RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MYOM2P54296 1465 aa16.29■□□□□ 0.2
SND1-212ENST00000485871 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
SND1-212ENST00000485871 A2ML1A8K2U0 1454 aa16.28■□□□□ 0.2
SND1-212ENST00000485871 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.2
SND1-212ENST00000485871 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.2
SND1-212ENST00000485871 SETD1BQ9UPS6 1966 aaKnown RBP16.27■□□□□ 0.19
SND1-212ENST00000485871 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
SND1-212ENST00000485871 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
SND1-212ENST00000485871 NRXN1Q9ULB1 1477 aa16.26■□□□□ 0.19
SND1-212ENST00000485871 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
SND1-212ENST00000485871 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
SND1-212ENST00000485871 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
SND1-212ENST00000485871 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
SND1-212ENST00000485871 UBAP1LF5GYI3 381 aa16.23■□□□□ 0.19
SND1-212ENST00000485871 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
SND1-212ENST00000485871 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
SND1-212ENST00000485871 CEP170BQ9Y4F5 1589 aaPredicted RBP16.22■□□□□ 0.19
SND1-212ENST00000485871 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
SND1-212ENST00000485871 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
SND1-212ENST00000485871 LAMC1P11047 1609 aa16.2■□□□□ 0.18
SND1-212ENST00000485871 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
SND1-212ENST00000485871 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
SND1-212ENST00000485871 CHGAP10645 457 aaKnown RBP16.19■□□□□ 0.18
SND1-212ENST00000485871 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
SND1-212ENST00000485871 SLIT1O75093 1534 aa16.18■□□□□ 0.18
SND1-212ENST00000485871 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
SND1-212ENST00000485871 ADGRF5Q8IZF2 1346 aa16.18■□□□□ 0.18
SND1-212ENST00000485871 SETD1AO15047 1707 aaKnown RBP16.17■□□□□ 0.18
SND1-212ENST00000485871 NRXN3Q9Y4C0 1643 aa16.16■□□□□ 0.18
SND1-212ENST00000485871 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
SND1-212ENST00000485871 RIMS2Q9UQ26 1411 aa16.16■□□□□ 0.18
SND1-212ENST00000485871 GPRASP1Q5JY77 1395 aa16.15■□□□□ 0.18
SND1-212ENST00000485871 IQGAP1P46940 1657 aa16.14■□□□□ 0.18
SND1-212ENST00000485871 TMEM2Q9UHN6 1383 aa16.14■□□□□ 0.17
SND1-212ENST00000485871 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
SND1-212ENST00000485871 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
SND1-212ENST00000485871 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
SND1-212ENST00000485871 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
SND1-212ENST00000485871 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
SND1-212ENST00000485871 ASXL1Q8IXJ9 1541 aa16.12■□□□□ 0.17
SND1-212ENST00000485871 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
SND1-212ENST00000485871 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
SND1-212ENST00000485871 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
SND1-212ENST00000485871 ALKQ9UM73 1620 aa16.09■□□□□ 0.17
SND1-212ENST00000485871 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
SND1-212ENST00000485871 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
SND1-212ENST00000485871 ROCK2O75116 1388 aaKnown RBP16.08■□□□□ 0.16
SND1-212ENST00000485871 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
SND1-212ENST00000485871 LTKP29376 864 aa16.06■□□□□ 0.16
SND1-212ENST00000485871 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
SND1-212ENST00000485871 CFAP70Q5T0N1 1121 aa16.06■□□□□ 0.16
SND1-212ENST00000485871 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
SND1-212ENST00000485871 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
SND1-212ENST00000485871 MED14O60244 1454 aa16.05■□□□□ 0.16
SND1-212ENST00000485871 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
SND1-212ENST00000485871 PLEKHG1Q9ULL1 1385 aa16.05■□□□□ 0.16
SND1-212ENST00000485871 HSPA1LP34931 641 aa16.05■□□□□ 0.16
SND1-212ENST00000485871 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
SND1-212ENST00000485871 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
SND1-212ENST00000485871 USP47Q96K76 1375 aa16.04■□□□□ 0.16
SND1-212ENST00000485871 ARHGEF28Q8N1W1 1705 aaKnown RBP16.04■□□□□ 0.16
SND1-212ENST00000485871 TOM1O60784 492 aa16.03■□□□□ 0.16
SND1-212ENST00000485871 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
SND1-212ENST00000485871 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
SND1-212ENST00000485871 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.16
SND1-212ENST00000485871 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.16
SND1-212ENST00000485871 DIP2AQ14689 1571 aa16.01■□□□□ 0.15
SND1-212ENST00000485871 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
SND1-212ENST00000485871 EIF4G2P78344 907 aaKnown RBP eCLIP16.01■□□□□ 0.15
SND1-212ENST00000485871 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SND1-212ENST00000485871 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
SND1-212ENST00000485871 EID1Q9Y6B2 187 aa15.98■□□□□ 0.15
SND1-212ENST00000485871 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
SND1-212ENST00000485871 DLC1Q96QB1 1528 aa15.97■□□□□ 0.15
SND1-212ENST00000485871 QRICH2Q9H0J4 1663 aa15.96■□□□□ 0.15
SND1-212ENST00000485871 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
SND1-212ENST00000485871 TMEM132EQ6IEE7 984 aa15.96■□□□□ 0.15
SND1-212ENST00000485871 METP08581 1390 aa15.96■□□□□ 0.15
SND1-212ENST00000485871 XRN1Q8IZH2 1706 aaKnown RBP15.95■□□□□ 0.14
SND1-212ENST00000485871 TECPR2O15040 1411 aa15.94■□□□□ 0.14
SND1-212ENST00000485871 CPS1P31327 1500 aa15.94■□□□□ 0.14
SND1-212ENST00000485871 CHD2O14647 1828 aaKnown RBP15.94■□□□□ 0.14
SND1-212ENST00000485871 ST20-MTHFSA0A0A6YYL1 179 aa15.94■□□□□ 0.14
SND1-212ENST00000485871 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
SND1-212ENST00000485871 LRPPRCP42704 1394 aaKnown RBP15.94■□□□□ 0.14
SND1-212ENST00000485871 TESK2Q96S53 571 aa15.93■□□□□ 0.14
SND1-212ENST00000485871 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
SND1-212ENST00000485871 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
SND1-212ENST00000485871 PTPRUQ92729 1446 aa15.93■□□□□ 0.14
SND1-212ENST00000485871 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
SND1-212ENST00000485871 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
SND1-212ENST00000485871 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
SND1-212ENST00000485871 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
SND1-212ENST00000485871 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
SND1-212ENST00000485871 PIK3R4Q99570 1358 aa15.89■□□□□ 0.13
SND1-212ENST00000485871 NWD1Q149M9 1564 aa15.89■□□□□ 0.13
SND1-212ENST00000485871 SLC26A8Q96RN1 970 aa15.89■□□□□ 0.13
SND1-212ENST00000485871 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
SND1-212ENST00000485871 WASHC2AQ641Q2 1341 aa15.88■□□□□ 0.13
SND1-212ENST00000485871 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms