RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 XIRP1Q702N8 1843 aaKnown RBP18.45■□□□□ 0.54
MSH5-216ENST00000484309 TRPM2O94759 1503 aa18.44■□□□□ 0.54
MSH5-216ENST00000484309 NUTM2DQ5VT03 806 aaPredicted RBP18.43■□□□□ 0.54
MSH5-216ENST00000484309 BCANQ96GW7 911 aa18.43■□□□□ 0.54
MSH5-216ENST00000484309 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
MSH5-216ENST00000484309 PPP1R15AO75807 674 aaPredicted RBP18.42■□□□□ 0.54
MSH5-216ENST00000484309 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
MSH5-216ENST00000484309 LRRC7Q96NW7 1537 aa18.42■□□□□ 0.54
MSH5-216ENST00000484309 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
MSH5-216ENST00000484309 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.53
MSH5-216ENST00000484309 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
MSH5-216ENST00000484309 FOXD1Q16676 465 aa18.37■□□□□ 0.53
MSH5-216ENST00000484309 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
MSH5-216ENST00000484309 SETD5Q9C0A6 1442 aa18.36■□□□□ 0.53
MSH5-216ENST00000484309 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
MSH5-216ENST00000484309 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
MSH5-216ENST00000484309 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
MSH5-216ENST00000484309 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
MSH5-216ENST00000484309 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
MSH5-216ENST00000484309 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
MSH5-216ENST00000484309 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
MSH5-216ENST00000484309 PIP4K2BP78356 416 aa18.33■□□□□ 0.52
MSH5-216ENST00000484309 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
MSH5-216ENST00000484309 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
MSH5-216ENST00000484309 PPLO60437 1756 aa18.32■□□□□ 0.52
MSH5-216ENST00000484309 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
MSH5-216ENST00000484309 KCNA6P17658 529 aa18.31■□□□□ 0.52
MSH5-216ENST00000484309 RBM33Q96EV2 1170 aaKnown RBP18.31■□□□□ 0.52
MSH5-216ENST00000484309 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
MSH5-216ENST00000484309 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
MSH5-216ENST00000484309 TOM1O60784 492 aa18.29■□□□□ 0.52
MSH5-216ENST00000484309 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
MSH5-216ENST00000484309 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
MSH5-216ENST00000484309 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
MSH5-216ENST00000484309 TBX22Q9Y458 520 aa18.26■□□□□ 0.51
MSH5-216ENST00000484309 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
MSH5-216ENST00000484309 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
MSH5-216ENST00000484309 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
MSH5-216ENST00000484309 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
MSH5-216ENST00000484309 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
MSH5-216ENST00000484309 HSPA1LP34931 641 aa18.21■□□□□ 0.51
MSH5-216ENST00000484309 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
MSH5-216ENST00000484309 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.19■□□□□ 0.5
MSH5-216ENST00000484309 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
MSH5-216ENST00000484309 METP08581 1390 aa18.18■□□□□ 0.5
MSH5-216ENST00000484309 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
MSH5-216ENST00000484309 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
MSH5-216ENST00000484309 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
MSH5-216ENST00000484309 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
MSH5-216ENST00000484309 MSH6P52701 1360 aa18.17■□□□□ 0.5
MSH5-216ENST00000484309 C14orf37Q86TY3 774 aa18.16■□□□□ 0.5
MSH5-216ENST00000484309 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
MSH5-216ENST00000484309 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
MSH5-216ENST00000484309 NALCNQ8IZF0 1738 aa18.13■□□□□ 0.49
MSH5-216ENST00000484309 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
MSH5-216ENST00000484309 DISP3Q9P2K9 1392 aa18.11■□□□□ 0.49
MSH5-216ENST00000484309 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
MSH5-216ENST00000484309 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
MSH5-216ENST00000484309 ANKRD30BQ9BXX2 1392 aa18.09■□□□□ 0.49
MSH5-216ENST00000484309 FAM135BQ49AJ0 1406 aa18.08■□□□□ 0.49
MSH5-216ENST00000484309 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.48
MSH5-216ENST00000484309 HRCP23327 699 aa18.07■□□□□ 0.48
MSH5-216ENST00000484309 ASXL1Q8IXJ9 1541 aa18.07■□□□□ 0.48
MSH5-216ENST00000484309 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
MSH5-216ENST00000484309 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
MSH5-216ENST00000484309 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
MSH5-216ENST00000484309 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
MSH5-216ENST00000484309 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
MSH5-216ENST00000484309 ATF3P18847 181 aa18.04■□□□□ 0.48
MSH5-216ENST00000484309 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
MSH5-216ENST00000484309 ADGRL3Q9HAR2 1447 aa18.04■□□□□ 0.48
MSH5-216ENST00000484309 MYOM2P54296 1465 aa18.03■□□□□ 0.48
MSH5-216ENST00000484309 LAMC1P11047 1609 aa18.03■□□□□ 0.48
MSH5-216ENST00000484309 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.48
MSH5-216ENST00000484309 DCCP43146 1447 aa18.01■□□□□ 0.47
MSH5-216ENST00000484309 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
MSH5-216ENST00000484309 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
MSH5-216ENST00000484309 STK26Q9P289 416 aa18■□□□□ 0.47
MSH5-216ENST00000484309 COL16A1Q07092 1604 aaPredicted RBP18■□□□□ 0.47
MSH5-216ENST00000484309 MST1RQ04912 1400 aa17.99■□□□□ 0.47
MSH5-216ENST00000484309 PRAG1Q86YV5 1406 aa17.99■□□□□ 0.47
MSH5-216ENST00000484309 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
MSH5-216ENST00000484309 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
MSH5-216ENST00000484309 NHSL1Q5SYE7 1610 aa17.97■□□□□ 0.47
MSH5-216ENST00000484309 AHDC1Q5TGY3 1603 aaPredicted RBP17.97■□□□□ 0.47
MSH5-216ENST00000484309 LRPPRCP42704 1394 aaKnown RBP17.96■□□□□ 0.47
MSH5-216ENST00000484309 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
MSH5-216ENST00000484309 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
MSH5-216ENST00000484309 TECPR2O15040 1411 aa17.95■□□□□ 0.46
MSH5-216ENST00000484309 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
MSH5-216ENST00000484309 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
MSH5-216ENST00000484309 BRINP3Q76B58 766 aa17.94■□□□□ 0.46
MSH5-216ENST00000484309 C14orf93Q9H972 538 aaKnown RBP17.94■□□□□ 0.46
MSH5-216ENST00000484309 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
MSH5-216ENST00000484309 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
MSH5-216ENST00000484309 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
MSH5-216ENST00000484309 C1orf167Q5SNV9 1468 aa17.92■□□□□ 0.46
MSH5-216ENST00000484309 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
MSH5-216ENST00000484309 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
MSH5-216ENST00000484309 SHPRHQ149N8 1683 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms