RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
RNF220-215ENST00000487332 HDGFP51858 240 aaKnown RBP15.41■□□□□ 0.06
RNF220-215ENST00000487332 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
RNF220-215ENST00000487332 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
RNF220-215ENST00000487332 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
RNF220-215ENST00000487332 LRRC7Q96NW7 1537 aa15.4■□□□□ 0.06
RNF220-215ENST00000487332 SETBP1Q9Y6X0 1596 aa15.38■□□□□ 0.05
RNF220-215ENST00000487332 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
RNF220-215ENST00000487332 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
RNF220-215ENST00000487332 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
RNF220-215ENST00000487332 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
RNF220-215ENST00000487332 KIF1BO60333 1816 aa15.36■□□□□ 0.05
RNF220-215ENST00000487332 ADAMTS13Q76LX8 1427 aa15.35■□□□□ 0.05
RNF220-215ENST00000487332 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
RNF220-215ENST00000487332 ALKQ9UM73 1620 aa15.33■□□□□ 0.04
RNF220-215ENST00000487332 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.04
RNF220-215ENST00000487332 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
RNF220-215ENST00000487332 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
RNF220-215ENST00000487332 KCNA6P17658 529 aa15.32■□□□□ 0.04
RNF220-215ENST00000487332 HRCP23327 699 aa15.32■□□□□ 0.04
RNF220-215ENST00000487332 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
RNF220-215ENST00000487332 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
RNF220-215ENST00000487332 CCDC144AA2RUR9 1427 aa15.31■□□□□ 0.04
RNF220-215ENST00000487332 NCOA3Q9Y6Q9 1424 aa15.31■□□□□ 0.04
RNF220-215ENST00000487332 XIRP1Q702N8 1843 aaKnown RBP15.31■□□□□ 0.04
RNF220-215ENST00000487332 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
RNF220-215ENST00000487332 RPGRIP1LQ68CZ1 1315 aa15.29■□□□□ 0.04
RNF220-215ENST00000487332 UBAP1LF5GYI3 381 aa15.29■□□□□ 0.04
RNF220-215ENST00000487332 XRN1Q8IZH2 1706 aaKnown RBP15.29■□□□□ 0.04
RNF220-215ENST00000487332 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
RNF220-215ENST00000487332 PRAG1Q86YV5 1406 aa15.28■□□□□ 0.04
RNF220-215ENST00000487332 TOM1O60784 492 aa15.28■□□□□ 0.04
RNF220-215ENST00000487332 SLC26A8Q96RN1 970 aa15.28■□□□□ 0.04
RNF220-215ENST00000487332 PPLO60437 1756 aa15.28■□□□□ 0.04
RNF220-215ENST00000487332 IFT172Q9UG01 1749 aa15.27■□□□□ 0.04
RNF220-215ENST00000487332 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
RNF220-215ENST00000487332 SETD1AO15047 1707 aaKnown RBP15.26■□□□□ 0.03
RNF220-215ENST00000487332 ZNF326Q5BKZ1 582 aaKnown RBP15.25■□□□□ 0.03
RNF220-215ENST00000487332 BCANQ96GW7 911 aa15.24■□□□□ 0.03
RNF220-215ENST00000487332 VGFO15240 615 aaPredicted RBP15.23■□□□□ 0.03
RNF220-215ENST00000487332 PTPRUQ92729 1446 aa15.23■□□□□ 0.03
RNF220-215ENST00000487332 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
RNF220-215ENST00000487332 DCCP43146 1447 aa15.21■□□□□ 0.03
RNF220-215ENST00000487332 PTCH1Q13635 1447 aa15.21■□□□□ 0.03
RNF220-215ENST00000487332 MSH6P52701 1360 aa15.21■□□□□ 0.02
RNF220-215ENST00000487332 MYOM2P54296 1465 aa15.2■□□□□ 0.02
RNF220-215ENST00000487332 FOXD1Q16676 465 aa15.2■□□□□ 0.02
RNF220-215ENST00000487332 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
RNF220-215ENST00000487332 PROSER2Q86WR7 435 aaPredicted RBP15.2■□□□□ 0.02
RNF220-215ENST00000487332 FAM135BQ49AJ0 1406 aa15.19■□□□□ 0.02
RNF220-215ENST00000487332 METP08581 1390 aa15.19■□□□□ 0.02
RNF220-215ENST00000487332 NRXN1Q9ULB1 1477 aa15.19■□□□□ 0.02
RNF220-215ENST00000487332 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
RNF220-215ENST00000487332 LAMC1P11047 1609 aa15.17■□□□□ 0.02
RNF220-215ENST00000487332 AMOTL2Q9Y2J4 779 aa15.15■□□□□ 0.02
RNF220-215ENST00000487332 KNDC1Q76NI1 1749 aa15.14■□□□□ 0.01
RNF220-215ENST00000487332 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.14■□□□□ 0.01
RNF220-215ENST00000487332 ROBO1Q9Y6N7 1651 aa15.14■□□□□ 0.01
RNF220-215ENST00000487332 PIP4K2BP78356 416 aa15.14■□□□□ 0.01
RNF220-215ENST00000487332 TECPR2O15040 1411 aa15.14■□□□□ 0.01
RNF220-215ENST00000487332 ADGRL3Q9HAR2 1447 aa15.13■□□□□ 0.01
RNF220-215ENST00000487332 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
RNF220-215ENST00000487332 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
RNF220-215ENST00000487332 NALCNQ8IZF0 1738 aa15.12■□□□□ 0.01
RNF220-215ENST00000487332 HSPA1LP34931 641 aa15.11■□□□□ 0.01
RNF220-215ENST00000487332 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
RNF220-215ENST00000487332 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
RNF220-215ENST00000487332 ADGRF5Q8IZF2 1346 aa15.11■□□□□ 0.01
RNF220-215ENST00000487332 STAC3Q96MF2 364 aa15.1■□□□□ 0.01
RNF220-215ENST00000487332 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
RNF220-215ENST00000487332 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
RNF220-215ENST00000487332 RGL3Q3MIN7 710 aa15.08■□□□□ 0
RNF220-215ENST00000487332 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
RNF220-215ENST00000487332 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
RNF220-215ENST00000487332 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
RNF220-215ENST00000487332 RBM33Q96EV2 1170 aaKnown RBP15.07■□□□□ 0
RNF220-215ENST00000487332 ABCC11Q96J66 1382 aa15.07■□□□□ 0
RNF220-215ENST00000487332 MST1RQ04912 1400 aa15.07■□□□□ 0
RNF220-215ENST00000487332 MED1Q15648 1581 aaPredicted RBP15.07■□□□□ 0
RNF220-215ENST00000487332 SLAIN2Q9P270 581 aa15.06■□□□□ 0
RNF220-215ENST00000487332 ATF3P18847 181 aa15.05■□□□□ -0
RNF220-215ENST00000487332 C14orf37Q86TY3 774 aa15.05■□□□□ -0
RNF220-215ENST00000487332 DLC1Q96QB1 1528 aa15.05■□□□□ -0
RNF220-215ENST00000487332 COL16A1Q07092 1604 aaPredicted RBP15.05■□□□□ -0
RNF220-215ENST00000487332 ADGRB1O14514 1584 aa15.04■□□□□ -0
RNF220-215ENST00000487332 YTHDC2Q9H6S0 1430 aaKnown RBP15.04■□□□□ -0
RNF220-215ENST00000487332 C14orf93Q9H972 538 aaKnown RBP15.04■□□□□ -0
RNF220-215ENST00000487332 NHSL1Q5SYE7 1610 aa15.03■□□□□ -0
RNF220-215ENST00000487332 SIRT1Q96EB6 747 aa15.03■□□□□ -0
RNF220-215ENST00000487332 PHLPP1O60346 1717 aa15.03■□□□□ -0
RNF220-215ENST00000487332 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
RNF220-215ENST00000487332 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
RNF220-215ENST00000487332 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
RNF220-215ENST00000487332 DISP3Q9P2K9 1392 aa14.99□□□□□ -0.01
RNF220-215ENST00000487332 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
RNF220-215ENST00000487332 SHPRHQ149N8 1683 aa14.99□□□□□ -0.01
RNF220-215ENST00000487332 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
RNF220-215ENST00000487332 JCADQ9P266 1359 aa14.98□□□□□ -0.01
RNF220-215ENST00000487332 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
RNF220-215ENST00000487332 CFAP70Q5T0N1 1121 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms