 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
SAPCD1-211ENST00000494299 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
SAPCD1-211ENST00000494299 DCCP43146 1447 aa19.74■□□□□ 0.75
SAPCD1-211ENST00000494299 NRXN1Q9ULB1 1477 aa19.73■□□□□ 0.75
SAPCD1-211ENST00000494299 PTCH1Q13635 1447 aa19.72■□□□□ 0.75
SAPCD1-211ENST00000494299 C19orf44Q9H6X5 657 aa19.72■□□□□ 0.75
SAPCD1-211ENST00000494299 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
SAPCD1-211ENST00000494299 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
SAPCD1-211ENST00000494299 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
SAPCD1-211ENST00000494299 ADGRF5Q8IZF2 1346 aa19.69■□□□□ 0.74
SAPCD1-211ENST00000494299 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
SAPCD1-211ENST00000494299 MYOM2P54296 1465 aa19.67■□□□□ 0.74
SAPCD1-211ENST00000494299 ASXL1Q8IXJ9 1541 aa19.67■□□□□ 0.74
SAPCD1-211ENST00000494299 ILDR2Q71H61 639 aa19.67■□□□□ 0.74
SAPCD1-211ENST00000494299 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
SAPCD1-211ENST00000494299 TECPR2O15040 1411 aa19.67■□□□□ 0.74
SAPCD1-211ENST00000494299 ADGRL3Q9HAR2 1447 aa19.67■□□□□ 0.74
SAPCD1-211ENST00000494299 CADPS2Q86UW7 1296 aa19.66■□□□□ 0.74
SAPCD1-211ENST00000494299 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
SAPCD1-211ENST00000494299 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
SAPCD1-211ENST00000494299 KNDC1Q76NI1 1749 aa19.63■□□□□ 0.73
SAPCD1-211ENST00000494299 AHDC1Q5TGY3 1603 aaPredicted RBP19.63■□□□□ 0.73
SAPCD1-211ENST00000494299 MST1RQ04912 1400 aa19.62■□□□□ 0.73
SAPCD1-211ENST00000494299 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
SAPCD1-211ENST00000494299 COL16A1Q07092 1604 aaPredicted RBP19.62■□□□□ 0.73
SAPCD1-211ENST00000494299 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
SAPCD1-211ENST00000494299 LAMC1P11047 1609 aa19.6■□□□□ 0.73
SAPCD1-211ENST00000494299 PHLPP1O60346 1717 aa19.59■□□□□ 0.73
SAPCD1-211ENST00000494299 LRPPRCP42704 1394 aaKnown RBP19.59■□□□□ 0.73
SAPCD1-211ENST00000494299 C14orf93Q9H972 538 aaKnown RBP19.59■□□□□ 0.73
SAPCD1-211ENST00000494299 ATF3P18847 181 aa19.58■□□□□ 0.72
SAPCD1-211ENST00000494299 NHSL1Q5SYE7 1610 aa19.57■□□□□ 0.72
SAPCD1-211ENST00000494299 BRINP3Q76B58 766 aa19.56■□□□□ 0.72
SAPCD1-211ENST00000494299 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
SAPCD1-211ENST00000494299 C14orf37Q86TY3 774 aa19.55■□□□□ 0.72
SAPCD1-211ENST00000494299 SIRT1Q96EB6 747 aa19.55■□□□□ 0.72
SAPCD1-211ENST00000494299 STAC3Q96MF2 364 aa19.55■□□□□ 0.72
SAPCD1-211ENST00000494299 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
SAPCD1-211ENST00000494299 ADGRB1O14514 1584 aa19.54■□□□□ 0.72
SAPCD1-211ENST00000494299 YTHDC2Q9H6S0 1430 aaKnown RBP19.54■□□□□ 0.72
SAPCD1-211ENST00000494299 C1orf167Q5SNV9 1468 aa19.53■□□□□ 0.72
SAPCD1-211ENST00000494299 SHPRHQ149N8 1683 aa19.52■□□□□ 0.71
SAPCD1-211ENST00000494299 JCADQ9P266 1359 aa19.5■□□□□ 0.71
SAPCD1-211ENST00000494299 TMEM132EQ6IEE7 984 aa19.5■□□□□ 0.71
SAPCD1-211ENST00000494299 DLC1Q96QB1 1528 aa19.5■□□□□ 0.71
SAPCD1-211ENST00000494299 CFAP70Q5T0N1 1121 aa19.49■□□□□ 0.71
SAPCD1-211ENST00000494299 SOCS7O14512 581 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms