RNA–Protein interactions for RNA: ENST00000481220.5

SNHG12-208, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 3

Gene SNHG12, Length 751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-208ENST00000481220 TOM1O60784 492 aa27.45■■□□□ 1.98
SNHG12-208ENST00000481220 CHGAP10645 457 aaKnown RBP27.45■■□□□ 1.98
SNHG12-208ENST00000481220 HDGFP51858 240 aaKnown RBP27.45■■□□□ 1.98
SNHG12-208ENST00000481220 KCNA6P17658 529 aa27.44■■□□□ 1.98
SNHG12-208ENST00000481220 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.43■■□□□ 1.982e-10■■■■□ 20.6
SNHG12-208ENST00000481220 TRIM52Q96A61 297 aa27.4■■□□□ 1.98
SNHG12-208ENST00000481220 PPP1R15AO75807 674 aaPredicted RBP27.39■■□□□ 1.98
SNHG12-208ENST00000481220 TRPM2O94759 1503 aa27.39■■□□□ 1.98
SNHG12-208ENST00000481220 XIRP1Q702N8 1843 aaKnown RBP27.39■■□□□ 1.97
SNHG12-208ENST00000481220 NUTM2DQ5VT03 806 aaPredicted RBP27.38■■□□□ 1.97
SNHG12-208ENST00000481220 NWD1Q149M9 1564 aa27.38■■□□□ 1.97
SNHG12-208ENST00000481220 PIP4K2BP78356 416 aa27.37■■□□□ 1.97
SNHG12-208ENST00000481220 ADAMTS13Q76LX8 1427 aa27.37■■□□□ 1.97
SNHG12-208ENST00000481220 BCANQ96GW7 911 aa27.37■■□□□ 1.97
SNHG12-208ENST00000481220 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
SNHG12-208ENST00000481220 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
SNHG12-208ENST00000481220 CLTCL1P53675 1640 aa27.36■■□□□ 1.97
SNHG12-208ENST00000481220 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
SNHG12-208ENST00000481220 TMEM94Q12767 1356 aa27.34■■□□□ 1.97
SNHG12-208ENST00000481220 NKTRP30414 1462 aaKnown RBP27.32■■□□□ 1.96
SNHG12-208ENST00000481220 HSPA1LP34931 641 aa27.31■■□□□ 1.96
SNHG12-208ENST00000481220 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
SNHG12-208ENST00000481220 CHD2O14647 1828 aaKnown RBP27.3■■□□□ 1.96
SNHG12-208ENST00000481220 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
SNHG12-208ENST00000481220 DIP2AQ14689 1571 aa27.29■■□□□ 1.96
SNHG12-208ENST00000481220 RBM33Q96EV2 1170 aaKnown RBP27.27■■□□□ 1.96
SNHG12-208ENST00000481220 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
SNHG12-208ENST00000481220 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.95
SNHG12-208ENST00000481220 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
SNHG12-208ENST00000481220 NRXN3Q9Y4C0 1643 aa27.25■■□□□ 1.95
SNHG12-208ENST00000481220 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
SNHG12-208ENST00000481220 FOXD1Q16676 465 aa27.24■■□□□ 1.95
SNHG12-208ENST00000481220 MPHOSPH9Q99550 1183 aa27.23■■□□□ 1.95
SNHG12-208ENST00000481220 SETD5Q9C0A6 1442 aa27.23■■□□□ 1.95
SNHG12-208ENST00000481220 KIF1BO60333 1816 aa27.21■■□□□ 1.95
SNHG12-208ENST00000481220 PTPRUQ92729 1446 aa27.21■■□□□ 1.95
SNHG12-208ENST00000481220 NCOA3Q9Y6Q9 1424 aa27.17■■□□□ 1.94
SNHG12-208ENST00000481220 DISP3Q9P2K9 1392 aa27.17■■□□□ 1.94
SNHG12-208ENST00000481220 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
SNHG12-208ENST00000481220 FAM135BQ49AJ0 1406 aa27.16■■□□□ 1.94
SNHG12-208ENST00000481220 AMOTL2Q9Y2J4 779 aa27.16■■□□□ 1.94
SNHG12-208ENST00000481220 METP08581 1390 aa27.15■■□□□ 1.94
SNHG12-208ENST00000481220 RPGRIP1LQ68CZ1 1315 aa27.15■■□□□ 1.94
SNHG12-208ENST00000481220 MSH6P52701 1360 aa27.14■■□□□ 1.94
SNHG12-208ENST00000481220 RAB3GAP2Q9H2M9 1393 aa27.13■■□□□ 1.93
SNHG12-208ENST00000481220 XRN1Q8IZH2 1706 aaKnown RBP27.11■■□□□ 1.93
SNHG12-208ENST00000481220 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
SNHG12-208ENST00000481220 CCDC144AA2RUR9 1427 aa27.1■■□□□ 1.93
SNHG12-208ENST00000481220 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
SNHG12-208ENST00000481220 SLAIN2Q9P270 581 aa27.08■■□□□ 1.93
SNHG12-208ENST00000481220 PPLO60437 1756 aa27.07■■□□□ 1.92
SNHG12-208ENST00000481220 C19orf44Q9H6X5 657 aa27.06■■□□□ 1.92
SNHG12-208ENST00000481220 ROBO1Q9Y6N7 1651 aa27.05■■□□□ 1.92
SNHG12-208ENST00000481220 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
SNHG12-208ENST00000481220 ILDR2Q71H61 639 aa27.03■■□□□ 1.92
SNHG12-208ENST00000481220 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
SNHG12-208ENST00000481220 HRCP23327 699 aa27.01■■□□□ 1.91
SNHG12-208ENST00000481220 C14orf37Q86TY3 774 aa27.01■■□□□ 1.91
SNHG12-208ENST00000481220 MED1Q15648 1581 aaPredicted RBP27.01■■□□□ 1.91
SNHG12-208ENST00000481220 ADGRF5Q8IZF2 1346 aa26.99■■□□□ 1.91
SNHG12-208ENST00000481220 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
SNHG12-208ENST00000481220 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
SNHG12-208ENST00000481220 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
SNHG12-208ENST00000481220 DCCP43146 1447 aa26.97■■□□□ 1.91
SNHG12-208ENST00000481220 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
SNHG12-208ENST00000481220 ANKRD30BQ9BXX2 1392 aa26.96■■□□□ 1.91
SNHG12-208ENST00000481220 ATF3P18847 181 aa26.95■■□□□ 1.9
SNHG12-208ENST00000481220 PTCH1Q13635 1447 aa26.94■■□□□ 1.9
SNHG12-208ENST00000481220 ROBO2Q9HCK4 1378 aa26.93■■□□□ 1.9
SNHG12-208ENST00000481220 ADGRL3Q9HAR2 1447 aa26.91■■□□□ 1.9
SNHG12-208ENST00000481220 PIK3C2GO75747 1445 aa26.9■■□□□ 1.9
SNHG12-208ENST00000481220 MST1RQ04912 1400 aa26.88■■□□□ 1.89
SNHG12-208ENST00000481220 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
SNHG12-208ENST00000481220 BRINP3Q76B58 766 aa26.86■■□□□ 1.89
SNHG12-208ENST00000481220 NRXN1Q9ULB1 1477 aa26.86■■□□□ 1.89
SNHG12-208ENST00000481220 PHLPP1O60346 1717 aa26.85■■□□□ 1.89
SNHG12-208ENST00000481220 COL16A1Q07092 1604 aaPredicted RBP26.84■■□□□ 1.89
SNHG12-208ENST00000481220 ASXL1Q8IXJ9 1541 aa26.84■■□□□ 1.89
SNHG12-208ENST00000481220 AHDC1Q5TGY3 1603 aaPredicted RBP26.83■■□□□ 1.89
SNHG12-208ENST00000481220 MYOM2P54296 1465 aa26.82■■□□□ 1.88
SNHG12-208ENST00000481220 TECPR2O15040 1411 aa26.82■■□□□ 1.88
SNHG12-208ENST00000481220 C14orf93Q9H972 538 aaKnown RBP26.8■■□□□ 1.88
SNHG12-208ENST00000481220 LRPPRCP42704 1394 aaKnown RBP26.8■■□□□ 1.88
SNHG12-208ENST00000481220 TMEM132EQ6IEE7 984 aa26.79■■□□□ 1.88
SNHG12-208ENST00000481220 ABCC11Q96J66 1382 aa26.79■■□□□ 1.88
SNHG12-208ENST00000481220 JCADQ9P266 1359 aa26.79■■□□□ 1.88
SNHG12-208ENST00000481220 RGS17Q9UGC6 210 aaPredicted RBP26.76■■□□□ 1.87
SNHG12-208ENST00000481220 C1orf167Q5SNV9 1468 aa26.75■■□□□ 1.87
SNHG12-208ENST00000481220 SOCS7O14512 581 aa26.75■■□□□ 1.87
SNHG12-208ENST00000481220 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
SNHG12-208ENST00000481220 STK26Q9P289 416 aa26.75■■□□□ 1.87
SNHG12-208ENST00000481220 CFAP70Q5T0N1 1121 aa26.74■■□□□ 1.87
SNHG12-208ENST00000481220 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
SNHG12-208ENST00000481220 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
SNHG12-208ENST00000481220 KNDC1Q76NI1 1749 aa26.72■■□□□ 1.87
SNHG12-208ENST00000481220 NHSL1Q5SYE7 1610 aa26.72■■□□□ 1.87
SNHG12-208ENST00000481220 PLEKHH1Q9ULM0 1364 aa26.71■■□□□ 1.87
SNHG12-208ENST00000481220 SIRT1Q96EB6 747 aa26.7■■□□□ 1.86
SNHG12-208ENST00000481220 DHX57Q6P158 1386 aaKnown RBP26.7■■□□□ 1.86
SNHG12-208ENST00000481220 LAMC1P11047 1609 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms