RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 CLTCL1P53675 1640 aa19.44■□□□□ 0.7
RPSA-208ENST00000487876 TRPM2O94759 1503 aa19.42■□□□□ 0.7
RPSA-208ENST00000487876 CHGAP10645 457 aaKnown RBP19.42■□□□□ 0.7
RPSA-208ENST00000487876 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
RPSA-208ENST00000487876 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
RPSA-208ENST00000487876 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
RPSA-208ENST00000487876 KIF1BO60333 1816 aa19.38■□□□□ 0.69
RPSA-208ENST00000487876 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
RPSA-208ENST00000487876 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
RPSA-208ENST00000487876 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
RPSA-208ENST00000487876 PLEKHG1Q9ULL1 1385 aa19.35■□□□□ 0.69
RPSA-208ENST00000487876 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
RPSA-208ENST00000487876 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
RPSA-208ENST00000487876 UBAP1LF5GYI3 381 aa19.34■□□□□ 0.69
RPSA-208ENST00000487876 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
RPSA-208ENST00000487876 NWD1Q149M9 1564 aa19.33■□□□□ 0.69
RPSA-208ENST00000487876 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.68
RPSA-208ENST00000487876 BCANQ96GW7 911 aa19.32■□□□□ 0.68
RPSA-208ENST00000487876 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
RPSA-208ENST00000487876 NRXN3Q9Y4C0 1643 aa19.31■□□□□ 0.68
RPSA-208ENST00000487876 NEXMIFQ5QGS0 1516 aa19.3■□□□□ 0.68
RPSA-208ENST00000487876 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
RPSA-208ENST00000487876 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.29■□□□□ 0.68
RPSA-208ENST00000487876 RAB3GAP2Q9H2M9 1393 aa19.29■□□□□ 0.68
RPSA-208ENST00000487876 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
RPSA-208ENST00000487876 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
RPSA-208ENST00000487876 ZNF326Q5BKZ1 582 aaKnown RBP19.27■□□□□ 0.68
RPSA-208ENST00000487876 KCNA6P17658 529 aa19.26■□□□□ 0.67
RPSA-208ENST00000487876 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
RPSA-208ENST00000487876 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
RPSA-208ENST00000487876 SETBP1Q9Y6X0 1596 aa19.26■□□□□ 0.67
RPSA-208ENST00000487876 PPLO60437 1756 aa19.25■□□□□ 0.67
RPSA-208ENST00000487876 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
RPSA-208ENST00000487876 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
RPSA-208ENST00000487876 TMEM94Q12767 1356 aa19.23■□□□□ 0.67
RPSA-208ENST00000487876 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
RPSA-208ENST00000487876 TOM1O60784 492 aa19.22■□□□□ 0.67
RPSA-208ENST00000487876 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
RPSA-208ENST00000487876 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
RPSA-208ENST00000487876 SETD1AO15047 1707 aaKnown RBP19.2■□□□□ 0.66
RPSA-208ENST00000487876 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
RPSA-208ENST00000487876 PTPRUQ92729 1446 aa19.19■□□□□ 0.66
RPSA-208ENST00000487876 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
RPSA-208ENST00000487876 XRN1Q8IZH2 1706 aaKnown RBP19.19■□□□□ 0.66
RPSA-208ENST00000487876 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
RPSA-208ENST00000487876 METP08581 1390 aa19.16■□□□□ 0.66
RPSA-208ENST00000487876 PIK3R4Q99570 1358 aa19.16■□□□□ 0.66
RPSA-208ENST00000487876 HSPA1LP34931 641 aa19.14■□□□□ 0.65
RPSA-208ENST00000487876 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.65
RPSA-208ENST00000487876 AMOTL2Q9Y2J4 779 aa19.12■□□□□ 0.65
RPSA-208ENST00000487876 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
RPSA-208ENST00000487876 ROBO1Q9Y6N7 1651 aa19.11■□□□□ 0.65
RPSA-208ENST00000487876 RPGRIP1LQ68CZ1 1315 aa19.11■□□□□ 0.65
RPSA-208ENST00000487876 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
RPSA-208ENST00000487876 MSH6P52701 1360 aa19.1■□□□□ 0.65
RPSA-208ENST00000487876 VGFO15240 615 aaPredicted RBP19.09■□□□□ 0.65
RPSA-208ENST00000487876 NALCNQ8IZF0 1738 aa19.07■□□□□ 0.64
RPSA-208ENST00000487876 ANKRD30BQ9BXX2 1392 aa19.06■□□□□ 0.64
RPSA-208ENST00000487876 ADGRF5Q8IZF2 1346 aa19.06■□□□□ 0.64
RPSA-208ENST00000487876 NCOA3Q9Y6Q9 1424 aa19.06■□□□□ 0.64
RPSA-208ENST00000487876 HRCP23327 699 aa19.05■□□□□ 0.64
RPSA-208ENST00000487876 C14orf37Q86TY3 774 aa19.05■□□□□ 0.64
RPSA-208ENST00000487876 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
RPSA-208ENST00000487876 ASXL1Q8IXJ9 1541 aa19.03■□□□□ 0.64
RPSA-208ENST00000487876 PIK3C2GO75747 1445 aa19.02■□□□□ 0.64
RPSA-208ENST00000487876 PTCH1Q13635 1447 aa19■□□□□ 0.63
RPSA-208ENST00000487876 SLAIN2Q9P270 581 aa19■□□□□ 0.63
RPSA-208ENST00000487876 ROBO2Q9HCK4 1378 aa19■□□□□ 0.63
RPSA-208ENST00000487876 MED1Q15648 1581 aaPredicted RBP18.99■□□□□ 0.63
RPSA-208ENST00000487876 MYOM2P54296 1465 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 NRXN1Q9ULB1 1477 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 ADGRL3Q9HAR2 1447 aa18.99■□□□□ 0.63
RPSA-208ENST00000487876 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
RPSA-208ENST00000487876 DCCP43146 1447 aa18.97■□□□□ 0.63
RPSA-208ENST00000487876 LAMC1P11047 1609 aa18.96■□□□□ 0.63
RPSA-208ENST00000487876 ATF3P18847 181 aa18.96■□□□□ 0.63
RPSA-208ENST00000487876 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
RPSA-208ENST00000487876 MST1RQ04912 1400 aa18.94■□□□□ 0.62
RPSA-208ENST00000487876 COL16A1Q07092 1604 aaPredicted RBP18.93■□□□□ 0.62
RPSA-208ENST00000487876 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
RPSA-208ENST00000487876 TECPR2O15040 1411 aa18.91■□□□□ 0.62
RPSA-208ENST00000487876 STK26Q9P289 416 aa18.91■□□□□ 0.62
RPSA-208ENST00000487876 AHDC1Q5TGY3 1603 aaPredicted RBP18.91■□□□□ 0.62
RPSA-208ENST00000487876 LRPPRCP42704 1394 aaKnown RBP18.91■□□□□ 0.62
RPSA-208ENST00000487876 YTHDC2Q9H6S0 1430 aaKnown RBP18.9■□□□□ 0.62
RPSA-208ENST00000487876 NHSL1Q5SYE7 1610 aa18.89■□□□□ 0.62
RPSA-208ENST00000487876 CFAP70Q5T0N1 1121 aa18.89■□□□□ 0.61
RPSA-208ENST00000487876 C14orf93Q9H972 538 aaKnown RBP18.89■□□□□ 0.61
RPSA-208ENST00000487876 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
RPSA-208ENST00000487876 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
RPSA-208ENST00000487876 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
RPSA-208ENST00000487876 CDC42BPGQ6DT37 1551 aa18.88■□□□□ 0.61
RPSA-208ENST00000487876 ADGRB1O14514 1584 aa18.87■□□□□ 0.61
RPSA-208ENST00000487876 DCAF11Q8TEB1 546 aa18.87■□□□□ 0.61
RPSA-208ENST00000487876 ABCC11Q96J66 1382 aa18.87■□□□□ 0.61
RPSA-208ENST00000487876 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms