RNA–Protein interactions for RNA: ENST00000483579.1

CAPN2-208, Transcript of calpain 2, human

TSL 2

Gene CAPN2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN2-208	ENST00000483579	SLC26A8	Q96RN1	970 aa		32.4	■■■□□ 2.78
CAPN2-208	ENST00000483579	SENP3	Q9H4L4	574 aa	Predicted RBP	32.4	■■■□□ 2.78
CAPN2-208	ENST00000483579	LRRC7	Q96NW7	1537 aa		32.39	■■■□□ 2.78
CAPN2-208	ENST00000483579	HDGF	P51858	240 aa	Known RBP	32.38	■■■□□ 2.77
CAPN2-208	ENST00000483579	PLEKHG1	Q9ULL1	1385 aa		32.33	■■■□□ 2.77
CAPN2-208	ENST00000483579	XIRP1	Q702N8	1843 aa	Known RBP	32.33	■■■□□ 2.77
CAPN2-208	ENST00000483579	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.33	■■■□□ 2.77
CAPN2-208	ENST00000483579	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.33	■■■□□ 2.77
CAPN2-208	ENST00000483579	CLTCL1	P53675	1640 aa		32.33	■■■□□ 2.77
CAPN2-208	ENST00000483579	TRPM2	O94759	1503 aa		32.32	■■■□□ 2.76
CAPN2-208	ENST00000483579	TOM1	O60784	492 aa		32.32	■■■□□ 2.76
CAPN2-208	ENST00000483579	KIF1B	O60333	1816 aa		32.32	■■■□□ 2.76
CAPN2-208	ENST00000483579	SCAF1	Q9H7N4	1312 aa	Known RBP	32.31	■■■□□ 2.76
CAPN2-208	ENST00000483579	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.31	■■■□□ 2.76
CAPN2-208	ENST00000483579	PIP4K2B	P78356	416 aa		32.29	■■■□□ 2.76
CAPN2-208	ENST00000483579	CHD2	O14647	1828 aa	Known RBP	32.26	■■■□□ 2.76
CAPN2-208	ENST00000483579	KCNA6	P17658	529 aa		32.26	■■■□□ 2.75
CAPN2-208	ENST00000483579	ZNF326	Q5BKZ1	582 aa	Known RBP	32.25	■■■□□ 2.75
CAPN2-208	ENST00000483579	NWD1	Q149M9	1564 aa		32.24	■■■□□ 2.75
CAPN2-208	ENST00000483579	ALK	Q9UM73	1620 aa		32.23	■■■□□ 2.75
CAPN2-208	ENST00000483579	DIP2A	Q14689	1571 aa		32.19	■■■□□ 2.74
CAPN2-208	ENST00000483579	NKTR	P30414	1462 aa	Known RBP	32.18	■■■□□ 2.74
CAPN2-208	ENST00000483579	PROSER2	Q86WR7	435 aa	Predicted RBP	32.18	■■■□□ 2.74
CAPN2-208	ENST00000483579	TBX22	Q9Y458	520 aa		32.18	■■■□□ 2.74
CAPN2-208	ENST00000483579	TMEM94	Q12767	1356 aa		32.18	■■■□□ 2.74
CAPN2-208	ENST00000483579	ADAMTS13	Q76LX8	1427 aa		32.17	■■■□□ 2.74
CAPN2-208	ENST00000483579	FOXD1	Q16676	465 aa		32.16	■■■□□ 2.74
CAPN2-208	ENST00000483579	SETD5	Q9C0A6	1442 aa		32.16	■■■□□ 2.74
CAPN2-208	ENST00000483579	RBM33	Q96EV2	1170 aa	Known RBP	32.14	■■■□□ 2.74
CAPN2-208	ENST00000483579	NEXMIF	Q5QGS0	1516 aa		32.14	■■■□□ 2.74
CAPN2-208	ENST00000483579	NRXN3	Q9Y4C0	1643 aa		32.12	■■■□□ 2.73
CAPN2-208	ENST00000483579	MPHOSPH9	Q99550	1183 aa		32.12	■■■□□ 2.73
CAPN2-208	ENST00000483579	HSPA1L	P34931	641 aa		32.1	■■■□□ 2.73
CAPN2-208	ENST00000483579	SETBP1	Q9Y6X0	1596 aa		32.09	■■■□□ 2.73
CAPN2-208	ENST00000483579	PIK3R4	Q99570	1358 aa		32.06	■■■□□ 2.72
CAPN2-208	ENST00000483579	RAB3GAP2	Q9H2M9	1393 aa		32.06	■■■□□ 2.72
CAPN2-208	ENST00000483579	ACIN1	Q9UKV3	1341 aa	Known RBP	32.05	■■■□□ 2.72
CAPN2-208	ENST00000483579	PPL	O60437	1756 aa		32.04	■■■□□ 2.72
CAPN2-208	ENST00000483579	CCDC144A	A2RUR9	1427 aa		32.03	■■■□□ 2.72
CAPN2-208	ENST00000483579	MSH6	P52701	1360 aa		32.01	■■■□□ 2.71
CAPN2-208	ENST00000483579	PTPRU	Q92729	1446 aa		32	■■■□□ 2.71
CAPN2-208	ENST00000483579	AMOTL2	Q9Y2J4	779 aa		31.99	■■■□□ 2.71
CAPN2-208	ENST00000483579	DISP3	Q9P2K9	1392 aa		31.98	■■■□□ 2.71
CAPN2-208	ENST00000483579	RPGRIP1L	Q68CZ1	1315 aa		31.97	■■■□□ 2.71
CAPN2-208	ENST00000483579	VGF	O15240	615 aa	Predicted RBP	31.96	■■■□□ 2.71
CAPN2-208	ENST00000483579	C14orf37	Q86TY3	774 aa		31.96	■■■□□ 2.71
CAPN2-208	ENST00000483579	XRN1	Q8IZH2	1706 aa	Known RBP	31.96	■■■□□ 2.71
CAPN2-208	ENST00000483579	MET	P08581	1390 aa		31.94	■■■□□ 2.7
CAPN2-208	ENST00000483579	ROBO1	Q9Y6N7	1651 aa		31.93	■■■□□ 2.7
CAPN2-208	ENST00000483579	SETD1A	O15047	1707 aa	Known RBP	31.92	■■■□□ 2.7
CAPN2-208	ENST00000483579	NCOA3	Q9Y6Q9	1424 aa		31.92	■■■□□ 2.7
CAPN2-208	ENST00000483579	RGL3	Q3MIN7	710 aa		31.91	■■■□□ 2.7
CAPN2-208	ENST00000483579	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.91	■■■□□ 2.7
CAPN2-208	ENST00000483579	FAM135B	Q49AJ0	1406 aa		31.9	■■■□□ 2.7
CAPN2-208	ENST00000483579	IFT172	Q9UG01	1749 aa		31.89	■■■□□ 2.7
CAPN2-208	ENST00000483579	SPATA31E1	Q6ZUB1	1445 aa		31.88	■■■□□ 2.69
CAPN2-208	ENST00000483579	SLAIN2	Q9P270	581 aa		31.85	■■■□□ 2.69
CAPN2-208	ENST00000483579	C19orf44	Q9H6X5	657 aa		31.83	■■■□□ 2.69
CAPN2-208	ENST00000483579	ATF3	P18847	181 aa		31.81	■■■□□ 2.68
CAPN2-208	ENST00000483579	MED1	Q15648	1581 aa	Predicted RBP	31.81	■■■□□ 2.68
CAPN2-208	ENST00000483579	ADGRF5	Q8IZF2	1346 aa		31.79	■■■□□ 2.68
CAPN2-208	ENST00000483579	CADPS2	Q86UW7	1296 aa		31.79	■■■□□ 2.68
CAPN2-208	ENST00000483579	ANKRD30B	Q9BXX2	1392 aa		31.79	■■■□□ 2.68
CAPN2-208	ENST00000483579	HRC	P23327	699 aa		31.77	■■■□□ 2.68
CAPN2-208	ENST00000483579	PHLPP1	O60346	1717 aa		31.76	■■■□□ 2.67
CAPN2-208	ENST00000483579	NALCN	Q8IZF0	1738 aa		31.75	■■■□□ 2.67
CAPN2-208	ENST00000483579	DCC	P43146	1447 aa		31.72	■■■□□ 2.67
CAPN2-208	ENST00000483579	PTCH1	Q13635	1447 aa		31.71	■■■□□ 2.67
CAPN2-208	ENST00000483579	ADGRL3	Q9HAR2	1447 aa		31.7	■■■□□ 2.67
CAPN2-208	ENST00000483579	ROBO2	Q9HCK4	1378 aa		31.68	■■■□□ 2.66
CAPN2-208	ENST00000483579	PIK3C2G	O75747	1445 aa		31.67	■■■□□ 2.66
CAPN2-208	ENST00000483579	ILDR2	Q71H61	639 aa		31.67	■■■□□ 2.66
CAPN2-208	ENST00000483579	PRAG1	Q86YV5	1406 aa		31.65	■■■□□ 2.66
CAPN2-208	ENST00000483579	MYOM2	P54296	1465 aa		31.62	■■■□□ 2.65
CAPN2-208	ENST00000483579	MST1R	Q04912	1400 aa		31.62	■■■□□ 2.65
CAPN2-208	ENST00000483579	COL16A1	Q07092	1604 aa	Predicted RBP	31.61	■■■□□ 2.65
CAPN2-208	ENST00000483579	ASXL1	Q8IXJ9	1541 aa		31.61	■■■□□ 2.65
CAPN2-208	ENST00000483579	STK26	Q9P289	416 aa		31.61	■■■□□ 2.65
CAPN2-208	ENST00000483579	TMEM132E	Q6IEE7	984 aa		31.6	■■■□□ 2.65
CAPN2-208	ENST00000483579	PHF23	Q9BUL5	403 aa	Predicted RBP	31.6	■■■□□ 2.65
CAPN2-208	ENST00000483579	KNDC1	Q76NI1	1749 aa		31.59	■■■□□ 2.65
CAPN2-208	ENST00000483579	BRINP3	Q76B58	766 aa		31.59	■■■□□ 2.65
CAPN2-208	ENST00000483579	LAMC1	P11047	1609 aa		31.59	■■■□□ 2.65
CAPN2-208	ENST00000483579	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.59	■■■□□ 2.65
CAPN2-208	ENST00000483579	NRXN1	Q9ULB1	1477 aa		31.59	■■■□□ 2.65
CAPN2-208	ENST00000483579	LRPPRC	P42704	1394 aa	Known RBP	31.56	■■■□□ 2.64
CAPN2-208	ENST00000483579	C14orf93	Q9H972	538 aa	Known RBP	31.54	■■■□□ 2.64
CAPN2-208	ENST00000483579	TECPR2	O15040	1411 aa		31.53	■■■□□ 2.64
CAPN2-208	ENST00000483579	CFAP70	Q5T0N1	1121 aa		31.53	■■■□□ 2.64
CAPN2-208	ENST00000483579	JCAD	Q9P266	1359 aa		31.53	■■■□□ 2.64
CAPN2-208	ENST00000483579	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.52	■■■□□ 2.64
CAPN2-208	ENST00000483579	NHSL1	Q5SYE7	1610 aa		31.52	■■■□□ 2.64
CAPN2-208	ENST00000483579	ABCC11	Q96J66	1382 aa		31.52	■■■□□ 2.64
CAPN2-208	ENST00000483579	KDM2A	Q9Y2K7	1162 aa		31.51	■■■□□ 2.63
CAPN2-208	ENST00000483579	WAPL	Q7Z5K2	1190 aa		31.5	■■■□□ 2.63
CAPN2-208	ENST00000483579	DCAF11	Q8TEB1	546 aa		31.5	■■■□□ 2.63
CAPN2-208	ENST00000483579	C1orf167	Q5SNV9	1468 aa		31.49	■■■□□ 2.63
CAPN2-208	ENST00000483579	CDC42BPG	Q6DT37	1551 aa		31.47	■■■□□ 2.63
CAPN2-208	ENST00000483579	DHX57	Q6P158	1386 aa	Known RBP	31.46	■■■□□ 2.63
CAPN2-208	ENST00000483579	SHPRH	Q149N8	1683 aa		31.46	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms