RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 HFM1A2PYH4 1435 aa27.77■■■□□ 2.04
COL9A2-209ENST00000490132 PIP4K2BP78356 416 aa27.77■■■□□ 2.04
COL9A2-209ENST00000490132 CHGAP10645 457 aaKnown RBP27.76■■■□□ 2.03
COL9A2-209ENST00000490132 SCAF1Q9H7N4 1312 aaKnown RBP27.75■■■□□ 2.03
COL9A2-209ENST00000490132 PLEKHG1Q9ULL1 1385 aa27.74■■■□□ 2.03
COL9A2-209ENST00000490132 NWD1Q149M9 1564 aa27.73■■■□□ 2.03
COL9A2-209ENST00000490132 SENP3Q9H4L4 574 aaPredicted RBP27.73■■■□□ 2.03
COL9A2-209ENST00000490132 PPP1R15AO75807 674 aaPredicted RBP27.7■■■□□ 2.02
COL9A2-209ENST00000490132 KCNA6P17658 529 aa27.7■■■□□ 2.02
COL9A2-209ENST00000490132 BCANQ96GW7 911 aa27.69■■■□□ 2.02
COL9A2-209ENST00000490132 CLTCL1P53675 1640 aa27.68■■■□□ 2.02
COL9A2-209ENST00000490132 HDGFP51858 240 aaKnown RBP27.68■■■□□ 2.02
COL9A2-209ENST00000490132 CHD2O14647 1828 aaKnown RBP27.68■■■□□ 2.02
COL9A2-209ENST00000490132 HSPA1LP34931 641 aa27.67■■■□□ 2.02
COL9A2-209ENST00000490132 NUTM2DQ5VT03 806 aaPredicted RBP27.67■■■□□ 2.02
COL9A2-209ENST00000490132 NKTRP30414 1462 aaKnown RBP27.66■■■□□ 2.02
COL9A2-209ENST00000490132 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.66■■■□□ 2.02
COL9A2-209ENST00000490132 TRPM2O94759 1503 aa27.66■■■□□ 2.02
COL9A2-209ENST00000490132 TMEM94Q12767 1356 aa27.65■■■□□ 2.02
COL9A2-209ENST00000490132 DISP3Q9P2K9 1392 aa27.65■■■□□ 2.02
COL9A2-209ENST00000490132 ADAMTS13Q76LX8 1427 aa27.65■■■□□ 2.02
COL9A2-209ENST00000490132 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
COL9A2-209ENST00000490132 DIP2AQ14689 1571 aa27.61■■■□□ 2.01
COL9A2-209ENST00000490132 PROSER2Q86WR7 435 aaPredicted RBP27.6■■■□□ 2.01
COL9A2-209ENST00000490132 RBM33Q96EV2 1170 aaKnown RBP27.6■■■□□ 2.01
COL9A2-209ENST00000490132 TBX22Q9Y458 520 aa27.59■■■□□ 2.01
COL9A2-209ENST00000490132 KIF1BO60333 1816 aa27.59■■■□□ 2.01
COL9A2-209ENST00000490132 NRXN3Q9Y4C0 1643 aa27.58■■■□□ 2.01
COL9A2-209ENST00000490132 NEXMIFQ5QGS0 1516 aa27.55■■■□□ 2
COL9A2-209ENST00000490132 SLC4A1APQ9BWU0 796 aaKnown RBP27.54■■■□□ 2
COL9A2-209ENST00000490132 SETBP1Q9Y6X0 1596 aa27.54■■■□□ 2
COL9A2-209ENST00000490132 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
COL9A2-209ENST00000490132 PIK3R4Q99570 1358 aa27.51■■□□□ 1.99
COL9A2-209ENST00000490132 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
COL9A2-209ENST00000490132 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
COL9A2-209ENST00000490132 ILDR2Q71H61 639 aa27.48■■□□□ 1.99
COL9A2-209ENST00000490132 MSH6P52701 1360 aa27.48■■□□□ 1.99
COL9A2-209ENST00000490132 FAM135BQ49AJ0 1406 aa27.47■■□□□ 1.99
COL9A2-209ENST00000490132 ROBO1Q9Y6N7 1651 aa27.46■■□□□ 1.99
COL9A2-209ENST00000490132 XRN1Q8IZH2 1706 aaKnown RBP27.45■■□□□ 1.99
COL9A2-209ENST00000490132 FOXD1Q16676 465 aa27.45■■□□□ 1.98
COL9A2-209ENST00000490132 NCOA3Q9Y6Q9 1424 aa27.42■■□□□ 1.98
COL9A2-209ENST00000490132 METP08581 1390 aa27.41■■□□□ 1.98
COL9A2-209ENST00000490132 AMOTL2Q9Y2J4 779 aa27.41■■□□□ 1.98
COL9A2-209ENST00000490132 PPLO60437 1756 aa27.4■■□□□ 1.98
COL9A2-209ENST00000490132 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.4■■□□□ 1.98
COL9A2-209ENST00000490132 MPHOSPH9Q99550 1183 aa27.39■■□□□ 1.98
COL9A2-209ENST00000490132 SETD1AO15047 1707 aaKnown RBP27.38■■□□□ 1.97
COL9A2-209ENST00000490132 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
COL9A2-209ENST00000490132 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
COL9A2-209ENST00000490132 C14orf37Q86TY3 774 aa27.34■■□□□ 1.97
COL9A2-209ENST00000490132 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.97
COL9A2-209ENST00000490132 RPGRIP1LQ68CZ1 1315 aa27.33■■□□□ 1.97
COL9A2-209ENST00000490132 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
COL9A2-209ENST00000490132 C19orf44Q9H6X5 657 aa27.31■■□□□ 1.96
COL9A2-209ENST00000490132 RAB3GAP2Q9H2M9 1393 aa27.3■■□□□ 1.96
COL9A2-209ENST00000490132 SPATA31E1Q6ZUB1 1445 aa27.3■■□□□ 1.96
COL9A2-209ENST00000490132 PHLPP1O60346 1717 aa27.3■■□□□ 1.96
COL9A2-209ENST00000490132 IFT172Q9UG01 1749 aa27.3■■□□□ 1.96
COL9A2-209ENST00000490132 CADPS2Q86UW7 1296 aa27.27■■□□□ 1.96
COL9A2-209ENST00000490132 DCCP43146 1447 aa27.25■■□□□ 1.95
COL9A2-209ENST00000490132 NALCNQ8IZF0 1738 aa27.25■■□□□ 1.95
COL9A2-209ENST00000490132 ACIN1Q9UKV3 1341 aaKnown RBP27.25■■□□□ 1.95
COL9A2-209ENST00000490132 ATF3P18847 181 aa27.25■■□□□ 1.95
COL9A2-209ENST00000490132 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
COL9A2-209ENST00000490132 RGL3Q3MIN7 710 aa27.22■■□□□ 1.95
COL9A2-209ENST00000490132 PTCH1Q13635 1447 aa27.21■■□□□ 1.95
COL9A2-209ENST00000490132 ADGRL3Q9HAR2 1447 aa27.21■■□□□ 1.95
COL9A2-209ENST00000490132 ADGRF5Q8IZF2 1346 aa27.2■■□□□ 1.95
COL9A2-209ENST00000490132 PRAG1Q86YV5 1406 aa27.2■■□□□ 1.94
COL9A2-209ENST00000490132 AHDC1Q5TGY3 1603 aaPredicted RBP27.19■■□□□ 1.94
COL9A2-209ENST00000490132 SOCS7O14512 581 aa27.19■■□□□ 1.94
COL9A2-209ENST00000490132 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
COL9A2-209ENST00000490132 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
COL9A2-209ENST00000490132 MST1RQ04912 1400 aa27.18■■□□□ 1.94
COL9A2-209ENST00000490132 ANKRD30BQ9BXX2 1392 aa27.17■■□□□ 1.94
COL9A2-209ENST00000490132 BRINP3Q76B58 766 aa27.15■■□□□ 1.94
COL9A2-209ENST00000490132 ASXL1Q8IXJ9 1541 aa27.14■■□□□ 1.94
COL9A2-209ENST00000490132 JCADQ9P266 1359 aa27.12■■□□□ 1.93
COL9A2-209ENST00000490132 PIK3C2GO75747 1445 aa27.12■■□□□ 1.93
COL9A2-209ENST00000490132 NHSL1Q5SYE7 1610 aa27.1■■□□□ 1.93
COL9A2-209ENST00000490132 RGS17Q9UGC6 210 aaPredicted RBP27.1■■□□□ 1.93
COL9A2-209ENST00000490132 SHPRHQ149N8 1683 aa27.07■■□□□ 1.92
COL9A2-209ENST00000490132 KNDC1Q76NI1 1749 aa27.07■■□□□ 1.92
COL9A2-209ENST00000490132 MYOM2P54296 1465 aa27.06■■□□□ 1.92
COL9A2-209ENST00000490132 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
COL9A2-209ENST00000490132 TECPR2O15040 1411 aa27.05■■□□□ 1.92
COL9A2-209ENST00000490132 C1orf167Q5SNV9 1468 aa27.05■■□□□ 1.92
COL9A2-209ENST00000490132 HRCP23327 699 aa27.04■■□□□ 1.92
COL9A2-209ENST00000490132 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
COL9A2-209ENST00000490132 LRP6O75581 1613 aa27.02■■□□□ 1.92
COL9A2-209ENST00000490132 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
COL9A2-209ENST00000490132 STK26Q9P289 416 aa27.01■■□□□ 1.91
COL9A2-209ENST00000490132 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.91
COL9A2-209ENST00000490132 LAMC1P11047 1609 aa27■■□□□ 1.91
COL9A2-209ENST00000490132 ABCC11Q96J66 1382 aa26.99■■□□□ 1.91
COL9A2-209ENST00000490132 DDX17Q92841 729 aaKnown RBP26.99■■□□□ 1.91
COL9A2-209ENST00000490132 YTHDC2Q9H6S0 1430 aaKnown RBP26.99■■□□□ 1.91
COL9A2-209ENST00000490132 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
COL9A2-209ENST00000490132 SPATA31A6Q5VVP1 1343 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms