RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 NAIPQ13075 1403 aa13.11□□□□□ -0.31
GABRE-211ENST00000491339 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
GABRE-211ENST00000491339 KIF1BO60333 1816 aa13.08□□□□□ -0.32
GABRE-211ENST00000491339 LTKP29376 864 aa13.08□□□□□ -0.32
GABRE-211ENST00000491339 TRPM2O94759 1503 aa13.07□□□□□ -0.32
GABRE-211ENST00000491339 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
GABRE-211ENST00000491339 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
GABRE-211ENST00000491339 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
GABRE-211ENST00000491339 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
GABRE-211ENST00000491339 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
GABRE-211ENST00000491339 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
GABRE-211ENST00000491339 HDGFP51858 240 aaKnown RBP13.06□□□□□ -0.32
GABRE-211ENST00000491339 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
GABRE-211ENST00000491339 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
GABRE-211ENST00000491339 NKTRP30414 1462 aaKnown RBP13.05□□□□□ -0.32
GABRE-211ENST00000491339 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
GABRE-211ENST00000491339 CLTCL1P53675 1640 aa13.05□□□□□ -0.32
GABRE-211ENST00000491339 TOM1O60784 492 aa13.04□□□□□ -0.32
GABRE-211ENST00000491339 BCANQ96GW7 911 aa13.04□□□□□ -0.32
GABRE-211ENST00000491339 CHD2O14647 1828 aaKnown RBP13.03□□□□□ -0.32
GABRE-211ENST00000491339 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
GABRE-211ENST00000491339 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
GABRE-211ENST00000491339 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
GABRE-211ENST00000491339 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
GABRE-211ENST00000491339 SLC26A8Q96RN1 970 aa12.99□□□□□ -0.33
GABRE-211ENST00000491339 ALKQ9UM73 1620 aa12.99□□□□□ -0.33
GABRE-211ENST00000491339 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
GABRE-211ENST00000491339 KCNA6P17658 529 aa12.98□□□□□ -0.33
GABRE-211ENST00000491339 NEXMIFQ5QGS0 1516 aa12.97□□□□□ -0.33
GABRE-211ENST00000491339 ACIN1Q9UKV3 1341 aaKnown RBP12.97□□□□□ -0.33
GABRE-211ENST00000491339 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
GABRE-211ENST00000491339 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
GABRE-211ENST00000491339 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.33
GABRE-211ENST00000491339 TMEM94Q12767 1356 aa12.96□□□□□ -0.34
GABRE-211ENST00000491339 PPLO60437 1756 aa12.95□□□□□ -0.34
GABRE-211ENST00000491339 PIK3R4Q99570 1358 aa12.95□□□□□ -0.34
GABRE-211ENST00000491339 ADAMTS13Q76LX8 1427 aa12.95□□□□□ -0.34
GABRE-211ENST00000491339 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
GABRE-211ENST00000491339 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
GABRE-211ENST00000491339 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
GABRE-211ENST00000491339 MSH6P52701 1360 aa12.93□□□□□ -0.34
GABRE-211ENST00000491339 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
GABRE-211ENST00000491339 DISP3Q9P2K9 1392 aa12.93□□□□□ -0.34
GABRE-211ENST00000491339 ROBO1Q9Y6N7 1651 aa12.92□□□□□ -0.34
GABRE-211ENST00000491339 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
GABRE-211ENST00000491339 SETD5Q9C0A6 1442 aa12.92□□□□□ -0.34
GABRE-211ENST00000491339 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
GABRE-211ENST00000491339 HSPA1LP34931 641 aa12.9□□□□□ -0.34
GABRE-211ENST00000491339 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
GABRE-211ENST00000491339 SETD1AO15047 1707 aaKnown RBP12.9□□□□□ -0.34
GABRE-211ENST00000491339 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
GABRE-211ENST00000491339 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
GABRE-211ENST00000491339 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
GABRE-211ENST00000491339 RPGRIP1LQ68CZ1 1315 aa12.87□□□□□ -0.35
GABRE-211ENST00000491339 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
GABRE-211ENST00000491339 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
GABRE-211ENST00000491339 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
GABRE-211ENST00000491339 MPHOSPH9Q99550 1183 aa12.86□□□□□ -0.35
GABRE-211ENST00000491339 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
GABRE-211ENST00000491339 PTPRUQ92729 1446 aa12.85□□□□□ -0.35
GABRE-211ENST00000491339 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
GABRE-211ENST00000491339 DCCP43146 1447 aa12.85□□□□□ -0.35
GABRE-211ENST00000491339 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
GABRE-211ENST00000491339 AMOTL2Q9Y2J4 779 aa12.84□□□□□ -0.35
GABRE-211ENST00000491339 LAMC1P11047 1609 aa12.84□□□□□ -0.35
GABRE-211ENST00000491339 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
GABRE-211ENST00000491339 METP08581 1390 aa12.83□□□□□ -0.36
GABRE-211ENST00000491339 KNDC1Q76NI1 1749 aa12.82□□□□□ -0.36
GABRE-211ENST00000491339 SPATA31E1Q6ZUB1 1445 aa12.82□□□□□ -0.36
GABRE-211ENST00000491339 ATF3P18847 181 aa12.82□□□□□ -0.36
GABRE-211ENST00000491339 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
GABRE-211ENST00000491339 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
GABRE-211ENST00000491339 ADGRL3Q9HAR2 1447 aa12.81□□□□□ -0.36
GABRE-211ENST00000491339 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
GABRE-211ENST00000491339 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
GABRE-211ENST00000491339 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
GABRE-211ENST00000491339 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
GABRE-211ENST00000491339 SLAIN2Q9P270 581 aa12.79□□□□□ -0.36
GABRE-211ENST00000491339 MYOM2P54296 1465 aa12.78□□□□□ -0.36
GABRE-211ENST00000491339 NHSL1Q5SYE7 1610 aa12.78□□□□□ -0.36
GABRE-211ENST00000491339 PIK3C2GO75747 1445 aa12.77□□□□□ -0.36
GABRE-211ENST00000491339 SHPRHQ149N8 1683 aa12.77□□□□□ -0.37
GABRE-211ENST00000491339 RGL3Q3MIN7 710 aa12.77□□□□□ -0.37
GABRE-211ENST00000491339 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.37
GABRE-211ENST00000491339 MST1RQ04912 1400 aa12.75□□□□□ -0.37
GABRE-211ENST00000491339 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
GABRE-211ENST00000491339 HRCP23327 699 aa12.74□□□□□ -0.37
GABRE-211ENST00000491339 JCADQ9P266 1359 aa12.74□□□□□ -0.37
GABRE-211ENST00000491339 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
GABRE-211ENST00000491339 ROBO2Q9HCK4 1378 aa12.73□□□□□ -0.37
GABRE-211ENST00000491339 NRXN1Q9ULB1 1477 aa12.73□□□□□ -0.37
GABRE-211ENST00000491339 TECPR2O15040 1411 aa12.73□□□□□ -0.37
GABRE-211ENST00000491339 ILDR2Q71H61 639 aa12.71□□□□□ -0.37
GABRE-211ENST00000491339 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.37
GABRE-211ENST00000491339 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
GABRE-211ENST00000491339 YTHDC2Q9H6S0 1430 aaKnown RBP12.69□□□□□ -0.38
GABRE-211ENST00000491339 C1orf167Q5SNV9 1468 aa12.69□□□□□ -0.38
GABRE-211ENST00000491339 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
GABRE-211ENST00000491339 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
GABRE-211ENST00000491339 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms