RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 APAF1O14727 1248 aa20■□□□□ 0.79
BRAT1-206ENST00000493232 TSR1Q2NL82 804 aaKnown RBP20■□□□□ 0.79
BRAT1-206ENST00000493232 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
BRAT1-206ENST00000493232 PDE4AP27815 886 aa19.99■□□□□ 0.79
BRAT1-206ENST00000493232 COG6Q9Y2V7 657 aa19.99■□□□□ 0.79
BRAT1-206ENST00000493232 TPM2P07951 284 aa19.99■□□□□ 0.79
BRAT1-206ENST00000493232 FOXD4L5Q5VV16 416 aaPredicted RBP19.98■□□□□ 0.79
BRAT1-206ENST00000493232 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
BRAT1-206ENST00000493232 FOXD4L4Q8WXT5 416 aaPredicted RBP19.98■□□□□ 0.79
BRAT1-206ENST00000493232 IFIT2P09913 472 aaKnown RBP19.98■□□□□ 0.79
BRAT1-206ENST00000493232 PSME1Q06323 249 aa19.98■□□□□ 0.79
BRAT1-206ENST00000493232 CRBNQ96SW2 442 aa19.98■□□□□ 0.79
BRAT1-206ENST00000493232 GOLGA6L19H0YKK7 550 aa19.98■□□□□ 0.79
BRAT1-206ENST00000493232 RIPK4P57078 832 aa19.97■□□□□ 0.79
BRAT1-206ENST00000493232 DDX49Q9Y6V7 483 aaKnown RBP19.97■□□□□ 0.79
BRAT1-206ENST00000493232 TPM1P09493 284 aa19.97■□□□□ 0.79
BRAT1-206ENST00000493232 TRIM29Q14134 588 aa19.97■□□□□ 0.79
BRAT1-206ENST00000493232 DZIP1LQ8IYY4 767 aaKnown RBP19.97■□□□□ 0.79
BRAT1-206ENST00000493232 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
BRAT1-206ENST00000493232 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
BRAT1-206ENST00000493232 BECN2A8MW95 431 aa19.96■□□□□ 0.79
BRAT1-206ENST00000493232 RUNDC1Q96C34 613 aa19.96■□□□□ 0.79
BRAT1-206ENST00000493232 CUX1P39880 1505 aa19.96■□□□□ 0.79
BRAT1-206ENST00000493232 PLIN1O60240 522 aa19.96■□□□□ 0.79
BRAT1-206ENST00000493232 PES1O00541 588 aaKnown RBP19.95■□□□□ 0.78
BRAT1-206ENST00000493232 TRIM34Q9BYJ4 488 aa19.95■□□□□ 0.78
BRAT1-206ENST00000493232 HSP90AB4PQ58FF6 505 aa19.95■□□□□ 0.78
BRAT1-206ENST00000493232 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
BRAT1-206ENST00000493232 MIA2Q96PC5 1412 aa19.95■□□□□ 0.78
BRAT1-206ENST00000493232 GNAI1P63096 354 aa19.94■□□□□ 0.78
BRAT1-206ENST00000493232 G3BP1Q13283 466 aaKnown RBP eCLIP19.94■□□□□ 0.78
BRAT1-206ENST00000493232 PRM3Q9NNZ6 103 aa19.93■□□□□ 0.78
BRAT1-206ENST00000493232 CCDC47Q96A33 483 aaKnown RBP19.93■□□□□ 0.78
BRAT1-206ENST00000493232 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
BRAT1-206ENST00000493232 MSH5O43196 834 aa19.92■□□□□ 0.78
BRAT1-206ENST00000493232 FKBP5Q13451 457 aaPredicted RBP19.92■□□□□ 0.78
BRAT1-206ENST00000493232 MCTP1Q6DN14 999 aa19.92■□□□□ 0.78
BRAT1-206ENST00000493232 AAMPQ13685 434 aa19.92■□□□□ 0.78
BRAT1-206ENST00000493232 TRDNQ13061 729 aa19.92■□□□□ 0.78
BRAT1-206ENST00000493232 CPLX1O14810 134 aa19.91■□□□□ 0.78
BRAT1-206ENST00000493232 ANO2Q9NQ90 1003 aa19.91■□□□□ 0.78
BRAT1-206ENST00000493232 VPS37DQ86XT2 251 aa19.9■□□□□ 0.78
BRAT1-206ENST00000493232 PDE4CQ08493 712 aa19.9■□□□□ 0.78
BRAT1-206ENST00000493232 TCEAL9Q9UHQ7 104 aa19.9■□□□□ 0.78
BRAT1-206ENST00000493232 CTDP1Q9Y5B0 961 aaPredicted RBP19.9■□□□□ 0.78
BRAT1-206ENST00000493232 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
BRAT1-206ENST00000493232 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.78
BRAT1-206ENST00000493232 FGD6Q6ZV73 1430 aa19.89■□□□□ 0.78
BRAT1-206ENST00000493232 APPP05067 770 aa19.89■□□□□ 0.77
BRAT1-206ENST00000493232 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
BRAT1-206ENST00000493232 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
BRAT1-206ENST00000493232 ERC2O15083 957 aa19.88■□□□□ 0.77
BRAT1-206ENST00000493232 HOOK1Q9UJC3 728 aaKnown RBP19.88■□□□□ 0.77
BRAT1-206ENST00000493232 ANKRD20A12PQ8NF67 263 aa19.87■□□□□ 0.77
BRAT1-206ENST00000493232 ARID3AQ99856 593 aa19.87■□□□□ 0.77
BRAT1-206ENST00000493232 IGF1RP08069 1367 aa19.87■□□□□ 0.77
BRAT1-206ENST00000493232 INTS3Q68E01 1043 aaKnown RBP19.86■□□□□ 0.77
BRAT1-206ENST00000493232 CCDC70Q6NSX1 233 aa19.86■□□□□ 0.77
BRAT1-206ENST00000493232 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
BRAT1-206ENST00000493232 ATF3P18847 181 aa19.86■□□□□ 0.77
BRAT1-206ENST00000493232 FAM69CQ0P6D2 419 aa19.85■□□□□ 0.77
BRAT1-206ENST00000493232 TNNT3P45378 269 aaPredicted RBP19.85■□□□□ 0.77
BRAT1-206ENST00000493232 NECTIN2Q92692 538 aa19.85■□□□□ 0.77
BRAT1-206ENST00000493232 ERICH2A1L162 156 aa19.85■□□□□ 0.77
BRAT1-206ENST00000493232 IPO7O95373 1038 aaKnown RBP19.84■□□□□ 0.77
BRAT1-206ENST00000493232 CCDC7Q96M83 1385 aa19.84■□□□□ 0.77
BRAT1-206ENST00000493232 MEX3CQ5U5Q3 659 aaKnown RBP19.83■□□□□ 0.77
BRAT1-206ENST00000493232 ANKRD50Q9ULJ7 1429 aa19.83■□□□□ 0.76
BRAT1-206ENST00000493232 DHX16O60231 1041 aaKnown RBP19.82■□□□□ 0.76
BRAT1-206ENST00000493232 CHMP5Q9NZZ3 219 aa19.82■□□□□ 0.76
BRAT1-206ENST00000493232 RAD21O60216 631 aa19.82■□□□□ 0.76
BRAT1-206ENST00000493232 FOXD4L6Q3SYB3 417 aaPredicted RBP19.82■□□□□ 0.76
BRAT1-206ENST00000493232 FOXD4L3Q6VB84 417 aaPredicted RBP19.82■□□□□ 0.76
BRAT1-206ENST00000493232 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
BRAT1-206ENST00000493232 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
BRAT1-206ENST00000493232 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
BRAT1-206ENST00000493232 WWC1Q8IX03 1113 aa19.8■□□□□ 0.76
BRAT1-206ENST00000493232 BICD2Q8TD16 824 aa19.8■□□□□ 0.76
BRAT1-206ENST00000493232 NUCB2P80303 420 aa19.8■□□□□ 0.76
BRAT1-206ENST00000493232 GSE1Q14687 1217 aa19.8■□□□□ 0.76
BRAT1-206ENST00000493232 FYCO1Q9BQS8 1478 aa19.8■□□□□ 0.76
BRAT1-206ENST00000493232 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
BRAT1-206ENST00000493232 GPS2Q13227 327 aa19.79■□□□□ 0.76
BRAT1-206ENST00000493232 SMC3Q9UQE7 1217 aa19.79■□□□□ 0.76
BRAT1-206ENST00000493232 SAFBQ15424 915 aaKnown RBP eCLIP19.79■□□□□ 0.76
BRAT1-206ENST00000493232 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
BRAT1-206ENST00000493232 SLC4A3P48751 1232 aa19.78■□□□□ 0.76
BRAT1-206ENST00000493232 RBM33Q96EV2 1170 aaKnown RBP19.78■□□□□ 0.76
BRAT1-206ENST00000493232 PCMTD1Q96MG8 357 aaPredicted RBP19.78■□□□□ 0.76
BRAT1-206ENST00000493232 CNTLNQ9NXG0 1405 aa19.78■□□□□ 0.76
BRAT1-206ENST00000493232 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
BRAT1-206ENST00000493232 HMOX1P09601 288 aa19.77■□□□□ 0.76
BRAT1-206ENST00000493232 CCAR2Q8N163 923 aaKnown RBP19.77■□□□□ 0.76
BRAT1-206ENST00000493232 RALYLQ86SE5 291 aaKnown RBP19.77■□□□□ 0.76
BRAT1-206ENST00000493232 GGNBP2Q9H3C7 697 aa19.77■□□□□ 0.76
BRAT1-206ENST00000493232 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
BRAT1-206ENST00000493232 UBTFL1P0CB47 393 aaPredicted RBP19.76■□□□□ 0.75
BRAT1-206ENST00000493232 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
BRAT1-206ENST00000493232 NINLQ9Y2I6 1382 aa19.75■□□□□ 0.75
BRAT1-206ENST00000493232 BRD4O60885 1362 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms