RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TRIM26Q12899 539 aaPredicted RBP10.39□□□□□ -0.75
PDCD4-209ENST00000489049 TATDN2Q93075 761 aa10.39□□□□□ -0.75
PDCD4-209ENST00000489049 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
PDCD4-209ENST00000489049 RBM27Q9P2N5 1060 aaKnown RBP10.38□□□□□ -0.75
PDCD4-209ENST00000489049 PNMA3Q9UL41 463 aa10.38□□□□□ -0.75
PDCD4-209ENST00000489049 KIF21BO75037 1637 aa10.37□□□□□ -0.75
PDCD4-209ENST00000489049 PPP4CP60510 307 aa10.36□□□□□ -0.75
PDCD4-209ENST00000489049 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
PDCD4-209ENST00000489049 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
PDCD4-209ENST00000489049 NUDT18Q6ZVK8 323 aa10.34□□□□□ -0.75
PDCD4-209ENST00000489049 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
PDCD4-209ENST00000489049 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
PDCD4-209ENST00000489049 NPDC1Q9NQX5 325 aaPredicted RBP10.33□□□□□ -0.76
PDCD4-209ENST00000489049 LAMC3Q9Y6N6 1575 aa10.33□□□□□ -0.76
PDCD4-209ENST00000489049 CUX1P39880 1505 aa10.33□□□□□ -0.76
PDCD4-209ENST00000489049 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
PDCD4-209ENST00000489049 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
PDCD4-209ENST00000489049 ERICH3Q5RHP9 1530 aa10.32□□□□□ -0.76
PDCD4-209ENST00000489049 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
PDCD4-209ENST00000489049 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
PDCD4-209ENST00000489049 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
PDCD4-209ENST00000489049 CEP162Q5TB80 1403 aa10.3□□□□□ -0.76
PDCD4-209ENST00000489049 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
PDCD4-209ENST00000489049 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
PDCD4-209ENST00000489049 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
PDCD4-209ENST00000489049 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
PDCD4-209ENST00000489049 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
PDCD4-209ENST00000489049 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
PDCD4-209ENST00000489049 PRXQ9BXM0 1461 aa10.28□□□□□ -0.76
PDCD4-209ENST00000489049 RNF40O75150 1001 aa10.27□□□□□ -0.77
PDCD4-209ENST00000489049 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.77
PDCD4-209ENST00000489049 MTRQ99707 1265 aa10.26□□□□□ -0.77
PDCD4-209ENST00000489049 DNMBPQ6XZF7 1577 aa10.25□□□□□ -0.77
PDCD4-209ENST00000489049 APLP1P51693 650 aa10.24□□□□□ -0.77
PDCD4-209ENST00000489049 SWT1Q5T5J6 900 aaKnown RBP10.24□□□□□ -0.77
PDCD4-209ENST00000489049 IL21Q9HBE4 155 aa10.24□□□□□ -0.77
PDCD4-209ENST00000489049 HRCP23327 699 aa10.22□□□□□ -0.77
PDCD4-209ENST00000489049 NECTIN2Q92692 538 aa10.22□□□□□ -0.77
PDCD4-209ENST00000489049 EYA1Q99502 592 aa10.22□□□□□ -0.77
PDCD4-209ENST00000489049 CLIP1P30622 1438 aa10.22□□□□□ -0.77
PDCD4-209ENST00000489049 PTGDRQ13258 359 aa10.21□□□□□ -0.77
PDCD4-209ENST00000489049 SLF2Q8IX21 1173 aa10.21□□□□□ -0.77
PDCD4-209ENST00000489049 HAP1P54257 671 aaPredicted RBP10.2□□□□□ -0.78
PDCD4-209ENST00000489049 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
PDCD4-209ENST00000489049 RAPGEF2Q9Y4G8 1499 aa10.2□□□□□ -0.78
PDCD4-209ENST00000489049 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
PDCD4-209ENST00000489049 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
PDCD4-209ENST00000489049 CUX2O14529 1486 aa10.19□□□□□ -0.78
PDCD4-209ENST00000489049 IGF1RP08069 1367 aa10.19□□□□□ -0.78
PDCD4-209ENST00000489049 ZEB1P37275 1124 aaPredicted RBP10.19□□□□□ -0.78
PDCD4-209ENST00000489049 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
PDCD4-209ENST00000489049 ZNF516Q92618 1163 aa10.19□□□□□ -0.78
PDCD4-209ENST00000489049 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
PDCD4-209ENST00000489049 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
PDCD4-209ENST00000489049 PPP1R18Q6NYC8 613 aa10.16□□□□□ -0.78
PDCD4-209ENST00000489049 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
PDCD4-209ENST00000489049 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
PDCD4-209ENST00000489049 DNAJB2P25686 324 aa10.14□□□□□ -0.79
PDCD4-209ENST00000489049 COPS2P61201 443 aa10.14□□□□□ -0.79
PDCD4-209ENST00000489049 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
PDCD4-209ENST00000489049 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
PDCD4-209ENST00000489049 Q6ZNB5 142 aa10.13□□□□□ -0.79
PDCD4-209ENST00000489049 NKX2-3Q8TAU0 364 aa10.13□□□□□ -0.79
PDCD4-209ENST00000489049 RBM46Q8TBY0 533 aaKnown RBP10.13□□□□□ -0.79
PDCD4-209ENST00000489049 PRKD2Q9BZL6 878 aa10.13□□□□□ -0.79
PDCD4-209ENST00000489049 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
PDCD4-209ENST00000489049 NESP48681 1621 aa10.13□□□□□ -0.79
PDCD4-209ENST00000489049 SEMA3EO15041 775 aa10.12□□□□□ -0.79
PDCD4-209ENST00000489049 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
PDCD4-209ENST00000489049 TMEM134Q9H6X4 195 aa10.11□□□□□ -0.79
PDCD4-209ENST00000489049 CUL7Q14999 1698 aa10.11□□□□□ -0.79
PDCD4-209ENST00000489049 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
PDCD4-209ENST00000489049 FCHSD2O94868 740 aa10.1□□□□□ -0.79
PDCD4-209ENST00000489049 LAPTM4AQ15012 233 aa10.1□□□□□ -0.79
PDCD4-209ENST00000489049 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
PDCD4-209ENST00000489049 V9GY48 417 aaPredicted RBP10.1□□□□□ -0.79
PDCD4-209ENST00000489049 ZPR1O75312 459 aa10.09□□□□□ -0.79
PDCD4-209ENST00000489049 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
PDCD4-209ENST00000489049 WDR97A6NE52 1622 aa10.08□□□□□ -0.8
PDCD4-209ENST00000489049 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
PDCD4-209ENST00000489049 MRC2Q9UBG0 1479 aa10.08□□□□□ -0.8
PDCD4-209ENST00000489049 GGCXP38435 758 aa10.07□□□□□ -0.8
PDCD4-209ENST00000489049 KDM2AQ9Y2K7 1162 aa10.07□□□□□ -0.8
PDCD4-209ENST00000489049 GFRA3O60609 400 aa10.06□□□□□ -0.8
PDCD4-209ENST00000489049 BLOC1S3Q6QNY0 202 aa10.06□□□□□ -0.8
PDCD4-209ENST00000489049 MAP3K1Q13233 1512 aa10.05□□□□□ -0.8
PDCD4-209ENST00000489049 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
PDCD4-209ENST00000489049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
PDCD4-209ENST00000489049 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
PDCD4-209ENST00000489049 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
PDCD4-209ENST00000489049 FHAD1B1AJZ9 1412 aa10.04□□□□□ -0.8
PDCD4-209ENST00000489049 GAPVD1Q14C86 1478 aa10.04□□□□□ -0.8
PDCD4-209ENST00000489049 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
PDCD4-209ENST00000489049 EFCAB5A4FU69 1503 aa10.03□□□□□ -0.8
PDCD4-209ENST00000489049 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-209ENST00000489049 CFHP08603 1231 aa10.03□□□□□ -0.8
PDCD4-209ENST00000489049 PXYLP1Q8TE99 480 aa10.03□□□□□ -0.8
PDCD4-209ENST00000489049 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
PDCD4-209ENST00000489049 ACTN4O43707 911 aaKnown RBP10.02□□□□□ -0.81
PDCD4-209ENST00000489049 HIC1Q14526 733 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms