RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
CTNNB1-213ENST00000482042 NPDC1Q9NQX5 325 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-213ENST00000482042 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
CTNNB1-213ENST00000482042 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
CTNNB1-213ENST00000482042 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
CTNNB1-213ENST00000482042 SOGA1O94964 1423 aa11.34□□□□□ -0.59
CTNNB1-213ENST00000482042 FAM98CQ17RN3 349 aaKnown RBP11.34□□□□□ -0.59
CTNNB1-213ENST00000482042 ANKK1Q8NFD2 765 aa11.34□□□□□ -0.59
CTNNB1-213ENST00000482042 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
CTNNB1-213ENST00000482042 ZFRQ96KR1 1074 aaKnown RBP11.33□□□□□ -0.6
CTNNB1-213ENST00000482042 TTC13Q8NBP0 860 aa11.32□□□□□ -0.6
CTNNB1-213ENST00000482042 ABCA10Q8WWZ4 1543 aa11.32□□□□□ -0.6
CTNNB1-213ENST00000482042 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
CTNNB1-213ENST00000482042 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
CTNNB1-213ENST00000482042 PTPN5P54829 565 aa11.3□□□□□ -0.6
CTNNB1-213ENST00000482042 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
CTNNB1-213ENST00000482042 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
CTNNB1-213ENST00000482042 C3orf80F5H4A9 247 aa11.28□□□□□ -0.6
CTNNB1-213ENST00000482042 PTGDRQ13258 359 aa11.28□□□□□ -0.6
CTNNB1-213ENST00000482042 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
CTNNB1-213ENST00000482042 TATDN2Q93075 761 aa11.28□□□□□ -0.6
CTNNB1-213ENST00000482042 BCAMP50895 628 aa11.27□□□□□ -0.61
CTNNB1-213ENST00000482042 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
CTNNB1-213ENST00000482042 SMAPO00193 183 aa11.26□□□□□ -0.61
CTNNB1-213ENST00000482042 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
CTNNB1-213ENST00000482042 SMYD5Q6GMV2 418 aa11.25□□□□□ -0.61
CTNNB1-213ENST00000482042 CHD1O14646 1710 aa11.24□□□□□ -0.61
CTNNB1-213ENST00000482042 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
CTNNB1-213ENST00000482042 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
CTNNB1-213ENST00000482042 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
CTNNB1-213ENST00000482042 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
CTNNB1-213ENST00000482042 CUL7Q14999 1698 aa11.24□□□□□ -0.61
CTNNB1-213ENST00000482042 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
CTNNB1-213ENST00000482042 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
CTNNB1-213ENST00000482042 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
CTNNB1-213ENST00000482042 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
CTNNB1-213ENST00000482042 FCHSD2O94868 740 aa11.21□□□□□ -0.61
CTNNB1-213ENST00000482042 NYAP1Q6ZVC0 841 aa11.21□□□□□ -0.61
CTNNB1-213ENST00000482042 KIF27Q86VH2 1401 aa11.21□□□□□ -0.62
CTNNB1-213ENST00000482042 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.623e-14■■■■■ 27.2
CTNNB1-213ENST00000482042 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.62
CTNNB1-213ENST00000482042 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
CTNNB1-213ENST00000482042 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
CTNNB1-213ENST00000482042 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
CTNNB1-213ENST00000482042 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
CTNNB1-213ENST00000482042 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
CTNNB1-213ENST00000482042 EYA1Q99502 592 aa11.18□□□□□ -0.62
CTNNB1-213ENST00000482042 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
CTNNB1-213ENST00000482042 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
CTNNB1-213ENST00000482042 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
CTNNB1-213ENST00000482042 GPR37O15354 613 aa11.16□□□□□ -0.62
CTNNB1-213ENST00000482042 HIC1Q14526 733 aa11.16□□□□□ -0.62
CTNNB1-213ENST00000482042 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
CTNNB1-213ENST00000482042 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
CTNNB1-213ENST00000482042 EEA1Q15075 1411 aa11.15□□□□□ -0.62
CTNNB1-213ENST00000482042 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
CTNNB1-213ENST00000482042 ITGBL1O95965 494 aaPredicted RBP11.13□□□□□ -0.63
CTNNB1-213ENST00000482042 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
CTNNB1-213ENST00000482042 PPP4CP60510 307 aa11.12□□□□□ -0.63
CTNNB1-213ENST00000482042 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
CTNNB1-213ENST00000482042 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
CTNNB1-213ENST00000482042 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
CTNNB1-213ENST00000482042 CTTNBP2Q8WZ74 1663 aa11.1□□□□□ -0.63
CTNNB1-213ENST00000482042 GNPATO15228 680 aa11.1□□□□□ -0.63
CTNNB1-213ENST00000482042 DNAJB2P25686 324 aa11.1□□□□□ -0.63
CTNNB1-213ENST00000482042 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
CTNNB1-213ENST00000482042 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
CTNNB1-213ENST00000482042 GRIN2AQ12879 1464 aa11.08□□□□□ -0.64
CTNNB1-213ENST00000482042 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
CTNNB1-213ENST00000482042 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
CTNNB1-213ENST00000482042 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
CTNNB1-213ENST00000482042 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
CTNNB1-213ENST00000482042 RNF40O75150 1001 aa11.06□□□□□ -0.64
CTNNB1-213ENST00000482042 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
CTNNB1-213ENST00000482042 IGF1RP08069 1367 aa11.06□□□□□ -0.64
CTNNB1-213ENST00000482042 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
CTNNB1-213ENST00000482042 RCCD1A6NED2 376 aa11.05□□□□□ -0.64
CTNNB1-213ENST00000482042 OATP04181 439 aa11.05□□□□□ -0.64
CTNNB1-213ENST00000482042 FECHP22830 423 aa11.05□□□□□ -0.64
CTNNB1-213ENST00000482042 PXYLP1Q8TE99 480 aa11.05□□□□□ -0.64
CTNNB1-213ENST00000482042 KIF21BO75037 1637 aa11.05□□□□□ -0.64
CTNNB1-213ENST00000482042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
CTNNB1-213ENST00000482042 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
CTNNB1-213ENST00000482042 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
CTNNB1-213ENST00000482042 RAPGEF2Q9Y4G8 1499 aa11.04□□□□□ -0.64
CTNNB1-213ENST00000482042 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
CTNNB1-213ENST00000482042 A0A0G2JS52 829 aa11.03□□□□□ -0.64
CTNNB1-213ENST00000482042 CLASP1Q7Z460 1538 aa11.02□□□□□ -0.64
CTNNB1-213ENST00000482042 CEP170Q5SW79 1584 aa11.02□□□□□ -0.65
CTNNB1-213ENST00000482042 APLP1P51693 650 aa11.02□□□□□ -0.65
CTNNB1-213ENST00000482042 KCNC4Q03721 635 aa11.02□□□□□ -0.65
CTNNB1-213ENST00000482042 NUP160Q12769 1436 aa11□□□□□ -0.65
CTNNB1-213ENST00000482042 PRXQ9BXM0 1461 aa11□□□□□ -0.65
CTNNB1-213ENST00000482042 SHROOM2Q13796 1616 aa10.99□□□□□ -0.65
CTNNB1-213ENST00000482042 TJAP1Q5JTD0 557 aa10.99□□□□□ -0.65
CTNNB1-213ENST00000482042 IQGAP2Q13576 1575 aa10.97□□□□□ -0.65
CTNNB1-213ENST00000482042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
CTNNB1-213ENST00000482042 MTRQ99707 1265 aa10.97□□□□□ -0.65
CTNNB1-213ENST00000482042 PRR14Q9BWN1 585 aa10.97□□□□□ -0.65
CTNNB1-213ENST00000482042 KIAA0586Q9BVV6 1533 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms