RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 PIP4K2BP78356 416 aa34.28■■■■□ 3.08
CYTH3-208ENST00000482460 BCANQ96GW7 911 aa34.28■■■■□ 3.08
CYTH3-208ENST00000482460 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.27■■■■□ 3.08
CYTH3-208ENST00000482460 SCAF1Q9H7N4 1312 aaKnown RBP34.27■■■■□ 3.08
CYTH3-208ENST00000482460 PLEKHG1Q9ULL1 1385 aa34.26■■■■□ 3.08
CYTH3-208ENST00000482460 PPP1R15AO75807 674 aaPredicted RBP34.26■■■■□ 3.08
CYTH3-208ENST00000482460 KCNA6P17658 529 aa34.26■■■■□ 3.08
CYTH3-208ENST00000482460 SPHKAPQ2M3C7 1700 aa34.25■■■■□ 3.07
CYTH3-208ENST00000482460 ALKQ9UM73 1620 aa34.22■■■■□ 3.07
CYTH3-208ENST00000482460 TRIM52Q96A61 297 aa34.21■■■■□ 3.07
CYTH3-208ENST00000482460 XIRP1Q702N8 1843 aaKnown RBP34.19■■■■□ 3.06
CYTH3-208ENST00000482460 SENP3Q9H4L4 574 aaPredicted RBP34.19■■■■□ 3.06
CYTH3-208ENST00000482460 NUTM2DQ5VT03 806 aaPredicted RBP34.16■■■■□ 3.06
CYTH3-208ENST00000482460 TBX22Q9Y458 520 aa34.15■■■■□ 3.06
CYTH3-208ENST00000482460 HSPA1LP34931 641 aa34.13■■■■□ 3.05
CYTH3-208ENST00000482460 PROSER2Q86WR7 435 aaPredicted RBP34.13■■■■□ 3.05
CYTH3-208ENST00000482460 NWD1Q149M9 1564 aa34.13■■■■□ 3.05
CYTH3-208ENST00000482460 TMEM94Q12767 1356 aa34.12■■■■□ 3.05
CYTH3-208ENST00000482460 TRPM2O94759 1503 aa34.1■■■■□ 3.05
CYTH3-208ENST00000482460 NKTRP30414 1462 aaKnown RBP34.1■■■■□ 3.05
CYTH3-208ENST00000482460 CHD2O14647 1828 aaKnown RBP34.1■■■■□ 3.05
CYTH3-208ENST00000482460 SLC4A1APQ9BWU0 796 aaKnown RBP34.1■■■■□ 3.05
CYTH3-208ENST00000482460 DISP3Q9P2K9 1392 aa34.09■■■■□ 3.05
CYTH3-208ENST00000482460 ADAMTS13Q76LX8 1427 aa34.08■■■■□ 3.05
CYTH3-208ENST00000482460 CLTCL1P53675 1640 aa34.08■■■■□ 3.05
CYTH3-208ENST00000482460 ZNF326Q5BKZ1 582 aaKnown RBP34.07■■■■□ 3.04
CYTH3-208ENST00000482460 DIP2AQ14689 1571 aa34.05■■■■□ 3.04
CYTH3-208ENST00000482460 RBM33Q96EV2 1170 aaKnown RBP34.04■■■■□ 3.04
CYTH3-208ENST00000482460 KIF1BO60333 1816 aa34.02■■■■□ 3.04
CYTH3-208ENST00000482460 PIK3R4Q99570 1358 aa34.01■■■■□ 3.04
CYTH3-208ENST00000482460 MSH6P52701 1360 aa33.94■■■■□ 3.02
CYTH3-208ENST00000482460 NEXMIFQ5QGS0 1516 aa33.94■■■■□ 3.02
CYTH3-208ENST00000482460 SETBP1Q9Y6X0 1596 aa33.94■■■■□ 3.02
CYTH3-208ENST00000482460 NRXN3Q9Y4C0 1643 aa33.93■■■■□ 3.02
CYTH3-208ENST00000482460 FAM135BQ49AJ0 1406 aa33.92■■■■□ 3.02
CYTH3-208ENST00000482460 NCOA3Q9Y6Q9 1424 aa33.92■■■■□ 3.02
CYTH3-208ENST00000482460 ACIN1Q9UKV3 1341 aaKnown RBP33.91■■■■□ 3.02
CYTH3-208ENST00000482460 FOXD1Q16676 465 aa33.9■■■■□ 3.02
CYTH3-208ENST00000482460 MPHOSPH9Q99550 1183 aa33.9■■■■□ 3.02
CYTH3-208ENST00000482460 AMOTL2Q9Y2J4 779 aa33.9■■■■□ 3.02
CYTH3-208ENST00000482460 PTPRUQ92729 1446 aa33.88■■■■□ 3.01
CYTH3-208ENST00000482460 SETD5Q9C0A6 1442 aa33.87■■■■□ 3.01
CYTH3-208ENST00000482460 RPGRIP1LQ68CZ1 1315 aa33.85■■■■□ 3.01
CYTH3-208ENST00000482460 VGFO15240 615 aaPredicted RBP33.85■■■■□ 3.01
CYTH3-208ENST00000482460 SLAIN2Q9P270 581 aa33.83■■■■□ 3.01
CYTH3-208ENST00000482460 ILDR2Q71H61 639 aa33.82■■■■□ 3
CYTH3-208ENST00000482460 C14orf37Q86TY3 774 aa33.82■■■■□ 3
CYTH3-208ENST00000482460 METP08581 1390 aa33.82■■■■□ 3
CYTH3-208ENST00000482460 ROBO1Q9Y6N7 1651 aa33.8■■■■□ 3
CYTH3-208ENST00000482460 C19orf44Q9H6X5 657 aa33.8■■■■□ 3
CYTH3-208ENST00000482460 MED1Q15648 1581 aaPredicted RBP33.79■■■■□ 3
CYTH3-208ENST00000482460 XRN1Q8IZH2 1706 aaKnown RBP33.79■■■■□ 3
CYTH3-208ENST00000482460 CCDC144AA2RUR9 1427 aa33.79■■■■□ 3
CYTH3-208ENST00000482460 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.75■■■□□ 2.99
CYTH3-208ENST00000482460 PPLO60437 1756 aa33.75■■■□□ 2.99
CYTH3-208ENST00000482460 CADPS2Q86UW7 1296 aa33.74■■■□□ 2.99
CYTH3-208ENST00000482460 RAB3GAP2Q9H2M9 1393 aa33.73■■■□□ 2.99
CYTH3-208ENST00000482460 ATF3P18847 181 aa33.72■■■□□ 2.99
CYTH3-208ENST00000482460 RGL3Q3MIN7 710 aa33.68■■■□□ 2.98
CYTH3-208ENST00000482460 SPATA31E1Q6ZUB1 1445 aa33.68■■■□□ 2.98
CYTH3-208ENST00000482460 SETD1AO15047 1707 aaKnown RBP33.67■■■□□ 2.98
CYTH3-208ENST00000482460 DCCP43146 1447 aa33.64■■■□□ 2.98
CYTH3-208ENST00000482460 ANKRD30BQ9BXX2 1392 aa33.61■■■□□ 2.97
CYTH3-208ENST00000482460 PHLPP1O60346 1717 aa33.61■■■□□ 2.97
CYTH3-208ENST00000482460 ADGRF5Q8IZF2 1346 aa33.6■■■□□ 2.97
CYTH3-208ENST00000482460 PHF23Q9BUL5 403 aaPredicted RBP33.59■■■□□ 2.97
CYTH3-208ENST00000482460 HRCP23327 699 aa33.58■■■□□ 2.97
CYTH3-208ENST00000482460 IFT172Q9UG01 1749 aa33.58■■■□□ 2.97
CYTH3-208ENST00000482460 PTCH1Q13635 1447 aa33.57■■■□□ 2.96
CYTH3-208ENST00000482460 ADGRL3Q9HAR2 1447 aa33.57■■■□□ 2.96
CYTH3-208ENST00000482460 SOCS7O14512 581 aa33.55■■■□□ 2.96
CYTH3-208ENST00000482460 PRAG1Q86YV5 1406 aa33.54■■■□□ 2.96
CYTH3-208ENST00000482460 ROBO2Q9HCK4 1378 aa33.53■■■□□ 2.96
CYTH3-208ENST00000482460 BRINP3Q76B58 766 aa33.53■■■□□ 2.96
CYTH3-208ENST00000482460 NALCNQ8IZF0 1738 aa33.52■■■□□ 2.96
CYTH3-208ENST00000482460 MST1RQ04912 1400 aa33.52■■■□□ 2.96
CYTH3-208ENST00000482460 COL16A1Q07092 1604 aaPredicted RBP33.5■■■□□ 2.95
CYTH3-208ENST00000482460 JCADQ9P266 1359 aa33.5■■■□□ 2.95
CYTH3-208ENST00000482460 AHDC1Q5TGY3 1603 aaPredicted RBP33.5■■■□□ 2.95
CYTH3-208ENST00000482460 PIK3C2GO75747 1445 aa33.46■■■□□ 2.95
CYTH3-208ENST00000482460 ASXL1Q8IXJ9 1541 aa33.43■■■□□ 2.94
CYTH3-208ENST00000482460 LRPPRCP42704 1394 aaKnown RBP33.4■■■□□ 2.94
CYTH3-208ENST00000482460 RGS17Q9UGC6 210 aaPredicted RBP33.4■■■□□ 2.94
CYTH3-208ENST00000482460 TMEM132EQ6IEE7 984 aa33.39■■■□□ 2.94
CYTH3-208ENST00000482460 STK26Q9P289 416 aa33.39■■■□□ 2.94
CYTH3-208ENST00000482460 MYOM2P54296 1465 aa33.38■■■□□ 2.93
CYTH3-208ENST00000482460 TECPR2O15040 1411 aa33.38■■■□□ 2.93
CYTH3-208ENST00000482460 ABCC11Q96J66 1382 aa33.38■■■□□ 2.93
CYTH3-208ENST00000482460 C14orf93Q9H972 538 aaKnown RBP33.38■■■□□ 2.93
CYTH3-208ENST00000482460 C1orf167Q5SNV9 1468 aa33.37■■■□□ 2.93
CYTH3-208ENST00000482460 NRXN1Q9ULB1 1477 aa33.37■■■□□ 2.93
CYTH3-208ENST00000482460 NHSL1Q5SYE7 1610 aa33.35■■■□□ 2.93
CYTH3-208ENST00000482460 SPATA31A6Q5VVP1 1343 aa33.35■■■□□ 2.93
CYTH3-208ENST00000482460 KNDC1Q76NI1 1749 aa33.33■■■□□ 2.93
CYTH3-208ENST00000482460 SHPRHQ149N8 1683 aa33.33■■■□□ 2.93
CYTH3-208ENST00000482460 WAPLQ7Z5K2 1190 aa33.32■■■□□ 2.92
CYTH3-208ENST00000482460 YTHDC2Q9H6S0 1430 aaKnown RBP33.32■■■□□ 2.92
CYTH3-208ENST00000482460 CFAP70Q5T0N1 1121 aa33.31■■■□□ 2.92
CYTH3-208ENST00000482460 LAMC1P11047 1609 aa33.29■■■□□ 2.92
CYTH3-208ENST00000482460 LRRC59Q96AG4 307 aaKnown RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms