RNA–Protein interactions for RNA: ENST00000477905.1

LRRC42-205, Transcript of leucine rich repeat containing 42, humanhuman

TSL 2

Gene LRRC42, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-205ENST00000477905 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
LRRC42-205ENST00000477905 MYO5BQ9ULV0 1848 aa20.33■□□□□ 0.85
LRRC42-205ENST00000477905 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
LRRC42-205ENST00000477905 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
LRRC42-205ENST00000477905 PIK3R4Q99570 1358 aa20.31■□□□□ 0.84
LRRC42-205ENST00000477905 NCOA3Q9Y6Q9 1424 aa20.3■□□□□ 0.84
LRRC42-205ENST00000477905 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
LRRC42-205ENST00000477905 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
LRRC42-205ENST00000477905 ADAMTS13Q76LX8 1427 aa20.29■□□□□ 0.84
LRRC42-205ENST00000477905 HSPA1LP34931 641 aa20.29■□□□□ 0.84
LRRC42-205ENST00000477905 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
LRRC42-205ENST00000477905 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
LRRC42-205ENST00000477905 SPHKAPQ2M3C7 1700 aa20.28■□□□□ 0.84
LRRC42-205ENST00000477905 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
LRRC42-205ENST00000477905 DISP3Q9P2K9 1392 aa20.27■□□□□ 0.84
LRRC42-205ENST00000477905 ITGAEP38570 1179 aa20.27■□□□□ 0.84
LRRC42-205ENST00000477905 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
LRRC42-205ENST00000477905 TRPM2O94759 1503 aa20.25■□□□□ 0.83
LRRC42-205ENST00000477905 PIP4K2BP78356 416 aa20.23■□□□□ 0.83
LRRC42-205ENST00000477905 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
LRRC42-205ENST00000477905 ILDR2Q71H61 639 aa20.2■□□□□ 0.82
LRRC42-205ENST00000477905 PROSER2Q86WR7 435 aaPredicted RBP20.19■□□□□ 0.82
LRRC42-205ENST00000477905 NRXN3Q9Y4C0 1643 aa20.19■□□□□ 0.82
LRRC42-205ENST00000477905 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
LRRC42-205ENST00000477905 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
LRRC42-205ENST00000477905 MED1Q15648 1581 aaPredicted RBP20.17■□□□□ 0.82
LRRC42-205ENST00000477905 NEXMIFQ5QGS0 1516 aa20.16■□□□□ 0.82
LRRC42-205ENST00000477905 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
LRRC42-205ENST00000477905 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
LRRC42-205ENST00000477905 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
LRRC42-205ENST00000477905 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
LRRC42-205ENST00000477905 MSH6P52701 1360 aa20.13■□□□□ 0.81
LRRC42-205ENST00000477905 CHGAP10645 457 aaKnown RBP20.13■□□□□ 0.81
LRRC42-205ENST00000477905 XRN1Q8IZH2 1706 aaKnown RBP20.13■□□□□ 0.81
LRRC42-205ENST00000477905 SOCS7O14512 581 aa20.11■□□□□ 0.81
LRRC42-205ENST00000477905 DCCP43146 1447 aa20.1■□□□□ 0.81
LRRC42-205ENST00000477905 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
LRRC42-205ENST00000477905 KIF1BO60333 1816 aa20.1■□□□□ 0.81
LRRC42-205ENST00000477905 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
LRRC42-205ENST00000477905 BCANQ96GW7 911 aa20.09■□□□□ 0.81
LRRC42-205ENST00000477905 C19orf44Q9H6X5 657 aa20.09■□□□□ 0.81
LRRC42-205ENST00000477905 SLAIN2Q9P270 581 aa20.09■□□□□ 0.81
LRRC42-205ENST00000477905 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
LRRC42-205ENST00000477905 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
LRRC42-205ENST00000477905 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
LRRC42-205ENST00000477905 METP08581 1390 aa20.06■□□□□ 0.8
LRRC42-205ENST00000477905 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
LRRC42-205ENST00000477905 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
LRRC42-205ENST00000477905 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
LRRC42-205ENST00000477905 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
LRRC42-205ENST00000477905 CADPS2Q86UW7 1296 aa20.04■□□□□ 0.8
LRRC42-205ENST00000477905 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
LRRC42-205ENST00000477905 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.8
LRRC42-205ENST00000477905 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
LRRC42-205ENST00000477905 PTCH1Q13635 1447 aa20.01■□□□□ 0.79
LRRC42-205ENST00000477905 AHDC1Q5TGY3 1603 aaPredicted RBP20■□□□□ 0.79
LRRC42-205ENST00000477905 PPLO60437 1756 aa20■□□□□ 0.79
LRRC42-205ENST00000477905 MPHOSPH9Q99550 1183 aa19.99■□□□□ 0.79
LRRC42-205ENST00000477905 COL16A1Q07092 1604 aaPredicted RBP19.98■□□□□ 0.79
LRRC42-205ENST00000477905 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
LRRC42-205ENST00000477905 ADGRL3Q9HAR2 1447 aa19.97■□□□□ 0.79
LRRC42-205ENST00000477905 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
LRRC42-205ENST00000477905 MST1RQ04912 1400 aa19.95■□□□□ 0.78
LRRC42-205ENST00000477905 ATF3P18847 181 aa19.95■□□□□ 0.78
LRRC42-205ENST00000477905 RGS17Q9UGC6 210 aaPredicted RBP19.95■□□□□ 0.78
LRRC42-205ENST00000477905 JCADQ9P266 1359 aa19.95■□□□□ 0.78
LRRC42-205ENST00000477905 HRCP23327 699 aa19.94■□□□□ 0.78
LRRC42-205ENST00000477905 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
LRRC42-205ENST00000477905 ANKRD30BQ9BXX2 1392 aa19.94■□□□□ 0.78
LRRC42-205ENST00000477905 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
LRRC42-205ENST00000477905 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
LRRC42-205ENST00000477905 TECPR2O15040 1411 aa19.92■□□□□ 0.78
LRRC42-205ENST00000477905 BRINP3Q76B58 766 aa19.91■□□□□ 0.78
LRRC42-205ENST00000477905 LAMC1P11047 1609 aa19.91■□□□□ 0.78
LRRC42-205ENST00000477905 ROBO2Q9HCK4 1378 aa19.9■□□□□ 0.78
LRRC42-205ENST00000477905 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
LRRC42-205ENST00000477905 FOXD1Q16676 465 aa19.89■□□□□ 0.77
LRRC42-205ENST00000477905 SPATA31A6Q5VVP1 1343 aa19.89■□□□□ 0.77
LRRC42-205ENST00000477905 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.77
LRRC42-205ENST00000477905 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
LRRC42-205ENST00000477905 NHSL1Q5SYE7 1610 aa19.88■□□□□ 0.77
LRRC42-205ENST00000477905 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
LRRC42-205ENST00000477905 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
LRRC42-205ENST00000477905 C14orf37Q86TY3 774 aa19.88■□□□□ 0.77
LRRC42-205ENST00000477905 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
LRRC42-205ENST00000477905 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
LRRC42-205ENST00000477905 ADGRF5Q8IZF2 1346 aa19.86■□□□□ 0.77
LRRC42-205ENST00000477905 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
LRRC42-205ENST00000477905 SIRT1Q96EB6 747 aa19.84■□□□□ 0.77
LRRC42-205ENST00000477905 MYOM2P54296 1465 aa19.84■□□□□ 0.77
LRRC42-205ENST00000477905 C1orf167Q5SNV9 1468 aa19.84■□□□□ 0.77
LRRC42-205ENST00000477905 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.76
LRRC42-205ENST00000477905 KNDC1Q76NI1 1749 aa19.82■□□□□ 0.76
LRRC42-205ENST00000477905 CDC42BPGQ6DT37 1551 aa19.81■□□□□ 0.76
LRRC42-205ENST00000477905 LRP6O75581 1613 aa19.8■□□□□ 0.76
LRRC42-205ENST00000477905 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
LRRC42-205ENST00000477905 STAC3Q96MF2 364 aa19.78■□□□□ 0.76
LRRC42-205ENST00000477905 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
LRRC42-205ENST00000477905 RGL3Q3MIN7 710 aa19.77■□□□□ 0.76
LRRC42-205ENST00000477905 POTEAQ6S8J7 498 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms