RNA–Protein interactions for RNA: ENST00000478855.3

RN7SL709P-201, Transcript of RNA, 7SL, cytoplasmic 709, pseudogene, humanhuman

BASIC

Gene RN7SL709P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL709P-201ENST00000478855 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
RN7SL709P-201ENST00000478855 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
RN7SL709P-201ENST00000478855 SLC26A8Q96RN1 970 aa17.23■□□□□ 0.35
RN7SL709P-201ENST00000478855 KIF1BO60333 1816 aa17.23■□□□□ 0.35
RN7SL709P-201ENST00000478855 CHD2O14647 1828 aaKnown RBP17.22■□□□□ 0.35
RN7SL709P-201ENST00000478855 TOM1O60784 492 aa17.22■□□□□ 0.35
RN7SL709P-201ENST00000478855 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
RN7SL709P-201ENST00000478855 TRPM2O94759 1503 aa17.21■□□□□ 0.34
RN7SL709P-201ENST00000478855 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
RN7SL709P-201ENST00000478855 KCNA6P17658 529 aa17.2■□□□□ 0.34
RN7SL709P-201ENST00000478855 BCANQ96GW7 911 aa17.2■□□□□ 0.34
RN7SL709P-201ENST00000478855 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
RN7SL709P-201ENST00000478855 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
RN7SL709P-201ENST00000478855 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
RN7SL709P-201ENST00000478855 NWD1Q149M9 1564 aa17.18■□□□□ 0.34
RN7SL709P-201ENST00000478855 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
RN7SL709P-201ENST00000478855 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
RN7SL709P-201ENST00000478855 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
RN7SL709P-201ENST00000478855 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
RN7SL709P-201ENST00000478855 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
RN7SL709P-201ENST00000478855 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
RN7SL709P-201ENST00000478855 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
RN7SL709P-201ENST00000478855 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
RN7SL709P-201ENST00000478855 NKTRP30414 1462 aaKnown RBP17.13■□□□□ 0.33
RN7SL709P-201ENST00000478855 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
RN7SL709P-201ENST00000478855 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
RN7SL709P-201ENST00000478855 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
RN7SL709P-201ENST00000478855 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
RN7SL709P-201ENST00000478855 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
RN7SL709P-201ENST00000478855 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
RN7SL709P-201ENST00000478855 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
RN7SL709P-201ENST00000478855 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
RN7SL709P-201ENST00000478855 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
RN7SL709P-201ENST00000478855 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
RN7SL709P-201ENST00000478855 HSPA1LP34931 641 aa17.08■□□□□ 0.32
RN7SL709P-201ENST00000478855 FOXD1Q16676 465 aa17.08■□□□□ 0.32
RN7SL709P-201ENST00000478855 PPLO60437 1756 aa17.07■□□□□ 0.32
RN7SL709P-201ENST00000478855 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
RN7SL709P-201ENST00000478855 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
RN7SL709P-201ENST00000478855 ILDR2Q71H61 639 aa17.05■□□□□ 0.32
RN7SL709P-201ENST00000478855 NCOA3Q9Y6Q9 1424 aa17.04■□□□□ 0.32
RN7SL709P-201ENST00000478855 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
RN7SL709P-201ENST00000478855 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
RN7SL709P-201ENST00000478855 RAB3GAP2Q9H2M9 1393 aa17.03■□□□□ 0.32
RN7SL709P-201ENST00000478855 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
RN7SL709P-201ENST00000478855 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
RN7SL709P-201ENST00000478855 XRN1Q8IZH2 1706 aaKnown RBP17.03■□□□□ 0.32
RN7SL709P-201ENST00000478855 MSH6P52701 1360 aa17.02■□□□□ 0.32
RN7SL709P-201ENST00000478855 CCDC144AA2RUR9 1427 aa17.02■□□□□ 0.31
RN7SL709P-201ENST00000478855 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
RN7SL709P-201ENST00000478855 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
RN7SL709P-201ENST00000478855 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
RN7SL709P-201ENST00000478855 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
RN7SL709P-201ENST00000478855 ROBO1Q9Y6N7 1651 aa17■□□□□ 0.31
RN7SL709P-201ENST00000478855 METP08581 1390 aa17■□□□□ 0.31
RN7SL709P-201ENST00000478855 HRCP23327 699 aa16.99■□□□□ 0.31
RN7SL709P-201ENST00000478855 SPATA31E1Q6ZUB1 1445 aa16.98■□□□□ 0.31
RN7SL709P-201ENST00000478855 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
RN7SL709P-201ENST00000478855 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
RN7SL709P-201ENST00000478855 C14orf37Q86TY3 774 aa16.96■□□□□ 0.31
RN7SL709P-201ENST00000478855 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
RN7SL709P-201ENST00000478855 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
RN7SL709P-201ENST00000478855 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
RN7SL709P-201ENST00000478855 SOCS7O14512 581 aa16.92■□□□□ 0.3
RN7SL709P-201ENST00000478855 ATF3P18847 181 aa16.92■□□□□ 0.3
RN7SL709P-201ENST00000478855 PHLPP1O60346 1717 aa16.91■□□□□ 0.3
RN7SL709P-201ENST00000478855 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
RN7SL709P-201ENST00000478855 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
RN7SL709P-201ENST00000478855 DCCP43146 1447 aa16.9■□□□□ 0.3
RN7SL709P-201ENST00000478855 PRAG1Q86YV5 1406 aa16.89■□□□□ 0.29
RN7SL709P-201ENST00000478855 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
RN7SL709P-201ENST00000478855 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
RN7SL709P-201ENST00000478855 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
RN7SL709P-201ENST00000478855 PIK3C2GO75747 1445 aa16.86■□□□□ 0.29
RN7SL709P-201ENST00000478855 MST1RQ04912 1400 aa16.84■□□□□ 0.29
RN7SL709P-201ENST00000478855 MYOM2P54296 1465 aa16.84■□□□□ 0.29
RN7SL709P-201ENST00000478855 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
RN7SL709P-201ENST00000478855 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
RN7SL709P-201ENST00000478855 AHDC1Q5TGY3 1603 aaPredicted RBP16.84■□□□□ 0.29
RN7SL709P-201ENST00000478855 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
RN7SL709P-201ENST00000478855 LAMC1P11047 1609 aa16.83■□□□□ 0.28
RN7SL709P-201ENST00000478855 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
RN7SL709P-201ENST00000478855 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
RN7SL709P-201ENST00000478855 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
RN7SL709P-201ENST00000478855 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
RN7SL709P-201ENST00000478855 NHSL1Q5SYE7 1610 aa16.81■□□□□ 0.28
RN7SL709P-201ENST00000478855 TECPR2O15040 1411 aa16.8■□□□□ 0.28
RN7SL709P-201ENST00000478855 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
RN7SL709P-201ENST00000478855 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
RN7SL709P-201ENST00000478855 JCADQ9P266 1359 aa16.79■□□□□ 0.28
RN7SL709P-201ENST00000478855 STK26Q9P289 416 aa16.79■□□□□ 0.28
RN7SL709P-201ENST00000478855 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
RN7SL709P-201ENST00000478855 SHPRHQ149N8 1683 aa16.78■□□□□ 0.28
RN7SL709P-201ENST00000478855 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
RN7SL709P-201ENST00000478855 CFAP70Q5T0N1 1121 aa16.77■□□□□ 0.28
RN7SL709P-201ENST00000478855 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
RN7SL709P-201ENST00000478855 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
RN7SL709P-201ENST00000478855 C1orf167Q5SNV9 1468 aa16.76■□□□□ 0.27
RN7SL709P-201ENST00000478855 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
RN7SL709P-201ENST00000478855 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms