RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 RIMS2Q9UQ26 1411 aa39.33■■■■□ 3.89
GTF3C4-202ENST00000483873 ZNF335Q9H4Z2 1342 aaPredicted RBP39.33■■■■□ 3.89
GTF3C4-202ENST00000483873 CERKQ8TCT0 537 aa39.3■■■■□ 3.88
GTF3C4-202ENST00000483873 HRCP23327 699 aa39.28■■■■□ 3.88
GTF3C4-202ENST00000483873 NUTM2DQ5VT03 806 aaPredicted RBP39.22■■■■□ 3.87
GTF3C4-202ENST00000483873 SENP3Q9H4L4 574 aaPredicted RBP39.2■■■■□ 3.87
GTF3C4-202ENST00000483873 STRCP1A6NGW2 1772 aa39.2■■■■□ 3.87
GTF3C4-202ENST00000483873 PPP1R15AO75807 674 aaPredicted RBP39.18■■■■□ 3.86
GTF3C4-202ENST00000483873 ZNF326Q5BKZ1 582 aaKnown RBP39.18■■■■□ 3.86
GTF3C4-202ENST00000483873 CCDC144AA2RUR9 1427 aa39.18■■■■□ 3.86
GTF3C4-202ENST00000483873 NEXMIFQ5QGS0 1516 aa39.16■■■■□ 3.86
GTF3C4-202ENST00000483873 PLEKHG1Q9ULL1 1385 aa39.16■■■■□ 3.86
GTF3C4-202ENST00000483873 HDGFP51858 240 aaKnown RBP39.15■■■■□ 3.86
GTF3C4-202ENST00000483873 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.15■■■■□ 3.86
GTF3C4-202ENST00000483873 TRIM26Q12899 539 aaPredicted RBP39.14■■■■□ 3.86
GTF3C4-202ENST00000483873 SLC26A8Q96RN1 970 aa39.12■■■■□ 3.85
GTF3C4-202ENST00000483873 BCANQ96GW7 911 aa39.11■■■■□ 3.85
GTF3C4-202ENST00000483873 CPS1P31327 1500 aa39.07■■■■□ 3.85
GTF3C4-202ENST00000483873 PPLO60437 1756 aa39.07■■■■□ 3.84
GTF3C4-202ENST00000483873 NRXN3Q9Y4C0 1643 aa39.05■■■■□ 3.84
GTF3C4-202ENST00000483873 SPATA31E1Q6ZUB1 1445 aa39.04■■■■□ 3.84
GTF3C4-202ENST00000483873 ANKRD30BQ9BXX2 1392 aa39.04■■■■□ 3.84
GTF3C4-202ENST00000483873 ADAMTS13Q76LX8 1427 aa39.03■■■■□ 3.84
GTF3C4-202ENST00000483873 IFT172Q9UG01 1749 aa39■■■■□ 3.83
GTF3C4-202ENST00000483873 DIP2AQ14689 1571 aa38.99■■■■□ 3.83
GTF3C4-202ENST00000483873 SETBP1Q9Y6X0 1596 aa38.99■■■■□ 3.83
GTF3C4-202ENST00000483873 IQSEC2Q5JU85 1478 aa38.99■■■■□ 3.83
GTF3C4-202ENST00000483873 CHD2O14647 1828 aaKnown RBP38.97■■■■□ 3.83
GTF3C4-202ENST00000483873 RGL3Q3MIN7 710 aa38.97■■■■□ 3.83
GTF3C4-202ENST00000483873 NWD1Q149M9 1564 aa38.95■■■■□ 3.83
GTF3C4-202ENST00000483873 RPGRIP1LQ68CZ1 1315 aa38.94■■■■□ 3.82
GTF3C4-202ENST00000483873 LRRC7Q96NW7 1537 aa38.94■■■■□ 3.82
GTF3C4-202ENST00000483873 TBX22Q9Y458 520 aa38.93■■■■□ 3.82
GTF3C4-202ENST00000483873 XIRP1Q702N8 1843 aaKnown RBP38.91■■■■□ 3.82
GTF3C4-202ENST00000483873 KCNA6P17658 529 aa38.89■■■■□ 3.82
GTF3C4-202ENST00000483873 VGFO15240 615 aaPredicted RBP38.87■■■■□ 3.81
GTF3C4-202ENST00000483873 SETD1AO15047 1707 aaKnown RBP38.86■■■■□ 3.81
GTF3C4-202ENST00000483873 NKTRP30414 1462 aaKnown RBP38.83■■■■□ 3.81
GTF3C4-202ENST00000483873 PTPRUQ92729 1446 aa38.8■■■■□ 3.8
GTF3C4-202ENST00000483873 ADGRF5Q8IZF2 1346 aa38.8■■■■□ 3.8
GTF3C4-202ENST00000483873 PIK3R4Q99570 1358 aa38.8■■■■□ 3.8
GTF3C4-202ENST00000483873 ALKQ9UM73 1620 aa38.79■■■■□ 3.8
GTF3C4-202ENST00000483873 METP08581 1390 aa38.78■■■■□ 3.8
GTF3C4-202ENST00000483873 XRN1Q8IZH2 1706 aaKnown RBP38.76■■■■□ 3.8
GTF3C4-202ENST00000483873 DHX57Q6P158 1386 aaKnown RBP38.74■■■■□ 3.79
GTF3C4-202ENST00000483873 RBM33Q96EV2 1170 aaKnown RBP38.73■■■■□ 3.79
GTF3C4-202ENST00000483873 TMEM94Q12767 1356 aa38.73■■■■□ 3.79
GTF3C4-202ENST00000483873 PROSER2Q86WR7 435 aaPredicted RBP38.72■■■■□ 3.79
GTF3C4-202ENST00000483873 UBAP1LF5GYI3 381 aa38.71■■■■□ 3.79
GTF3C4-202ENST00000483873 MYOM2P54296 1465 aa38.7■■■■□ 3.79
GTF3C4-202ENST00000483873 AMOTL2Q9Y2J4 779 aa38.7■■■■□ 3.79
GTF3C4-202ENST00000483873 PIK3C2GO75747 1445 aa38.69■■■■□ 3.78
GTF3C4-202ENST00000483873 NRXN1Q9ULB1 1477 aa38.66■■■■□ 3.78
GTF3C4-202ENST00000483873 PCGF6Q9BYE7 350 aa38.61■■■■□ 3.77
GTF3C4-202ENST00000483873 ASXL1Q8IXJ9 1541 aa38.61■■■■□ 3.77
GTF3C4-202ENST00000483873 DCAF11Q8TEB1 546 aa38.58■■■■□ 3.77
GTF3C4-202ENST00000483873 TOM1O60784 492 aa38.57■■■■□ 3.77
GTF3C4-202ENST00000483873 KDM2AQ9Y2K7 1162 aa38.57■■■■□ 3.77
GTF3C4-202ENST00000483873 SIN3AQ96ST3 1273 aa38.56■■■■□ 3.76
GTF3C4-202ENST00000483873 LAMC1P11047 1609 aa38.56■■■■□ 3.76
GTF3C4-202ENST00000483873 PIP4K2BP78356 416 aa38.52■■■■□ 3.76
GTF3C4-202ENST00000483873 MSH6P52701 1360 aa38.5■■■■□ 3.75
GTF3C4-202ENST00000483873 SCAF1Q9H7N4 1312 aaKnown RBP38.5■■■■□ 3.75
GTF3C4-202ENST00000483873 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.5■■■■□ 3.75
GTF3C4-202ENST00000483873 NCOA3Q9Y6Q9 1424 aa38.5■■■■□ 3.75
GTF3C4-202ENST00000483873 CFAP70Q5T0N1 1121 aa38.49■■■■□ 3.75
GTF3C4-202ENST00000483873 TMEM132EQ6IEE7 984 aa38.49■■■■□ 3.75
GTF3C4-202ENST00000483873 C14orf93Q9H972 538 aaKnown RBP38.49■■■■□ 3.75
GTF3C4-202ENST00000483873 PTCH1Q13635 1447 aa38.48■■■■□ 3.75
GTF3C4-202ENST00000483873 PRAG1Q86YV5 1406 aa38.48■■■■□ 3.75
GTF3C4-202ENST00000483873 ROBO2Q9HCK4 1378 aa38.47■■■■□ 3.75
GTF3C4-202ENST00000483873 KNDC1Q76NI1 1749 aa38.47■■■■□ 3.75
GTF3C4-202ENST00000483873 C14orf37Q86TY3 774 aa38.46■■■■□ 3.75
GTF3C4-202ENST00000483873 NALCNQ8IZF0 1738 aa38.46■■■■□ 3.75
GTF3C4-202ENST00000483873 NEUROD1Q13562 356 aa38.46■■■■□ 3.75
GTF3C4-202ENST00000483873 LRPPRCP42704 1394 aaKnown RBP38.42■■■■□ 3.74
GTF3C4-202ENST00000483873 STAC3Q96MF2 364 aa38.42■■■■□ 3.74
GTF3C4-202ENST00000483873 STK26Q9P289 416 aa38.42■■■■□ 3.74
GTF3C4-202ENST00000483873 YTHDC2Q9H6S0 1430 aaKnown RBP38.4■■■■□ 3.74
GTF3C4-202ENST00000483873 TECPR2O15040 1411 aa38.39■■■■□ 3.74
GTF3C4-202ENST00000483873 ADGRB1O14514 1584 aa38.38■■■■□ 3.73
GTF3C4-202ENST00000483873 C19orf44Q9H6X5 657 aa38.37■■■■□ 3.73
GTF3C4-202ENST00000483873 ADGRL3Q9HAR2 1447 aa38.36■■■■□ 3.73
GTF3C4-202ENST00000483873 L3MBTL2Q969R5 705 aa38.36■■■■□ 3.73
GTF3C4-202ENST00000483873 ABCC11Q96J66 1382 aa38.36■■■■□ 3.73
GTF3C4-202ENST00000483873 ROBO1Q9Y6N7 1651 aa38.33■■■■□ 3.73
GTF3C4-202ENST00000483873 DCCP43146 1447 aa38.31■■■■□ 3.72
GTF3C4-202ENST00000483873 KIAA1210Q9ULL0 1709 aa38.3■■■■□ 3.72
GTF3C4-202ENST00000483873 ATF3P18847 181 aa38.29■■■■□ 3.72
GTF3C4-202ENST00000483873 PLEKHH1Q9ULM0 1364 aa38.28■■■■□ 3.72
GTF3C4-202ENST00000483873 WAPLQ7Z5K2 1190 aa38.28■■■■□ 3.72
GTF3C4-202ENST00000483873 CADPS2Q86UW7 1296 aa38.28■■■■□ 3.72
GTF3C4-202ENST00000483873 SLAIN2Q9P270 581 aa38.27■■■■□ 3.72
GTF3C4-202ENST00000483873 FAM135BQ49AJ0 1406 aa38.26■■■■□ 3.72
GTF3C4-202ENST00000483873 HSPA1LP34931 641 aa38.25■■■■□ 3.71
GTF3C4-202ENST00000483873 DISP3Q9P2K9 1392 aa38.24■■■■□ 3.71
GTF3C4-202ENST00000483873 DLC1Q96QB1 1528 aa38.22■■■■□ 3.71
GTF3C4-202ENST00000483873 MST1RQ04912 1400 aa38.2■■■■□ 3.71
GTF3C4-202ENST00000483873 ARHGEF28Q8N1W1 1705 aaKnown RBP38.18■■■■□ 3.7
GTF3C4-202ENST00000483873 TRAK1Q9UPV9 953 aa38.18■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms