RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
HDLBP-239ENST00000483086 CHD2O14647 1828 aaKnown RBP18.36■□□□□ 0.53
HDLBP-239ENST00000483086 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
HDLBP-239ENST00000483086 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
HDLBP-239ENST00000483086 NUTM2DQ5VT03 806 aaPredicted RBP18.33■□□□□ 0.52
HDLBP-239ENST00000483086 NRXN3Q9Y4C0 1643 aa18.33■□□□□ 0.52
HDLBP-239ENST00000483086 TRPM2O94759 1503 aa18.33■□□□□ 0.52
HDLBP-239ENST00000483086 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
HDLBP-239ENST00000483086 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
HDLBP-239ENST00000483086 ADAMTS13Q76LX8 1427 aa18.31■□□□□ 0.52
HDLBP-239ENST00000483086 KIF1BO60333 1816 aa18.29■□□□□ 0.52
HDLBP-239ENST00000483086 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
HDLBP-239ENST00000483086 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
HDLBP-239ENST00000483086 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
HDLBP-239ENST00000483086 KCNA6P17658 529 aa18.26■□□□□ 0.51
HDLBP-239ENST00000483086 HSPA1LP34931 641 aa18.25■□□□□ 0.51
HDLBP-239ENST00000483086 TMEM94Q12767 1356 aa18.25■□□□□ 0.51
HDLBP-239ENST00000483086 TOM1O60784 492 aa18.24■□□□□ 0.51
HDLBP-239ENST00000483086 TRIM52Q96A61 297 aa18.24■□□□□ 0.51
HDLBP-239ENST00000483086 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
HDLBP-239ENST00000483086 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
HDLBP-239ENST00000483086 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
HDLBP-239ENST00000483086 DIP2AQ14689 1571 aa18.23■□□□□ 0.51
HDLBP-239ENST00000483086 FOXD1Q16676 465 aa18.23■□□□□ 0.51
HDLBP-239ENST00000483086 SETBP1Q9Y6X0 1596 aa18.22■□□□□ 0.51
HDLBP-239ENST00000483086 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
HDLBP-239ENST00000483086 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
HDLBP-239ENST00000483086 BCANQ96GW7 911 aa18.21■□□□□ 0.51
HDLBP-239ENST00000483086 PPLO60437 1756 aa18.2■□□□□ 0.5
HDLBP-239ENST00000483086 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
HDLBP-239ENST00000483086 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
HDLBP-239ENST00000483086 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
HDLBP-239ENST00000483086 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
HDLBP-239ENST00000483086 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
HDLBP-239ENST00000483086 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
HDLBP-239ENST00000483086 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
HDLBP-239ENST00000483086 HDGFP51858 240 aaKnown RBP18.16■□□□□ 0.5
HDLBP-239ENST00000483086 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
HDLBP-239ENST00000483086 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
HDLBP-239ENST00000483086 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
HDLBP-239ENST00000483086 METP08581 1390 aa18.15■□□□□ 0.5
HDLBP-239ENST00000483086 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
HDLBP-239ENST00000483086 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
HDLBP-239ENST00000483086 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
HDLBP-239ENST00000483086 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
HDLBP-239ENST00000483086 PIK3R4Q99570 1358 aa18.13■□□□□ 0.49
HDLBP-239ENST00000483086 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
HDLBP-239ENST00000483086 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
HDLBP-239ENST00000483086 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
HDLBP-239ENST00000483086 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
HDLBP-239ENST00000483086 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
HDLBP-239ENST00000483086 MSH6P52701 1360 aa18.08■□□□□ 0.49
HDLBP-239ENST00000483086 NCOA3Q9Y6Q9 1424 aa18.06■□□□□ 0.48
HDLBP-239ENST00000483086 CCDC144AA2RUR9 1427 aa18.05■□□□□ 0.48
HDLBP-239ENST00000483086 PHLPP1O60346 1717 aa18.04■□□□□ 0.48
HDLBP-239ENST00000483086 ASXL1Q8IXJ9 1541 aa18.03■□□□□ 0.48
HDLBP-239ENST00000483086 ADGRF5Q8IZF2 1346 aa18.03■□□□□ 0.48
HDLBP-239ENST00000483086 SLAIN2Q9P270 581 aa18.03■□□□□ 0.48
HDLBP-239ENST00000483086 COL16A1Q07092 1604 aaPredicted RBP18.02■□□□□ 0.48
HDLBP-239ENST00000483086 RPGRIP1LQ68CZ1 1315 aa18.01■□□□□ 0.47
HDLBP-239ENST00000483086 RGL3Q3MIN7 710 aa18■□□□□ 0.47
HDLBP-239ENST00000483086 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
HDLBP-239ENST00000483086 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-239ENST00000483086 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
HDLBP-239ENST00000483086 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
HDLBP-239ENST00000483086 MST1RQ04912 1400 aa17.98■□□□□ 0.47
HDLBP-239ENST00000483086 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
HDLBP-239ENST00000483086 AHDC1Q5TGY3 1603 aaPredicted RBP17.97■□□□□ 0.47
HDLBP-239ENST00000483086 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
HDLBP-239ENST00000483086 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
HDLBP-239ENST00000483086 PIK3C2GO75747 1445 aa17.96■□□□□ 0.47
HDLBP-239ENST00000483086 DCCP43146 1447 aa17.96■□□□□ 0.47
HDLBP-239ENST00000483086 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
HDLBP-239ENST00000483086 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
HDLBP-239ENST00000483086 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
HDLBP-239ENST00000483086 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
HDLBP-239ENST00000483086 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
HDLBP-239ENST00000483086 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
HDLBP-239ENST00000483086 ATF3P18847 181 aa17.92■□□□□ 0.46
HDLBP-239ENST00000483086 RGS17Q9UGC6 210 aaPredicted RBP17.92■□□□□ 0.46
HDLBP-239ENST00000483086 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
HDLBP-239ENST00000483086 MYOM2P54296 1465 aa17.9■□□□□ 0.46
HDLBP-239ENST00000483086 TMEM132EQ6IEE7 984 aa17.9■□□□□ 0.46
HDLBP-239ENST00000483086 DDX17Q92841 729 aaKnown RBP17.89■□□□□ 0.45
HDLBP-239ENST00000483086 LRP6O75581 1613 aa17.89■□□□□ 0.45
HDLBP-239ENST00000483086 PLEKHH1Q9ULM0 1364 aa17.89■□□□□ 0.45
HDLBP-239ENST00000483086 TECPR2O15040 1411 aa17.89■□□□□ 0.45
HDLBP-239ENST00000483086 HRCP23327 699 aa17.88■□□□□ 0.45
HDLBP-239ENST00000483086 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
HDLBP-239ENST00000483086 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
HDLBP-239ENST00000483086 LAMC1P11047 1609 aa17.87■□□□□ 0.45
HDLBP-239ENST00000483086 WAPLQ7Z5K2 1190 aa17.86■□□□□ 0.45
HDLBP-239ENST00000483086 LRPPRCP42704 1394 aaKnown RBP17.86■□□□□ 0.45
HDLBP-239ENST00000483086 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
HDLBP-239ENST00000483086 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
HDLBP-239ENST00000483086 YTHDC2Q9H6S0 1430 aaKnown RBP17.85■□□□□ 0.45
HDLBP-239ENST00000483086 JCADQ9P266 1359 aa17.85■□□□□ 0.45
HDLBP-239ENST00000483086 STK26Q9P289 416 aa17.85■□□□□ 0.45
HDLBP-239ENST00000483086 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
HDLBP-239ENST00000483086 ADGRB1O14514 1584 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms