RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SLC26A8Q96RN1 970 aa21.21■□□□□ 0.99
VTI1A-206ENST00000489142 RIMS2Q9UQ26 1411 aa21.21■□□□□ 0.99
VTI1A-206ENST00000489142 ALKQ9UM73 1620 aa21.2■□□□□ 0.98
VTI1A-206ENST00000489142 NUTM2DQ5VT03 806 aaPredicted RBP21.2■□□□□ 0.98
VTI1A-206ENST00000489142 BCANQ96GW7 911 aa21.19■□□□□ 0.98
VTI1A-206ENST00000489142 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
VTI1A-206ENST00000489142 PPP1R15AO75807 674 aaPredicted RBP21.17■□□□□ 0.98
VTI1A-206ENST00000489142 TOM1O60784 492 aa21.15■□□□□ 0.98
VTI1A-206ENST00000489142 TRIM52Q96A61 297 aa21.15■□□□□ 0.98
VTI1A-206ENST00000489142 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
VTI1A-206ENST00000489142 PLEKHG1Q9ULL1 1385 aa21.13■□□□□ 0.97
VTI1A-206ENST00000489142 RBM33Q96EV2 1170 aaKnown RBP21.12■□□□□ 0.97
VTI1A-206ENST00000489142 NWD1Q149M9 1564 aa21.11■□□□□ 0.97
VTI1A-206ENST00000489142 TRPM2O94759 1503 aa21.1■□□□□ 0.97
VTI1A-206ENST00000489142 HSPA1LP34931 641 aa21.1■□□□□ 0.97
VTI1A-206ENST00000489142 CHD2O14647 1828 aaKnown RBP21.1■□□□□ 0.97
VTI1A-206ENST00000489142 KCNA6P17658 529 aa21.09■□□□□ 0.97
VTI1A-206ENST00000489142 HDGFP51858 240 aaKnown RBP21.08■□□□□ 0.97
VTI1A-206ENST00000489142 KIF1BO60333 1816 aa21.08■□□□□ 0.96
VTI1A-206ENST00000489142 TMEM94Q12767 1356 aa21.08■□□□□ 0.96
VTI1A-206ENST00000489142 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
VTI1A-206ENST00000489142 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
VTI1A-206ENST00000489142 ZNF326Q5BKZ1 582 aaKnown RBP21.06■□□□□ 0.96
VTI1A-206ENST00000489142 PROSER2Q86WR7 435 aaPredicted RBP21.06■□□□□ 0.96
VTI1A-206ENST00000489142 DISP3Q9P2K9 1392 aa21.06■□□□□ 0.96
VTI1A-206ENST00000489142 SLC4A1APQ9BWU0 796 aaKnown RBP21.05■□□□□ 0.96
VTI1A-206ENST00000489142 NKTRP30414 1462 aaKnown RBP21.05■□□□□ 0.96
VTI1A-206ENST00000489142 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
VTI1A-206ENST00000489142 DIP2AQ14689 1571 aa21.03■□□□□ 0.96
VTI1A-206ENST00000489142 FOXD1Q16676 465 aa21.03■□□□□ 0.96
VTI1A-206ENST00000489142 NEXMIFQ5QGS0 1516 aa21.01■□□□□ 0.95
VTI1A-206ENST00000489142 TBX22Q9Y458 520 aa21■□□□□ 0.95
VTI1A-206ENST00000489142 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
VTI1A-206ENST00000489142 PTPRUQ92729 1446 aa20.96■□□□□ 0.95
VTI1A-206ENST00000489142 ROBO1Q9Y6N7 1651 aa20.95■□□□□ 0.94
VTI1A-206ENST00000489142 MSH6P52701 1360 aa20.94■□□□□ 0.94
VTI1A-206ENST00000489142 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
VTI1A-206ENST00000489142 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
VTI1A-206ENST00000489142 XRN1Q8IZH2 1706 aaKnown RBP20.92■□□□□ 0.94
VTI1A-206ENST00000489142 PPLO60437 1756 aa20.92■□□□□ 0.94
VTI1A-206ENST00000489142 ILDR2Q71H61 639 aa20.92■□□□□ 0.94
VTI1A-206ENST00000489142 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
VTI1A-206ENST00000489142 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
VTI1A-206ENST00000489142 PIK3R4Q99570 1358 aa20.92■□□□□ 0.94
VTI1A-206ENST00000489142 METP08581 1390 aa20.91■□□□□ 0.94
VTI1A-206ENST00000489142 C14orf37Q86TY3 774 aa20.91■□□□□ 0.94
VTI1A-206ENST00000489142 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.9■□□□□ 0.94
VTI1A-206ENST00000489142 SETD1AO15047 1707 aaKnown RBP20.89■□□□□ 0.93
VTI1A-206ENST00000489142 FAM135BQ49AJ0 1406 aa20.88■□□□□ 0.93
VTI1A-206ENST00000489142 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
VTI1A-206ENST00000489142 RAB3GAP2Q9H2M9 1393 aa20.87■□□□□ 0.93
VTI1A-206ENST00000489142 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
VTI1A-206ENST00000489142 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
VTI1A-206ENST00000489142 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
VTI1A-206ENST00000489142 IFT172Q9UG01 1749 aa20.84■□□□□ 0.93
VTI1A-206ENST00000489142 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
VTI1A-206ENST00000489142 NCOA3Q9Y6Q9 1424 aa20.83■□□□□ 0.93
VTI1A-206ENST00000489142 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
VTI1A-206ENST00000489142 SPATA31E1Q6ZUB1 1445 aa20.81■□□□□ 0.92
VTI1A-206ENST00000489142 NALCNQ8IZF0 1738 aa20.81■□□□□ 0.92
VTI1A-206ENST00000489142 C19orf44Q9H6X5 657 aa20.8■□□□□ 0.92
VTI1A-206ENST00000489142 ATF3P18847 181 aa20.79■□□□□ 0.92
VTI1A-206ENST00000489142 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
VTI1A-206ENST00000489142 CADPS2Q86UW7 1296 aa20.77■□□□□ 0.92
VTI1A-206ENST00000489142 COL16A1Q07092 1604 aaPredicted RBP20.75■□□□□ 0.91
VTI1A-206ENST00000489142 ROBO2Q9HCK4 1378 aa20.74■□□□□ 0.91
VTI1A-206ENST00000489142 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
VTI1A-206ENST00000489142 ADGRL3Q9HAR2 1447 aa20.73■□□□□ 0.91
VTI1A-206ENST00000489142 DCCP43146 1447 aa20.72■□□□□ 0.91
VTI1A-206ENST00000489142 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
VTI1A-206ENST00000489142 MST1RQ04912 1400 aa20.71■□□□□ 0.91
VTI1A-206ENST00000489142 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
VTI1A-206ENST00000489142 ANKRD30BQ9BXX2 1392 aa20.71■□□□□ 0.91
VTI1A-206ENST00000489142 ASXL1Q8IXJ9 1541 aa20.7■□□□□ 0.9
VTI1A-206ENST00000489142 AHDC1Q5TGY3 1603 aaPredicted RBP20.7■□□□□ 0.9
VTI1A-206ENST00000489142 BRINP3Q76B58 766 aa20.69■□□□□ 0.9
VTI1A-206ENST00000489142 PIK3C2GO75747 1445 aa20.69■□□□□ 0.9
VTI1A-206ENST00000489142 STK26Q9P289 416 aa20.68■□□□□ 0.9
VTI1A-206ENST00000489142 TMEM132EQ6IEE7 984 aa20.67■□□□□ 0.9
VTI1A-206ENST00000489142 NHSL1Q5SYE7 1610 aa20.65■□□□□ 0.9
VTI1A-206ENST00000489142 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
VTI1A-206ENST00000489142 JCADQ9P266 1359 aa20.65■□□□□ 0.9
VTI1A-206ENST00000489142 SOCS7O14512 581 aa20.64■□□□□ 0.89
VTI1A-206ENST00000489142 DDX17Q92841 729 aaKnown RBP20.64■□□□□ 0.89
VTI1A-206ENST00000489142 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.89
VTI1A-206ENST00000489142 MYOM2P54296 1465 aa20.62■□□□□ 0.89
VTI1A-206ENST00000489142 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
VTI1A-206ENST00000489142 RGS17Q9UGC6 210 aaPredicted RBP20.62■□□□□ 0.89
VTI1A-206ENST00000489142 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
VTI1A-206ENST00000489142 C1orf167Q5SNV9 1468 aa20.61■□□□□ 0.89
VTI1A-206ENST00000489142 NRXN1Q9ULB1 1477 aa20.61■□□□□ 0.89
VTI1A-206ENST00000489142 LAMC1P11047 1609 aa20.6■□□□□ 0.89
VTI1A-206ENST00000489142 LRPPRCP42704 1394 aaKnown RBP20.6■□□□□ 0.89
VTI1A-206ENST00000489142 PLEKHH1Q9ULM0 1364 aa20.6■□□□□ 0.89
VTI1A-206ENST00000489142 LRP6O75581 1613 aa20.6■□□□□ 0.89
VTI1A-206ENST00000489142 HRCP23327 699 aa20.59■□□□□ 0.89
VTI1A-206ENST00000489142 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
VTI1A-206ENST00000489142 YTHDC2Q9H6S0 1430 aaKnown RBP20.59■□□□□ 0.89
VTI1A-206ENST00000489142 TECPR2O15040 1411 aa20.58■□□□□ 0.88
VTI1A-206ENST00000489142 CDC42BPGQ6DT37 1551 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms