RNA–Protein interactions for RNA: ENST00000488229.1

RPSAP4-201, Transcript of ribosomal protein SA pseudogene 4, humanhuman

BASIC

Gene RPSAP4, Length 888 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP4-201ENST00000488229 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
RPSAP4-201ENST00000488229 UBAP1LF5GYI3 381 aa17.26■□□□□ 0.35
RPSAP4-201ENST00000488229 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
RPSAP4-201ENST00000488229 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
RPSAP4-201ENST00000488229 TRPM2O94759 1503 aa17.26■□□□□ 0.35
RPSAP4-201ENST00000488229 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
RPSAP4-201ENST00000488229 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
RPSAP4-201ENST00000488229 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
RPSAP4-201ENST00000488229 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
RPSAP4-201ENST00000488229 KCNA6P17658 529 aa17.22■□□□□ 0.35
RPSAP4-201ENST00000488229 FOXD1Q16676 465 aa17.22■□□□□ 0.35
RPSAP4-201ENST00000488229 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
RPSAP4-201ENST00000488229 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
RPSAP4-201ENST00000488229 RBM33Q96EV2 1170 aaKnown RBP17.2■□□□□ 0.34
RPSAP4-201ENST00000488229 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
RPSAP4-201ENST00000488229 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
RPSAP4-201ENST00000488229 TBX22Q9Y458 520 aa17.18■□□□□ 0.34
RPSAP4-201ENST00000488229 TMEM94Q12767 1356 aa17.17■□□□□ 0.34
RPSAP4-201ENST00000488229 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
RPSAP4-201ENST00000488229 PTPRUQ92729 1446 aa17.17■□□□□ 0.34
RPSAP4-201ENST00000488229 MPHOSPH9Q99550 1183 aa17.17■□□□□ 0.34
RPSAP4-201ENST00000488229 SETD5Q9C0A6 1442 aa17.17■□□□□ 0.34
RPSAP4-201ENST00000488229 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
RPSAP4-201ENST00000488229 KIF1BO60333 1816 aa17.15■□□□□ 0.34
RPSAP4-201ENST00000488229 TOM1O60784 492 aa17.15■□□□□ 0.34
RPSAP4-201ENST00000488229 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
RPSAP4-201ENST00000488229 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
RPSAP4-201ENST00000488229 SETBP1Q9Y6X0 1596 aa17.15■□□□□ 0.34
RPSAP4-201ENST00000488229 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
RPSAP4-201ENST00000488229 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
RPSAP4-201ENST00000488229 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
RPSAP4-201ENST00000488229 HSPA1LP34931 641 aa17.13■□□□□ 0.33
RPSAP4-201ENST00000488229 BCANQ96GW7 911 aa17.13■□□□□ 0.33
RPSAP4-201ENST00000488229 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
RPSAP4-201ENST00000488229 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
RPSAP4-201ENST00000488229 METP08581 1390 aa17.11■□□□□ 0.33
RPSAP4-201ENST00000488229 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
RPSAP4-201ENST00000488229 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
RPSAP4-201ENST00000488229 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
RPSAP4-201ENST00000488229 XRN1Q8IZH2 1706 aaKnown RBP17.09■□□□□ 0.33
RPSAP4-201ENST00000488229 PPLO60437 1756 aa17.09■□□□□ 0.33
RPSAP4-201ENST00000488229 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
RPSAP4-201ENST00000488229 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
RPSAP4-201ENST00000488229 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
RPSAP4-201ENST00000488229 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
RPSAP4-201ENST00000488229 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
RPSAP4-201ENST00000488229 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
RPSAP4-201ENST00000488229 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
RPSAP4-201ENST00000488229 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
RPSAP4-201ENST00000488229 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.02■□□□□ 0.32
RPSAP4-201ENST00000488229 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
RPSAP4-201ENST00000488229 VGFO15240 615 aaPredicted RBP17■□□□□ 0.31
RPSAP4-201ENST00000488229 RGL3Q3MIN7 710 aa17■□□□□ 0.31
RPSAP4-201ENST00000488229 MSH6P52701 1360 aa17■□□□□ 0.31
RPSAP4-201ENST00000488229 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
RPSAP4-201ENST00000488229 HRCP23327 699 aa16.99■□□□□ 0.31
RPSAP4-201ENST00000488229 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
RPSAP4-201ENST00000488229 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
RPSAP4-201ENST00000488229 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
RPSAP4-201ENST00000488229 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
RPSAP4-201ENST00000488229 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
RPSAP4-201ENST00000488229 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
RPSAP4-201ENST00000488229 ROBO2Q9HCK4 1378 aa16.96■□□□□ 0.31
RPSAP4-201ENST00000488229 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
RPSAP4-201ENST00000488229 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
RPSAP4-201ENST00000488229 NALCNQ8IZF0 1738 aa16.95■□□□□ 0.3
RPSAP4-201ENST00000488229 NRXN1Q9ULB1 1477 aa16.94■□□□□ 0.3
RPSAP4-201ENST00000488229 PIK3C2GO75747 1445 aa16.94■□□□□ 0.3
RPSAP4-201ENST00000488229 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
RPSAP4-201ENST00000488229 MST1RQ04912 1400 aa16.91■□□□□ 0.3
RPSAP4-201ENST00000488229 ADGRL3Q9HAR2 1447 aa16.91■□□□□ 0.3
RPSAP4-201ENST00000488229 DCCP43146 1447 aa16.9■□□□□ 0.3
RPSAP4-201ENST00000488229 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
RPSAP4-201ENST00000488229 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
RPSAP4-201ENST00000488229 COL16A1Q07092 1604 aaPredicted RBP16.89■□□□□ 0.29
RPSAP4-201ENST00000488229 MYOM2P54296 1465 aa16.89■□□□□ 0.29
RPSAP4-201ENST00000488229 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
RPSAP4-201ENST00000488229 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
RPSAP4-201ENST00000488229 TECPR2O15040 1411 aa16.87■□□□□ 0.29
RPSAP4-201ENST00000488229 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
RPSAP4-201ENST00000488229 ATF3P18847 181 aa16.87■□□□□ 0.29
RPSAP4-201ENST00000488229 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
RPSAP4-201ENST00000488229 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
RPSAP4-201ENST00000488229 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
RPSAP4-201ENST00000488229 LRPPRCP42704 1394 aaKnown RBP16.86■□□□□ 0.29
RPSAP4-201ENST00000488229 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
RPSAP4-201ENST00000488229 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
RPSAP4-201ENST00000488229 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
RPSAP4-201ENST00000488229 WAPLQ7Z5K2 1190 aa16.84■□□□□ 0.29
RPSAP4-201ENST00000488229 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
RPSAP4-201ENST00000488229 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
RPSAP4-201ENST00000488229 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.28
RPSAP4-201ENST00000488229 YTHDC2Q9H6S0 1430 aaKnown RBP16.83■□□□□ 0.28
RPSAP4-201ENST00000488229 STK26Q9P289 416 aa16.83■□□□□ 0.28
RPSAP4-201ENST00000488229 NHSL1Q5SYE7 1610 aa16.82■□□□□ 0.28
RPSAP4-201ENST00000488229 ADGRB1O14514 1584 aa16.82■□□□□ 0.28
RPSAP4-201ENST00000488229 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
RPSAP4-201ENST00000488229 LAMC1P11047 1609 aa16.79■□□□□ 0.28
RPSAP4-201ENST00000488229 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
RPSAP4-201ENST00000488229 ORAI2Q96SN7 254 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms