RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CLTCL1P53675 1640 aa28.42■■■□□ 2.14
SNX17-206ENST00000484886 FOXD1Q16676 465 aa28.41■■■□□ 2.14
SNX17-206ENST00000484886 FBXO41Q8TF61 875 aa28.41■■■□□ 2.14
SNX17-206ENST00000484886 MPHOSPH9Q99550 1183 aa28.41■■■□□ 2.14
SNX17-206ENST00000484886 SENP3Q9H4L4 574 aaPredicted RBP28.41■■■□□ 2.14
SNX17-206ENST00000484886 ZFYVE9O95405 1425 aa28.39■■■□□ 2.14
SNX17-206ENST00000484886 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
SNX17-206ENST00000484886 NUTM2DQ5VT03 806 aaPredicted RBP28.37■■■□□ 2.13
SNX17-206ENST00000484886 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.37■■■□□ 2.13
SNX17-206ENST00000484886 KIF1BO60333 1816 aa28.36■■■□□ 2.13
SNX17-206ENST00000484886 CPS1P31327 1500 aa28.34■■■□□ 2.13
SNX17-206ENST00000484886 SLC26A8Q96RN1 970 aa28.33■■■□□ 2.13
SNX17-206ENST00000484886 PLEKHG1Q9ULL1 1385 aa28.32■■■□□ 2.12
SNX17-206ENST00000484886 IQSEC2Q5JU85 1478 aa28.3■■■□□ 2.12
SNX17-206ENST00000484886 CCDC144AA2RUR9 1427 aa28.28■■■□□ 2.12
SNX17-206ENST00000484886 STRCP1A6NGW2 1772 aa28.27■■■□□ 2.12
SNX17-206ENST00000484886 HRCP23327 699 aa28.23■■■□□ 2.11
SNX17-206ENST00000484886 NEXMIFQ5QGS0 1516 aa28.21■■■□□ 2.11
SNX17-206ENST00000484886 UBAP1LF5GYI3 381 aa28.18■■■□□ 2.1
SNX17-206ENST00000484886 KCNA6P17658 529 aa28.18■■■□□ 2.1
SNX17-206ENST00000484886 LRRC7Q96NW7 1537 aa28.18■■■□□ 2.1
SNX17-206ENST00000484886 DIP2AQ14689 1571 aa28.17■■■□□ 2.1
SNX17-206ENST00000484886 TBX22Q9Y458 520 aa28.17■■■□□ 2.1
SNX17-206ENST00000484886 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
SNX17-206ENST00000484886 RGL3Q3MIN7 710 aa28.15■■■□□ 2.1
SNX17-206ENST00000484886 RPGRIP1LQ68CZ1 1315 aa28.15■■■□□ 2.1
SNX17-206ENST00000484886 NWD1Q149M9 1564 aa28.12■■■□□ 2.09
SNX17-206ENST00000484886 SETBP1Q9Y6X0 1596 aa28.12■■■□□ 2.09
SNX17-206ENST00000484886 VGFO15240 615 aaPredicted RBP28.12■■■□□ 2.09
SNX17-206ENST00000484886 PROSER2Q86WR7 435 aaPredicted RBP28.11■■■□□ 2.09
SNX17-206ENST00000484886 PPLO60437 1756 aa28.11■■■□□ 2.09
SNX17-206ENST00000484886 CHD2O14647 1828 aaKnown RBP28.11■■■□□ 2.09
SNX17-206ENST00000484886 NRXN3Q9Y4C0 1643 aa28.1■■■□□ 2.09
SNX17-206ENST00000484886 NKTRP30414 1462 aaKnown RBP28.09■■■□□ 2.09
SNX17-206ENST00000484886 SCAF1Q9H7N4 1312 aaKnown RBP28.09■■■□□ 2.09
SNX17-206ENST00000484886 SPATA31E1Q6ZUB1 1445 aa28.09■■■□□ 2.09
SNX17-206ENST00000484886 TOM1O60784 492 aa28.08■■■□□ 2.09
SNX17-206ENST00000484886 TRIM26Q12899 539 aaPredicted RBP28.06■■■□□ 2.08
SNX17-206ENST00000484886 TMEM94Q12767 1356 aa28.06■■■□□ 2.08
SNX17-206ENST00000484886 PIK3R4Q99570 1358 aa28.06■■■□□ 2.08
SNX17-206ENST00000484886 ANKRD30BQ9BXX2 1392 aa28.06■■■□□ 2.08
SNX17-206ENST00000484886 XIRP1Q702N8 1843 aaKnown RBP28.05■■■□□ 2.08
SNX17-206ENST00000484886 RBM33Q96EV2 1170 aaKnown RBP28.05■■■□□ 2.08
SNX17-206ENST00000484886 PIP4K2BP78356 416 aa28.04■■■□□ 2.08
SNX17-206ENST00000484886 AMOTL2Q9Y2J4 779 aa28.01■■■□□ 2.07
SNX17-206ENST00000484886 IFT172Q9UG01 1749 aa28.01■■■□□ 2.07
SNX17-206ENST00000484886 METP08581 1390 aa27.99■■■□□ 2.07
SNX17-206ENST00000484886 PTPRUQ92729 1446 aa27.99■■■□□ 2.07
SNX17-206ENST00000484886 C14orf37Q86TY3 774 aa27.98■■■□□ 2.07
SNX17-206ENST00000484886 ADGRF5Q8IZF2 1346 aa27.97■■■□□ 2.07
SNX17-206ENST00000484886 ALKQ9UM73 1620 aa27.97■■■□□ 2.07
SNX17-206ENST00000484886 XRN1Q8IZH2 1706 aaKnown RBP27.95■■■□□ 2.06
SNX17-206ENST00000484886 MSH6P52701 1360 aa27.94■■■□□ 2.06
SNX17-206ENST00000484886 SETD1AO15047 1707 aaKnown RBP27.92■■■□□ 2.06
SNX17-206ENST00000484886 PIK3C2GO75747 1445 aa27.88■■■□□ 2.05
SNX17-206ENST00000484886 MYOM2P54296 1465 aa27.88■■■□□ 2.05
SNX17-206ENST00000484886 NCOA3Q9Y6Q9 1424 aa27.87■■■□□ 2.05
SNX17-206ENST00000484886 KDM2AQ9Y2K7 1162 aa27.86■■■□□ 2.05
SNX17-206ENST00000484886 DCAF11Q8TEB1 546 aa27.84■■■□□ 2.05
SNX17-206ENST00000484886 C19orf44Q9H6X5 657 aa27.82■■■□□ 2.04
SNX17-206ENST00000484886 ATF3P18847 181 aa27.81■■■□□ 2.04
SNX17-206ENST00000484886 HSPA1LP34931 641 aa27.81■■■□□ 2.04
SNX17-206ENST00000484886 NRXN1Q9ULB1 1477 aa27.81■■■□□ 2.04
SNX17-206ENST00000484886 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.81■■■□□ 2.04
SNX17-206ENST00000484886 STK26Q9P289 416 aa27.8■■■□□ 2.04
SNX17-206ENST00000484886 PTCH1Q13635 1447 aa27.8■■■□□ 2.04
SNX17-206ENST00000484886 LAMC1P11047 1609 aa27.79■■■□□ 2.04
SNX17-206ENST00000484886 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
SNX17-206ENST00000484886 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
SNX17-206ENST00000484886 CFAP70Q5T0N1 1121 aa27.77■■■□□ 2.04
SNX17-206ENST00000484886 CADPS2Q86UW7 1296 aa27.77■■■□□ 2.04
SNX17-206ENST00000484886 C14orf93Q9H972 538 aaKnown RBP27.77■■■□□ 2.04
SNX17-206ENST00000484886 SLAIN2Q9P270 581 aa27.77■■■□□ 2.04
SNX17-206ENST00000484886 DHX57Q6P158 1386 aaKnown RBP27.76■■■□□ 2.03
SNX17-206ENST00000484886 ASXL1Q8IXJ9 1541 aa27.76■■■□□ 2.03
SNX17-206ENST00000484886 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
SNX17-206ENST00000484886 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
SNX17-206ENST00000484886 FAM135BQ49AJ0 1406 aa27.74■■■□□ 2.03
SNX17-206ENST00000484886 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
SNX17-206ENST00000484886 NALCNQ8IZF0 1738 aa27.73■■■□□ 2.03
SNX17-206ENST00000484886 STAC3Q96MF2 364 aa27.73■■■□□ 2.03
SNX17-206ENST00000484886 PRAG1Q86YV5 1406 aa27.73■■■□□ 2.03
SNX17-206ENST00000484886 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
SNX17-206ENST00000484886 YTHDC2Q9H6S0 1430 aaKnown RBP27.72■■■□□ 2.03
SNX17-206ENST00000484886 DCCP43146 1447 aa27.71■■■□□ 2.03
SNX17-206ENST00000484886 SIN3AQ96ST3 1273 aa27.71■■■□□ 2.03
SNX17-206ENST00000484886 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.02
SNX17-206ENST00000484886 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
SNX17-206ENST00000484886 TECPR2O15040 1411 aa27.67■■■□□ 2.02
SNX17-206ENST00000484886 WAPLQ7Z5K2 1190 aa27.65■■■□□ 2.02
SNX17-206ENST00000484886 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
SNX17-206ENST00000484886 MST1RQ04912 1400 aa27.62■■■□□ 2.01
SNX17-206ENST00000484886 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
SNX17-206ENST00000484886 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
SNX17-206ENST00000484886 L3MBTL2Q969R5 705 aa27.6■■■□□ 2.01
SNX17-206ENST00000484886 PHLPP1O60346 1717 aa27.59■■■□□ 2.01
SNX17-206ENST00000484886 SAFB2Q14151 953 aaKnown RBP eCLIP27.58■■■□□ 2.01
SNX17-206ENST00000484886 POGKQ9P215 609 aa27.58■■■□□ 2.01
SNX17-206ENST00000484886 TRAK1Q9UPV9 953 aa27.58■■■□□ 2.01
SNX17-206ENST00000484886 BRINP3Q76B58 766 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms