RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 EID1Q9Y6B2 187 aa22.95■■□□□ 1.26
C9orf43-203ENST00000490544 LTBP4Q8N2S1 1624 aa22.93■■□□□ 1.26
C9orf43-203ENST00000490544 MED14O60244 1454 aa22.92■■□□□ 1.26
C9orf43-203ENST00000490544 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
C9orf43-203ENST00000490544 LTKP29376 864 aa22.9■■□□□ 1.26
C9orf43-203ENST00000490544 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
C9orf43-203ENST00000490544 RIMS2Q9UQ26 1411 aa22.9■■□□□ 1.26
C9orf43-203ENST00000490544 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.25
C9orf43-203ENST00000490544 ZNF326Q5BKZ1 582 aaKnown RBP22.89■■□□□ 1.25
C9orf43-203ENST00000490544 BCANQ96GW7 911 aa22.88■■□□□ 1.25
C9orf43-203ENST00000490544 NUTM2DQ5VT03 806 aaPredicted RBP22.87■■□□□ 1.25
C9orf43-203ENST00000490544 CCDC144AA2RUR9 1427 aa22.87■■□□□ 1.25
C9orf43-203ENST00000490544 ZFYVE9O95405 1425 aa22.86■■□□□ 1.25
C9orf43-203ENST00000490544 ZNF335Q9H4Z2 1342 aaPredicted RBP22.85■■□□□ 1.25
C9orf43-203ENST00000490544 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
C9orf43-203ENST00000490544 HRCP23327 699 aa22.84■■□□□ 1.25
C9orf43-203ENST00000490544 HDGFP51858 240 aaKnown RBP22.83■■□□□ 1.25
C9orf43-203ENST00000490544 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.81■■□□□ 1.24
C9orf43-203ENST00000490544 PPLO60437 1756 aa22.81■■□□□ 1.24
C9orf43-203ENST00000490544 NEXMIFQ5QGS0 1516 aa22.8■■□□□ 1.24
C9orf43-203ENST00000490544 STRCP1A6NGW2 1772 aa22.8■■□□□ 1.24
C9orf43-203ENST00000490544 PLEKHG1Q9ULL1 1385 aa22.77■■□□□ 1.24
C9orf43-203ENST00000490544 SLC26A8Q96RN1 970 aa22.77■■□□□ 1.24
C9orf43-203ENST00000490544 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
C9orf43-203ENST00000490544 RGL3Q3MIN7 710 aa22.74■■□□□ 1.23
C9orf43-203ENST00000490544 CPS1P31327 1500 aa22.73■■□□□ 1.23
C9orf43-203ENST00000490544 DIP2AQ14689 1571 aa22.72■■□□□ 1.23
C9orf43-203ENST00000490544 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
C9orf43-203ENST00000490544 ANKRD30BQ9BXX2 1392 aa22.71■■□□□ 1.23
C9orf43-203ENST00000490544 SPATA31E1Q6ZUB1 1445 aa22.7■■□□□ 1.22
C9orf43-203ENST00000490544 SETBP1Q9Y6X0 1596 aa22.7■■□□□ 1.22
C9orf43-203ENST00000490544 CHD2O14647 1828 aaKnown RBP22.7■■□□□ 1.22
C9orf43-203ENST00000490544 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
C9orf43-203ENST00000490544 ADAMTS13Q76LX8 1427 aa22.66■■□□□ 1.22
C9orf43-203ENST00000490544 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
C9orf43-203ENST00000490544 NWD1Q149M9 1564 aa22.65■■□□□ 1.22
C9orf43-203ENST00000490544 VGFO15240 615 aaPredicted RBP22.65■■□□□ 1.22
C9orf43-203ENST00000490544 XIRP1Q702N8 1843 aaKnown RBP22.64■■□□□ 1.22
C9orf43-203ENST00000490544 PCGF6Q9BYE7 350 aa22.63■■□□□ 1.21
C9orf43-203ENST00000490544 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
C9orf43-203ENST00000490544 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
C9orf43-203ENST00000490544 PIP4K2BP78356 416 aa22.61■■□□□ 1.21
C9orf43-203ENST00000490544 MED1Q15648 1581 aaPredicted RBP22.61■■□□□ 1.21
C9orf43-203ENST00000490544 TBX22Q9Y458 520 aa22.61■■□□□ 1.21
C9orf43-203ENST00000490544 KCNA6P17658 529 aa22.6■■□□□ 1.21
C9orf43-203ENST00000490544 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
C9orf43-203ENST00000490544 HSPA1LP34931 641 aa22.59■■□□□ 1.21
C9orf43-203ENST00000490544 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
C9orf43-203ENST00000490544 ADGRF5Q8IZF2 1346 aa22.58■■□□□ 1.21
C9orf43-203ENST00000490544 TOM1O60784 492 aa22.58■■□□□ 1.21
C9orf43-203ENST00000490544 DHX57Q6P158 1386 aaKnown RBP22.58■■□□□ 1.21
C9orf43-203ENST00000490544 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
C9orf43-203ENST00000490544 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
C9orf43-203ENST00000490544 PROSER2Q86WR7 435 aaPredicted RBP22.56■■□□□ 1.2
C9orf43-203ENST00000490544 METP08581 1390 aa22.55■■□□□ 1.2
C9orf43-203ENST00000490544 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
C9orf43-203ENST00000490544 RBM33Q96EV2 1170 aaKnown RBP22.55■■□□□ 1.2
C9orf43-203ENST00000490544 MYOM2P54296 1465 aa22.54■■□□□ 1.2
C9orf43-203ENST00000490544 LAMC1P11047 1609 aa22.53■■□□□ 1.2
C9orf43-203ENST00000490544 KDM2AQ9Y2K7 1162 aa22.53■■□□□ 1.2
C9orf43-203ENST00000490544 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
C9orf43-203ENST00000490544 TMEM94Q12767 1356 aa22.52■■□□□ 1.2
C9orf43-203ENST00000490544 PIK3C2GO75747 1445 aa22.52■■□□□ 1.2
C9orf43-203ENST00000490544 AMOTL2Q9Y2J4 779 aa22.52■■□□□ 1.2
C9orf43-203ENST00000490544 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
C9orf43-203ENST00000490544 NEUROD1Q13562 356 aa22.5■■□□□ 1.19
C9orf43-203ENST00000490544 C14orf37Q86TY3 774 aa22.49■■□□□ 1.19
C9orf43-203ENST00000490544 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
C9orf43-203ENST00000490544 NRXN1Q9ULB1 1477 aa22.47■■□□□ 1.19
C9orf43-203ENST00000490544 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
C9orf43-203ENST00000490544 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
C9orf43-203ENST00000490544 MSH6P52701 1360 aa22.43■■□□□ 1.18
C9orf43-203ENST00000490544 STK26Q9P289 416 aa22.43■■□□□ 1.18
C9orf43-203ENST00000490544 NALCNQ8IZF0 1738 aa22.43■■□□□ 1.18
C9orf43-203ENST00000490544 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
C9orf43-203ENST00000490544 CFAP70Q5T0N1 1121 aa22.42■■□□□ 1.18
C9orf43-203ENST00000490544 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
C9orf43-203ENST00000490544 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.17
C9orf43-203ENST00000490544 PTCH1Q13635 1447 aa22.39■■□□□ 1.17
C9orf43-203ENST00000490544 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
C9orf43-203ENST00000490544 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
C9orf43-203ENST00000490544 STAC3Q96MF2 364 aa22.36■■□□□ 1.17
C9orf43-203ENST00000490544 NCOA3Q9Y6Q9 1424 aa22.36■■□□□ 1.17
C9orf43-203ENST00000490544 KIAA1210Q9ULL0 1709 aa22.36■■□□□ 1.17
C9orf43-203ENST00000490544 LRPPRCP42704 1394 aaKnown RBP22.36■■□□□ 1.17
C9orf43-203ENST00000490544 L3MBTL2Q969R5 705 aa22.35■■□□□ 1.17
C9orf43-203ENST00000490544 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.17
C9orf43-203ENST00000490544 ATF3P18847 181 aa22.33■■□□□ 1.17
C9orf43-203ENST00000490544 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
C9orf43-203ENST00000490544 ADGRB1O14514 1584 aa22.33■■□□□ 1.16
C9orf43-203ENST00000490544 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
C9orf43-203ENST00000490544 C19orf44Q9H6X5 657 aa22.32■■□□□ 1.16
C9orf43-203ENST00000490544 ADGRL3Q9HAR2 1447 aa22.31■■□□□ 1.16
C9orf43-203ENST00000490544 TECPR2O15040 1411 aa22.31■■□□□ 1.16
C9orf43-203ENST00000490544 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
C9orf43-203ENST00000490544 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
C9orf43-203ENST00000490544 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
C9orf43-203ENST00000490544 WAPLQ7Z5K2 1190 aa22.28■■□□□ 1.16
C9orf43-203ENST00000490544 CADPS2Q86UW7 1296 aa22.28■■□□□ 1.16
C9orf43-203ENST00000490544 DCCP43146 1447 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms