RNA–Protein interactions for RNA: ENST00000483814.1

PKD1-217, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-217ENST00000483814 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
PKD1-217ENST00000483814 PPP1R15AO75807 674 aaPredicted RBP28.36■■■□□ 2.13
PKD1-217ENST00000483814 FOXD1Q16676 465 aa28.36■■■□□ 2.13
PKD1-217ENST00000483814 MPHOSPH9Q99550 1183 aa28.36■■■□□ 2.13
PKD1-217ENST00000483814 HDGFP51858 240 aaKnown RBP28.35■■■□□ 2.13
PKD1-217ENST00000483814 BCANQ96GW7 911 aa28.35■■■□□ 2.13
PKD1-217ENST00000483814 STRCP1A6NGW2 1772 aa28.34■■■□□ 2.13
PKD1-217ENST00000483814 NUTM2DQ5VT03 806 aaPredicted RBP28.34■■■□□ 2.13
PKD1-217ENST00000483814 CPS1P31327 1500 aa28.33■■■□□ 2.13
PKD1-217ENST00000483814 ACIN1Q9UKV3 1341 aaKnown RBP28.32■■■□□ 2.12
PKD1-217ENST00000483814 IQSEC2Q5JU85 1478 aa28.32■■■□□ 2.12
PKD1-217ENST00000483814 ZNF326Q5BKZ1 582 aaKnown RBP28.31■■■□□ 2.12
PKD1-217ENST00000483814 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.31■■■□□ 2.12
PKD1-217ENST00000483814 SLC26A8Q96RN1 970 aa28.3■■■□□ 2.12
PKD1-217ENST00000483814 PLEKHG1Q9ULL1 1385 aa28.28■■■□□ 2.12
PKD1-217ENST00000483814 CCDC144AA2RUR9 1427 aa28.21■■■□□ 2.11
PKD1-217ENST00000483814 NEXMIFQ5QGS0 1516 aa28.2■■■□□ 2.1
PKD1-217ENST00000483814 LRRC7Q96NW7 1537 aa28.19■■■□□ 2.1
PKD1-217ENST00000483814 UBAP1LF5GYI3 381 aa28.17■■■□□ 2.1
PKD1-217ENST00000483814 CHD2O14647 1828 aaKnown RBP28.16■■■□□ 2.1
PKD1-217ENST00000483814 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
PKD1-217ENST00000483814 DIP2AQ14689 1571 aa28.16■■■□□ 2.1
PKD1-217ENST00000483814 KCNA6P17658 529 aa28.15■■■□□ 2.1
PKD1-217ENST00000483814 HRCP23327 699 aa28.15■■■□□ 2.1
PKD1-217ENST00000483814 XIRP1Q702N8 1843 aaKnown RBP28.14■■■□□ 2.1
PKD1-217ENST00000483814 TBX22Q9Y458 520 aa28.14■■■□□ 2.1
PKD1-217ENST00000483814 NRXN3Q9Y4C0 1643 aa28.14■■■□□ 2.09
PKD1-217ENST00000483814 NWD1Q149M9 1564 aa28.13■■■□□ 2.09
PKD1-217ENST00000483814 PPLO60437 1756 aa28.13■■■□□ 2.09
PKD1-217ENST00000483814 SETBP1Q9Y6X0 1596 aa28.11■■■□□ 2.09
PKD1-217ENST00000483814 RGL3Q3MIN7 710 aa28.09■■■□□ 2.09
PKD1-217ENST00000483814 RPGRIP1LQ68CZ1 1315 aa28.08■■■□□ 2.09
PKD1-217ENST00000483814 NKTRP30414 1462 aaKnown RBP28.08■■■□□ 2.09
PKD1-217ENST00000483814 PROSER2Q86WR7 435 aaPredicted RBP28.07■■■□□ 2.08
PKD1-217ENST00000483814 VGFO15240 615 aaPredicted RBP28.06■■■□□ 2.08
PKD1-217ENST00000483814 TOM1O60784 492 aa28.06■■■□□ 2.08
PKD1-217ENST00000483814 SPATA31E1Q6ZUB1 1445 aa28.06■■■□□ 2.08
PKD1-217ENST00000483814 TMEM94Q12767 1356 aa28.05■■■□□ 2.08
PKD1-217ENST00000483814 RBM33Q96EV2 1170 aaKnown RBP28.05■■■□□ 2.08
PKD1-217ENST00000483814 IFT172Q9UG01 1749 aa28.04■■■□□ 2.08
PKD1-217ENST00000483814 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
PKD1-217ENST00000483814 PIK3R4Q99570 1358 aa28.03■■■□□ 2.08
PKD1-217ENST00000483814 PIP4K2BP78356 416 aa28.02■■■□□ 2.08
PKD1-217ENST00000483814 ANKRD30BQ9BXX2 1392 aa28.01■■■□□ 2.07
PKD1-217ENST00000483814 PTPRUQ92729 1446 aa28■■■□□ 2.07
PKD1-217ENST00000483814 ALKQ9UM73 1620 aa28■■■□□ 2.07
PKD1-217ENST00000483814 AMOTL2Q9Y2J4 779 aa27.98■■■□□ 2.07
PKD1-217ENST00000483814 METP08581 1390 aa27.98■■■□□ 2.07
PKD1-217ENST00000483814 SETD1AO15047 1707 aaKnown RBP27.97■■■□□ 2.07
PKD1-217ENST00000483814 XRN1Q8IZH2 1706 aaKnown RBP27.95■■■□□ 2.07
PKD1-217ENST00000483814 ADGRF5Q8IZF2 1346 aa27.94■■■□□ 2.06
PKD1-217ENST00000483814 TRIM26Q12899 539 aaPredicted RBP27.93■■■□□ 2.06
PKD1-217ENST00000483814 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
PKD1-217ENST00000483814 MSH6P52701 1360 aa27.9■■■□□ 2.06
PKD1-217ENST00000483814 PIK3C2GO75747 1445 aa27.84■■■□□ 2.05
PKD1-217ENST00000483814 NCOA3Q9Y6Q9 1424 aa27.84■■■□□ 2.05
PKD1-217ENST00000483814 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.84■■■□□ 2.05
PKD1-217ENST00000483814 MYOM2P54296 1465 aa27.83■■■□□ 2.05
PKD1-217ENST00000483814 HSPA1LP34931 641 aa27.82■■■□□ 2.04
PKD1-217ENST00000483814 NRXN1Q9ULB1 1477 aa27.79■■■□□ 2.04
PKD1-217ENST00000483814 KDM2AQ9Y2K7 1162 aa27.79■■■□□ 2.04
PKD1-217ENST00000483814 DCAF11Q8TEB1 546 aa27.78■■■□□ 2.04
PKD1-217ENST00000483814 C19orf44Q9H6X5 657 aa27.78■■■□□ 2.04
PKD1-217ENST00000483814 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
PKD1-217ENST00000483814 LAMC1P11047 1609 aa27.77■■■□□ 2.04
PKD1-217ENST00000483814 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
PKD1-217ENST00000483814 PTCH1Q13635 1447 aa27.76■■■□□ 2.04
PKD1-217ENST00000483814 ROBO2Q9HCK4 1378 aa27.76■■■□□ 2.03
PKD1-217ENST00000483814 NALCNQ8IZF0 1738 aa27.76■■■□□ 2.03
PKD1-217ENST00000483814 ATF3P18847 181 aa27.76■■■□□ 2.03
PKD1-217ENST00000483814 TMEM132EQ6IEE7 984 aa27.76■■■□□ 2.03
PKD1-217ENST00000483814 STK26Q9P289 416 aa27.75■■■□□ 2.03
PKD1-217ENST00000483814 SLAIN2Q9P270 581 aa27.74■■■□□ 2.03
PKD1-217ENST00000483814 FAM135BQ49AJ0 1406 aa27.74■■■□□ 2.03
PKD1-217ENST00000483814 CFAP70Q5T0N1 1121 aa27.73■■■□□ 2.03
PKD1-217ENST00000483814 CADPS2Q86UW7 1296 aa27.73■■■□□ 2.03
PKD1-217ENST00000483814 C14orf93Q9H972 538 aaKnown RBP27.73■■■□□ 2.03
PKD1-217ENST00000483814 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
PKD1-217ENST00000483814 PRAG1Q86YV5 1406 aa27.72■■■□□ 2.03
PKD1-217ENST00000483814 ADGRL3Q9HAR2 1447 aa27.72■■■□□ 2.03
PKD1-217ENST00000483814 KNDC1Q76NI1 1749 aa27.71■■■□□ 2.03
PKD1-217ENST00000483814 LRPPRCP42704 1394 aaKnown RBP27.7■■■□□ 2.02
PKD1-217ENST00000483814 DCCP43146 1447 aa27.68■■■□□ 2.02
PKD1-217ENST00000483814 YTHDC2Q9H6S0 1430 aaKnown RBP27.68■■■□□ 2.02
PKD1-217ENST00000483814 TECPR2O15040 1411 aa27.66■■■□□ 2.02
PKD1-217ENST00000483814 STAC3Q96MF2 364 aa27.65■■■□□ 2.02
PKD1-217ENST00000483814 SIN3AQ96ST3 1273 aa27.65■■■□□ 2.02
PKD1-217ENST00000483814 ABCC11Q96J66 1382 aa27.64■■■□□ 2.02
PKD1-217ENST00000483814 WAPLQ7Z5K2 1190 aa27.63■■■□□ 2.01
PKD1-217ENST00000483814 NEUROD1Q13562 356 aa27.62■■■□□ 2.01
PKD1-217ENST00000483814 PHLPP1O60346 1717 aa27.61■■■□□ 2.01
PKD1-217ENST00000483814 MST1RQ04912 1400 aa27.61■■■□□ 2.01
PKD1-217ENST00000483814 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
PKD1-217ENST00000483814 PLEKHH1Q9ULM0 1364 aa27.6■■■□□ 2.01
PKD1-217ENST00000483814 BRINP3Q76B58 766 aa27.55■■■□□ 2
PKD1-217ENST00000483814 CDC42BPGQ6DT37 1551 aa27.54■■■□□ 2
PKD1-217ENST00000483814 KIAA1210Q9ULL0 1709 aa27.53■■■□□ 2
PKD1-217ENST00000483814 L3MBTL2Q969R5 705 aa27.53■■■□□ 2
PKD1-217ENST00000483814 SIRT1Q96EB6 747 aa27.53■■■□□ 2
PKD1-217ENST00000483814 TRAK1Q9UPV9 953 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms