RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
TOM1-215ENST00000491987 SPHKAPQ2M3C7 1700 aa22.65■■□□□ 1.22
TOM1-215ENST00000491987 PIP4K2BP78356 416 aa22.64■■□□□ 1.21
TOM1-215ENST00000491987 BCANQ96GW7 911 aa22.64■■□□□ 1.21
TOM1-215ENST00000491987 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
TOM1-215ENST00000491987 PLEKHG1Q9ULL1 1385 aa22.62■■□□□ 1.21
TOM1-215ENST00000491987 ALKQ9UM73 1620 aa22.61■■□□□ 1.21
TOM1-215ENST00000491987 HDGFP51858 240 aaKnown RBP22.61■■□□□ 1.21
TOM1-215ENST00000491987 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
TOM1-215ENST00000491987 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
TOM1-215ENST00000491987 KCNA6P17658 529 aa22.58■■□□□ 1.21
TOM1-215ENST00000491987 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.58■■□□□ 1.21
TOM1-215ENST00000491987 XIRP1Q702N8 1843 aaKnown RBP22.57■■□□□ 1.2
TOM1-215ENST00000491987 NWD1Q149M9 1564 aa22.57■■□□□ 1.2
TOM1-215ENST00000491987 TRPM2O94759 1503 aa22.56■■□□□ 1.2
TOM1-215ENST00000491987 CLTCL1P53675 1640 aa22.55■■□□□ 1.2
TOM1-215ENST00000491987 TMEM94Q12767 1356 aa22.54■■□□□ 1.2
TOM1-215ENST00000491987 HSPA1LP34931 641 aa22.53■■□□□ 1.2
TOM1-215ENST00000491987 NKTRP30414 1462 aaKnown RBP22.53■■□□□ 1.2
TOM1-215ENST00000491987 ADAMTS13Q76LX8 1427 aa22.51■■□□□ 1.19
TOM1-215ENST00000491987 PROSER2Q86WR7 435 aaPredicted RBP22.51■■□□□ 1.19
TOM1-215ENST00000491987 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
TOM1-215ENST00000491987 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
TOM1-215ENST00000491987 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
TOM1-215ENST00000491987 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
TOM1-215ENST00000491987 TBX22Q9Y458 520 aa22.5■■□□□ 1.19
TOM1-215ENST00000491987 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
TOM1-215ENST00000491987 CHD2O14647 1828 aaKnown RBP22.49■■□□□ 1.19
TOM1-215ENST00000491987 KIF1BO60333 1816 aa22.45■■□□□ 1.18
TOM1-215ENST00000491987 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
TOM1-215ENST00000491987 NRXN3Q9Y4C0 1643 aa22.44■■□□□ 1.18
TOM1-215ENST00000491987 SETBP1Q9Y6X0 1596 aa22.42■■□□□ 1.18
TOM1-215ENST00000491987 PIK3R4Q99570 1358 aa22.42■■□□□ 1.18
TOM1-215ENST00000491987 FOXD1Q16676 465 aa22.42■■□□□ 1.18
TOM1-215ENST00000491987 MSH6P52701 1360 aa22.4■■□□□ 1.18
TOM1-215ENST00000491987 PTPRUQ92729 1446 aa22.39■■□□□ 1.17
TOM1-215ENST00000491987 SETD5Q9C0A6 1442 aa22.38■■□□□ 1.17
TOM1-215ENST00000491987 MPHOSPH9Q99550 1183 aa22.37■■□□□ 1.17
TOM1-215ENST00000491987 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
TOM1-215ENST00000491987 FAM135BQ49AJ0 1406 aa22.36■■□□□ 1.17
TOM1-215ENST00000491987 MED1Q15648 1581 aaPredicted RBP22.34■■□□□ 1.17
TOM1-215ENST00000491987 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
TOM1-215ENST00000491987 C14orf37Q86TY3 774 aa22.34■■□□□ 1.17
TOM1-215ENST00000491987 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
TOM1-215ENST00000491987 CCDC144AA2RUR9 1427 aa22.33■■□□□ 1.17
TOM1-215ENST00000491987 NCOA3Q9Y6Q9 1424 aa22.33■■□□□ 1.17
TOM1-215ENST00000491987 METP08581 1390 aa22.33■■□□□ 1.17
TOM1-215ENST00000491987 ILDR2Q71H61 639 aa22.32■■□□□ 1.16
TOM1-215ENST00000491987 RAB3GAP2Q9H2M9 1393 aa22.3■■□□□ 1.16
TOM1-215ENST00000491987 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
TOM1-215ENST00000491987 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
TOM1-215ENST00000491987 SLAIN2Q9P270 581 aa22.29■■□□□ 1.16
TOM1-215ENST00000491987 PPLO60437 1756 aa22.29■■□□□ 1.16
TOM1-215ENST00000491987 ACIN1Q9UKV3 1341 aaKnown RBP22.29■■□□□ 1.16
TOM1-215ENST00000491987 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
TOM1-215ENST00000491987 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
TOM1-215ENST00000491987 SETD1AO15047 1707 aaKnown RBP22.26■■□□□ 1.15
TOM1-215ENST00000491987 SPATA31E1Q6ZUB1 1445 aa22.25■■□□□ 1.15
TOM1-215ENST00000491987 ATF3P18847 181 aa22.24■■□□□ 1.15
TOM1-215ENST00000491987 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
TOM1-215ENST00000491987 CADPS2Q86UW7 1296 aa22.24■■□□□ 1.15
TOM1-215ENST00000491987 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
TOM1-215ENST00000491987 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
TOM1-215ENST00000491987 ADGRF5Q8IZF2 1346 aa22.2■■□□□ 1.14
TOM1-215ENST00000491987 DCCP43146 1447 aa22.2■■□□□ 1.14
TOM1-215ENST00000491987 PTCH1Q13635 1447 aa22.18■■□□□ 1.14
TOM1-215ENST00000491987 ADGRL3Q9HAR2 1447 aa22.18■■□□□ 1.14
TOM1-215ENST00000491987 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
TOM1-215ENST00000491987 NALCNQ8IZF0 1738 aa22.17■■□□□ 1.14
TOM1-215ENST00000491987 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
TOM1-215ENST00000491987 ROBO2Q9HCK4 1378 aa22.16■■□□□ 1.14
TOM1-215ENST00000491987 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.14
TOM1-215ENST00000491987 COL16A1Q07092 1604 aaPredicted RBP22.14■■□□□ 1.14
TOM1-215ENST00000491987 MST1RQ04912 1400 aa22.14■■□□□ 1.13
TOM1-215ENST00000491987 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
TOM1-215ENST00000491987 BRINP3Q76B58 766 aa22.12■■□□□ 1.13
TOM1-215ENST00000491987 PIK3C2GO75747 1445 aa22.11■■□□□ 1.13
TOM1-215ENST00000491987 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
TOM1-215ENST00000491987 SOCS7O14512 581 aa22.1■■□□□ 1.13
TOM1-215ENST00000491987 JCADQ9P266 1359 aa22.1■■□□□ 1.13
TOM1-215ENST00000491987 HRCP23327 699 aa22.09■■□□□ 1.13
TOM1-215ENST00000491987 STK26Q9P289 416 aa22.07■■□□□ 1.12
TOM1-215ENST00000491987 MYOM2P54296 1465 aa22.07■■□□□ 1.12
TOM1-215ENST00000491987 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
TOM1-215ENST00000491987 NRXN1Q9ULB1 1477 aa22.05■■□□□ 1.12
TOM1-215ENST00000491987 LRPPRCP42704 1394 aaKnown RBP22.05■■□□□ 1.12
TOM1-215ENST00000491987 NHSL1Q5SYE7 1610 aa22.04■■□□□ 1.12
TOM1-215ENST00000491987 TECPR2O15040 1411 aa22.04■■□□□ 1.12
TOM1-215ENST00000491987 C1orf167Q5SNV9 1468 aa22.03■■□□□ 1.12
TOM1-215ENST00000491987 KNDC1Q76NI1 1749 aa22.03■■□□□ 1.12
TOM1-215ENST00000491987 LAMC1P11047 1609 aa22.02■■□□□ 1.11
TOM1-215ENST00000491987 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
TOM1-215ENST00000491987 ABCC11Q96J66 1382 aa22.01■■□□□ 1.11
TOM1-215ENST00000491987 YTHDC2Q9H6S0 1430 aaKnown RBP22.01■■□□□ 1.11
TOM1-215ENST00000491987 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
TOM1-215ENST00000491987 RGS17Q9UGC6 210 aaPredicted RBP22.01■■□□□ 1.11
TOM1-215ENST00000491987 CDC42BPGQ6DT37 1551 aa22■■□□□ 1.11
TOM1-215ENST00000491987 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
TOM1-215ENST00000491987 WAPLQ7Z5K2 1190 aa22■■□□□ 1.11
TOM1-215ENST00000491987 DDX17Q92841 729 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms