RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 KIF1BO60333 1816 aa33.75■■■□□ 2.99
LSM10-203ENST00000489912 BCANQ96GW7 911 aa33.75■■■□□ 2.99
LSM10-203ENST00000489912 NUTM2DQ5VT03 806 aaPredicted RBP33.74■■■□□ 2.99
LSM10-203ENST00000489912 ILDR1Q86SU0 546 aaPredicted RBP33.74■■■□□ 2.99
LSM10-203ENST00000489912 ZFYVE9O95405 1425 aa33.73■■■□□ 2.99
LSM10-203ENST00000489912 ZNF326Q5BKZ1 582 aaKnown RBP33.71■■■□□ 2.99
LSM10-203ENST00000489912 ACIN1Q9UKV3 1341 aaKnown RBP33.71■■■□□ 2.99
LSM10-203ENST00000489912 HDGFP51858 240 aaKnown RBP33.69■■■□□ 2.98
LSM10-203ENST00000489912 FBXO41Q8TF61 875 aa33.67■■■□□ 2.98
LSM10-203ENST00000489912 STRCP1A6NGW2 1772 aa33.66■■■□□ 2.98
LSM10-203ENST00000489912 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.66■■■□□ 2.98
LSM10-203ENST00000489912 SLC26A8Q96RN1 970 aa33.66■■■□□ 2.98
LSM10-203ENST00000489912 CPS1P31327 1500 aa33.62■■■□□ 2.97
LSM10-203ENST00000489912 PLEKHG1Q9ULL1 1385 aa33.61■■■□□ 2.97
LSM10-203ENST00000489912 CCDC144AA2RUR9 1427 aa33.58■■■□□ 2.97
LSM10-203ENST00000489912 IQSEC2Q5JU85 1478 aa33.55■■■□□ 2.96
LSM10-203ENST00000489912 NEXMIFQ5QGS0 1516 aa33.54■■■□□ 2.96
LSM10-203ENST00000489912 HRCP23327 699 aa33.53■■■□□ 2.96
LSM10-203ENST00000489912 RGL3Q3MIN7 710 aa33.47■■■□□ 2.95
LSM10-203ENST00000489912 LRRC7Q96NW7 1537 aa33.47■■■□□ 2.95
LSM10-203ENST00000489912 ADAMTS13Q76LX8 1427 aa33.46■■■□□ 2.95
LSM10-203ENST00000489912 PPLO60437 1756 aa33.46■■■□□ 2.95
LSM10-203ENST00000489912 KCNA6P17658 529 aa33.45■■■□□ 2.95
LSM10-203ENST00000489912 UBAP1LF5GYI3 381 aa33.44■■■□□ 2.94
LSM10-203ENST00000489912 CHD2O14647 1828 aaKnown RBP33.44■■■□□ 2.94
LSM10-203ENST00000489912 DIP2AQ14689 1571 aa33.43■■■□□ 2.94
LSM10-203ENST00000489912 NRXN3Q9Y4C0 1643 aa33.43■■■□□ 2.94
LSM10-203ENST00000489912 TBX22Q9Y458 520 aa33.43■■■□□ 2.94
LSM10-203ENST00000489912 XIRP1Q702N8 1843 aaKnown RBP33.4■■■□□ 2.94
LSM10-203ENST00000489912 NWD1Q149M9 1564 aa33.4■■■□□ 2.94
LSM10-203ENST00000489912 SETBP1Q9Y6X0 1596 aa33.4■■■□□ 2.94
LSM10-203ENST00000489912 RPGRIP1LQ68CZ1 1315 aa33.4■■■□□ 2.94
LSM10-203ENST00000489912 SPATA31E1Q6ZUB1 1445 aa33.39■■■□□ 2.94
LSM10-203ENST00000489912 VGFO15240 615 aaPredicted RBP33.38■■■□□ 2.93
LSM10-203ENST00000489912 TRIM26Q12899 539 aaPredicted RBP33.38■■■□□ 2.93
LSM10-203ENST00000489912 ANKRD30BQ9BXX2 1392 aa33.37■■■□□ 2.93
LSM10-203ENST00000489912 PROSER2Q86WR7 435 aaPredicted RBP33.37■■■□□ 2.93
LSM10-203ENST00000489912 RBM33Q96EV2 1170 aaKnown RBP33.37■■■□□ 2.93
LSM10-203ENST00000489912 IFT172Q9UG01 1749 aa33.34■■■□□ 2.93
LSM10-203ENST00000489912 NKTRP30414 1462 aaKnown RBP33.33■■■□□ 2.93
LSM10-203ENST00000489912 SCAF1Q9H7N4 1312 aaKnown RBP33.32■■■□□ 2.93
LSM10-203ENST00000489912 TMEM94Q12767 1356 aa33.32■■■□□ 2.92
LSM10-203ENST00000489912 TOM1O60784 492 aa33.29■■■□□ 2.92
LSM10-203ENST00000489912 PIP4K2BP78356 416 aa33.29■■■□□ 2.92
LSM10-203ENST00000489912 PIK3R4Q99570 1358 aa33.29■■■□□ 2.92
LSM10-203ENST00000489912 PTPRUQ92729 1446 aa33.28■■■□□ 2.92
LSM10-203ENST00000489912 METP08581 1390 aa33.28■■■□□ 2.92
LSM10-203ENST00000489912 AMOTL2Q9Y2J4 779 aa33.27■■■□□ 2.92
LSM10-203ENST00000489912 ADGRF5Q8IZF2 1346 aa33.27■■■□□ 2.92
LSM10-203ENST00000489912 ALKQ9UM73 1620 aa33.25■■■□□ 2.91
LSM10-203ENST00000489912 SETD1AO15047 1707 aaKnown RBP33.25■■■□□ 2.91
LSM10-203ENST00000489912 XRN1Q8IZH2 1706 aaKnown RBP33.22■■■□□ 2.91
LSM10-203ENST00000489912 C14orf37Q86TY3 774 aa33.2■■■□□ 2.91
LSM10-203ENST00000489912 MSH6P52701 1360 aa33.15■■■□□ 2.9
LSM10-203ENST00000489912 KDM2AQ9Y2K7 1162 aa33.13■■■□□ 2.89
LSM10-203ENST00000489912 PIK3C2GO75747 1445 aa33.12■■■□□ 2.89
LSM10-203ENST00000489912 MYOM2P54296 1465 aa33.12■■■□□ 2.89
LSM10-203ENST00000489912 DCAF11Q8TEB1 546 aa33.1■■■□□ 2.89
LSM10-203ENST00000489912 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.07■■■□□ 2.88
LSM10-203ENST00000489912 NRXN1Q9ULB1 1477 aa33.05■■■□□ 2.88
LSM10-203ENST00000489912 NCOA3Q9Y6Q9 1424 aa33.05■■■□□ 2.88
LSM10-203ENST00000489912 TMEM132EQ6IEE7 984 aa33.05■■■□□ 2.88
LSM10-203ENST00000489912 DHX57Q6P158 1386 aaKnown RBP33.05■■■□□ 2.88
LSM10-203ENST00000489912 STK26Q9P289 416 aa33.04■■■□□ 2.88
LSM10-203ENST00000489912 ASXL1Q8IXJ9 1541 aa33.02■■■□□ 2.88
LSM10-203ENST00000489912 CFAP70Q5T0N1 1121 aa33.02■■■□□ 2.88
LSM10-203ENST00000489912 ROBO2Q9HCK4 1378 aa33.01■■■□□ 2.88
LSM10-203ENST00000489912 HSPA1LP34931 641 aa33.01■■■□□ 2.87
LSM10-203ENST00000489912 C19orf44Q9H6X5 657 aa33.01■■■□□ 2.87
LSM10-203ENST00000489912 LAMC1P11047 1609 aa33.01■■■□□ 2.87
LSM10-203ENST00000489912 PTCH1Q13635 1447 aa33■■■□□ 2.87
LSM10-203ENST00000489912 ATF3P18847 181 aa32.99■■■□□ 2.87
LSM10-203ENST00000489912 SIN3AQ96ST3 1273 aa32.99■■■□□ 2.87
LSM10-203ENST00000489912 C14orf93Q9H972 538 aaKnown RBP32.99■■■□□ 2.87
LSM10-203ENST00000489912 NALCNQ8IZF0 1738 aa32.99■■■□□ 2.87
LSM10-203ENST00000489912 NEUROD1Q13562 356 aa32.98■■■□□ 2.87
LSM10-203ENST00000489912 ROBO1Q9Y6N7 1651 aa32.97■■■□□ 2.87
LSM10-203ENST00000489912 SLAIN2Q9P270 581 aa32.96■■■□□ 2.87
LSM10-203ENST00000489912 CADPS2Q86UW7 1296 aa32.95■■■□□ 2.87
LSM10-203ENST00000489912 LRPPRCP42704 1394 aaKnown RBP32.95■■■□□ 2.86
LSM10-203ENST00000489912 PCGF6Q9BYE7 350 aa32.94■■■□□ 2.86
LSM10-203ENST00000489912 YTHDC2Q9H6S0 1430 aaKnown RBP32.94■■■□□ 2.86
LSM10-203ENST00000489912 ADGRL3Q9HAR2 1447 aa32.94■■■□□ 2.86
LSM10-203ENST00000489912 KNDC1Q76NI1 1749 aa32.93■■■□□ 2.86
LSM10-203ENST00000489912 FAM135BQ49AJ0 1406 aa32.91■■■□□ 2.86
LSM10-203ENST00000489912 PRAG1Q86YV5 1406 aa32.91■■■□□ 2.86
LSM10-203ENST00000489912 STAC3Q96MF2 364 aa32.9■■■□□ 2.86
LSM10-203ENST00000489912 WAPLQ7Z5K2 1190 aa32.88■■■□□ 2.85
LSM10-203ENST00000489912 TECPR2O15040 1411 aa32.87■■■□□ 2.85
LSM10-203ENST00000489912 DCCP43146 1447 aa32.87■■■□□ 2.85
LSM10-203ENST00000489912 ABCC11Q96J66 1382 aa32.87■■■□□ 2.85
LSM10-203ENST00000489912 PLEKHH1Q9ULM0 1364 aa32.84■■■□□ 2.85
LSM10-203ENST00000489912 L3MBTL2Q969R5 705 aa32.83■■■□□ 2.85
LSM10-203ENST00000489912 ADGRB1O14514 1584 aa32.83■■■□□ 2.85
LSM10-203ENST00000489912 MST1RQ04912 1400 aa32.8■■■□□ 2.84
LSM10-203ENST00000489912 PHLPP1O60346 1717 aa32.8■■■□□ 2.84
LSM10-203ENST00000489912 TRAK1Q9UPV9 953 aa32.79■■■□□ 2.84
LSM10-203ENST00000489912 SAFB2Q14151 953 aaKnown RBP eCLIP32.78■■■□□ 2.84
LSM10-203ENST00000489912 PRAM1Q96QH2 718 aa32.75■■■□□ 2.83
LSM10-203ENST00000489912 KIAA1210Q9ULL0 1709 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms