RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 CHGAP10645 457 aaKnown RBP33.34■■■□□ 2.93
HLA-E-203ENST00000493699 KCNA6P17658 529 aa33.34■■■□□ 2.93
HLA-E-203ENST00000493699 SCAF1Q9H7N4 1312 aaKnown RBP33.33■■■□□ 2.93
HLA-E-203ENST00000493699 PLEKHG1Q9ULL1 1385 aa33.33■■■□□ 2.93
HLA-E-203ENST00000493699 HFM1A2PYH4 1435 aa33.31■■■□□ 2.92
HLA-E-203ENST00000493699 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.3■■■□□ 2.92
HLA-E-203ENST00000493699 PPP1R15AO75807 674 aaPredicted RBP33.28■■■□□ 2.92
HLA-E-203ENST00000493699 HSPA1LP34931 641 aa33.28■■■□□ 2.92
HLA-E-203ENST00000493699 BCANQ96GW7 911 aa33.28■■■□□ 2.92
HLA-E-203ENST00000493699 XIRP1Q702N8 1843 aaKnown RBP33.28■■■□□ 2.92
HLA-E-203ENST00000493699 SENP3Q9H4L4 574 aaPredicted RBP33.25■■■□□ 2.91
HLA-E-203ENST00000493699 DISP3Q9P2K9 1392 aa33.24■■■□□ 2.91
HLA-E-203ENST00000493699 SPHKAPQ2M3C7 1700 aa33.23■■■□□ 2.91
HLA-E-203ENST00000493699 TBX22Q9Y458 520 aa33.23■■■□□ 2.91
HLA-E-203ENST00000493699 TMEM94Q12767 1356 aa33.22■■■□□ 2.91
HLA-E-203ENST00000493699 NUTM2DQ5VT03 806 aaPredicted RBP33.22■■■□□ 2.91
HLA-E-203ENST00000493699 NWD1Q149M9 1564 aa33.21■■■□□ 2.91
HLA-E-203ENST00000493699 PROSER2Q86WR7 435 aaPredicted RBP33.2■■■□□ 2.91
HLA-E-203ENST00000493699 ADAMTS13Q76LX8 1427 aa33.19■■■□□ 2.9
HLA-E-203ENST00000493699 NKTRP30414 1462 aaKnown RBP33.18■■■□□ 2.9
HLA-E-203ENST00000493699 TRIM52Q96A61 297 aa33.17■■■□□ 2.9
HLA-E-203ENST00000493699 RBM33Q96EV2 1170 aaKnown RBP33.16■■■□□ 2.9
HLA-E-203ENST00000493699 CHD2O14647 1828 aaKnown RBP33.15■■■□□ 2.9
HLA-E-203ENST00000493699 TRPM2O94759 1503 aa33.13■■■□□ 2.89
HLA-E-203ENST00000493699 CLTCL1P53675 1640 aa33.11■■■□□ 2.89
HLA-E-203ENST00000493699 SLC4A1APQ9BWU0 796 aaKnown RBP33.1■■■□□ 2.89
HLA-E-203ENST00000493699 DIP2AQ14689 1571 aa33.09■■■□□ 2.89
HLA-E-203ENST00000493699 PIK3R4Q99570 1358 aa33.09■■■□□ 2.89
HLA-E-203ENST00000493699 ZNF326Q5BKZ1 582 aaKnown RBP33.08■■■□□ 2.89
HLA-E-203ENST00000493699 ILDR2Q71H61 639 aa33.07■■■□□ 2.88
HLA-E-203ENST00000493699 FAM135BQ49AJ0 1406 aa33.05■■■□□ 2.88
HLA-E-203ENST00000493699 NCOA3Q9Y6Q9 1424 aa33.01■■■□□ 2.87
HLA-E-203ENST00000493699 SETBP1Q9Y6X0 1596 aa33■■■□□ 2.87
HLA-E-203ENST00000493699 MSH6P52701 1360 aa33■■■□□ 2.87
HLA-E-203ENST00000493699 NRXN3Q9Y4C0 1643 aa33■■■□□ 2.87
HLA-E-203ENST00000493699 NEXMIFQ5QGS0 1516 aa33■■■□□ 2.87
HLA-E-203ENST00000493699 PTPRUQ92729 1446 aa33■■■□□ 2.87
HLA-E-203ENST00000493699 KIF1BO60333 1816 aa32.98■■■□□ 2.87
HLA-E-203ENST00000493699 AMOTL2Q9Y2J4 779 aa32.98■■■□□ 2.87
HLA-E-203ENST00000493699 FOXD1Q16676 465 aa32.95■■■□□ 2.87
HLA-E-203ENST00000493699 SLAIN2Q9P270 581 aa32.93■■■□□ 2.86
HLA-E-203ENST00000493699 MED1Q15648 1581 aaPredicted RBP32.92■■■□□ 2.86
HLA-E-203ENST00000493699 MPHOSPH9Q99550 1183 aa32.92■■■□□ 2.86
HLA-E-203ENST00000493699 METP08581 1390 aa32.92■■■□□ 2.86
HLA-E-203ENST00000493699 ROBO1Q9Y6N7 1651 aa32.89■■■□□ 2.86
HLA-E-203ENST00000493699 RPGRIP1LQ68CZ1 1315 aa32.89■■■□□ 2.86
HLA-E-203ENST00000493699 C19orf44Q9H6X5 657 aa32.89■■■□□ 2.86
HLA-E-203ENST00000493699 VGFO15240 615 aaPredicted RBP32.88■■■□□ 2.85
HLA-E-203ENST00000493699 SETD5Q9C0A6 1442 aa32.86■■■□□ 2.85
HLA-E-203ENST00000493699 XRN1Q8IZH2 1706 aaKnown RBP32.85■■■□□ 2.85
HLA-E-203ENST00000493699 ACIN1Q9UKV3 1341 aaKnown RBP32.85■■■□□ 2.85
HLA-E-203ENST00000493699 C14orf37Q86TY3 774 aa32.85■■■□□ 2.85
HLA-E-203ENST00000493699 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.82■■■□□ 2.85
HLA-E-203ENST00000493699 CADPS2Q86UW7 1296 aa32.82■■■□□ 2.84
HLA-E-203ENST00000493699 CCDC144AA2RUR9 1427 aa32.79■■■□□ 2.84
HLA-E-203ENST00000493699 ATF3P18847 181 aa32.79■■■□□ 2.84
HLA-E-203ENST00000493699 SOCS7O14512 581 aa32.77■■■□□ 2.84
HLA-E-203ENST00000493699 PPLO60437 1756 aa32.76■■■□□ 2.84
HLA-E-203ENST00000493699 SPATA31E1Q6ZUB1 1445 aa32.76■■■□□ 2.83
HLA-E-203ENST00000493699 DCCP43146 1447 aa32.74■■■□□ 2.83
HLA-E-203ENST00000493699 SETD1AO15047 1707 aaKnown RBP32.74■■■□□ 2.83
HLA-E-203ENST00000493699 RAB3GAP2Q9H2M9 1393 aa32.73■■■□□ 2.83
HLA-E-203ENST00000493699 RGL3Q3MIN7 710 aa32.71■■■□□ 2.83
HLA-E-203ENST00000493699 PHF23Q9BUL5 403 aaPredicted RBP32.69■■■□□ 2.82
HLA-E-203ENST00000493699 ADGRF5Q8IZF2 1346 aa32.68■■■□□ 2.82
HLA-E-203ENST00000493699 PHLPP1O60346 1717 aa32.67■■■□□ 2.82
HLA-E-203ENST00000493699 PRAG1Q86YV5 1406 aa32.66■■■□□ 2.82
HLA-E-203ENST00000493699 ADGRL3Q9HAR2 1447 aa32.66■■■□□ 2.82
HLA-E-203ENST00000493699 BRINP3Q76B58 766 aa32.65■■■□□ 2.82
HLA-E-203ENST00000493699 ANKRD30BQ9BXX2 1392 aa32.65■■■□□ 2.82
HLA-E-203ENST00000493699 PTCH1Q13635 1447 aa32.65■■■□□ 2.82
HLA-E-203ENST00000493699 ROBO2Q9HCK4 1378 aa32.64■■■□□ 2.82
HLA-E-203ENST00000493699 MST1RQ04912 1400 aa32.63■■■□□ 2.81
HLA-E-203ENST00000493699 COL16A1Q07092 1604 aaPredicted RBP32.62■■■□□ 2.81
HLA-E-203ENST00000493699 RGS17Q9UGC6 210 aaPredicted RBP32.62■■■□□ 2.81
HLA-E-203ENST00000493699 JCADQ9P266 1359 aa32.61■■■□□ 2.81
HLA-E-203ENST00000493699 AHDC1Q5TGY3 1603 aaPredicted RBP32.61■■■□□ 2.81
HLA-E-203ENST00000493699 IFT172Q9UG01 1749 aa32.6■■■□□ 2.81
HLA-E-203ENST00000493699 HRCP23327 699 aa32.59■■■□□ 2.81
HLA-E-203ENST00000493699 NALCNQ8IZF0 1738 aa32.58■■■□□ 2.81
HLA-E-203ENST00000493699 PIK3C2GO75747 1445 aa32.54■■■□□ 2.8
HLA-E-203ENST00000493699 ASXL1Q8IXJ9 1541 aa32.53■■■□□ 2.8
HLA-E-203ENST00000493699 TECPR2O15040 1411 aa32.48■■■□□ 2.79
HLA-E-203ENST00000493699 C1orf167Q5SNV9 1468 aa32.48■■■□□ 2.79
HLA-E-203ENST00000493699 LRPPRCP42704 1394 aaKnown RBP32.47■■■□□ 2.79
HLA-E-203ENST00000493699 TMEM132EQ6IEE7 984 aa32.47■■■□□ 2.79
HLA-E-203ENST00000493699 SPATA31A6Q5VVP1 1343 aa32.47■■■□□ 2.79
HLA-E-203ENST00000493699 ABCC11Q96J66 1382 aa32.46■■■□□ 2.79
HLA-E-203ENST00000493699 NRXN1Q9ULB1 1477 aa32.46■■■□□ 2.79
HLA-E-203ENST00000493699 C14orf93Q9H972 538 aaKnown RBP32.45■■■□□ 2.79
HLA-E-203ENST00000493699 STK26Q9P289 416 aa32.45■■■□□ 2.79
HLA-E-203ENST00000493699 NHSL1Q5SYE7 1610 aa32.44■■■□□ 2.78
HLA-E-203ENST00000493699 MYOM2P54296 1465 aa32.43■■■□□ 2.78
HLA-E-203ENST00000493699 WAPLQ7Z5K2 1190 aa32.42■■■□□ 2.78
HLA-E-203ENST00000493699 DDX17Q92841 729 aaKnown RBP32.42■■■□□ 2.78
HLA-E-203ENST00000493699 SHPRHQ149N8 1683 aa32.42■■■□□ 2.78
HLA-E-203ENST00000493699 POTEAQ6S8J7 498 aa32.41■■■□□ 2.78
HLA-E-203ENST00000493699 LRP6O75581 1613 aa32.4■■■□□ 2.78
HLA-E-203ENST00000493699 ORAI2Q96SN7 254 aa32.4■■■□□ 2.78
HLA-E-203ENST00000493699 CFAP70Q5T0N1 1121 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms