RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 TRPM2O94759 1503 aa18.46■□□□□ 0.55
PRKD3-209ENST00000477132 TRIM52Q96A61 297 aa18.45■□□□□ 0.54
PRKD3-209ENST00000477132 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
PRKD3-209ENST00000477132 CPS1P31327 1500 aa18.43■□□□□ 0.54
PRKD3-209ENST00000477132 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
PRKD3-209ENST00000477132 EID1Q9Y6B2 187 aa18.42■□□□□ 0.54
PRKD3-209ENST00000477132 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
PRKD3-209ENST00000477132 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
PRKD3-209ENST00000477132 KIF1BO60333 1816 aa18.4■□□□□ 0.54
PRKD3-209ENST00000477132 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
PRKD3-209ENST00000477132 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
PRKD3-209ENST00000477132 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
PRKD3-209ENST00000477132 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
PRKD3-209ENST00000477132 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
PRKD3-209ENST00000477132 LRRC7Q96NW7 1537 aa18.35■□□□□ 0.53
PRKD3-209ENST00000477132 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
PRKD3-209ENST00000477132 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
PRKD3-209ENST00000477132 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
PRKD3-209ENST00000477132 SLC26A8Q96RN1 970 aa18.34■□□□□ 0.53
PRKD3-209ENST00000477132 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
PRKD3-209ENST00000477132 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.52
PRKD3-209ENST00000477132 ALKQ9UM73 1620 aa18.32■□□□□ 0.52
PRKD3-209ENST00000477132 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
PRKD3-209ENST00000477132 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
PRKD3-209ENST00000477132 PPP1R15AO75807 674 aaPredicted RBP18.31■□□□□ 0.52
PRKD3-209ENST00000477132 PPLO60437 1756 aa18.3■□□□□ 0.52
PRKD3-209ENST00000477132 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
PRKD3-209ENST00000477132 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
PRKD3-209ENST00000477132 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
PRKD3-209ENST00000477132 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
PRKD3-209ENST00000477132 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.52
PRKD3-209ENST00000477132 BCANQ96GW7 911 aa18.27■□□□□ 0.52
PRKD3-209ENST00000477132 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
PRKD3-209ENST00000477132 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
PRKD3-209ENST00000477132 KCNA6P17658 529 aa18.25■□□□□ 0.51
PRKD3-209ENST00000477132 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
PRKD3-209ENST00000477132 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
PRKD3-209ENST00000477132 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
PRKD3-209ENST00000477132 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
PRKD3-209ENST00000477132 SPATA31E1Q6ZUB1 1445 aa18.23■□□□□ 0.51
PRKD3-209ENST00000477132 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
PRKD3-209ENST00000477132 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
PRKD3-209ENST00000477132 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
PRKD3-209ENST00000477132 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
PRKD3-209ENST00000477132 RBM33Q96EV2 1170 aaKnown RBP18.21■□□□□ 0.51
PRKD3-209ENST00000477132 PIK3R4Q99570 1358 aa18.18■□□□□ 0.5
PRKD3-209ENST00000477132 METP08581 1390 aa18.17■□□□□ 0.5
PRKD3-209ENST00000477132 HRCP23327 699 aa18.17■□□□□ 0.5
PRKD3-209ENST00000477132 TOM1O60784 492 aa18.16■□□□□ 0.5
PRKD3-209ENST00000477132 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
PRKD3-209ENST00000477132 PROSER2Q86WR7 435 aaPredicted RBP18.16■□□□□ 0.5
PRKD3-209ENST00000477132 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
PRKD3-209ENST00000477132 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
PRKD3-209ENST00000477132 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
PRKD3-209ENST00000477132 VGFO15240 615 aaPredicted RBP18.12■□□□□ 0.49
PRKD3-209ENST00000477132 AMOTL2Q9Y2J4 779 aa18.12■□□□□ 0.49
PRKD3-209ENST00000477132 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
PRKD3-209ENST00000477132 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
PRKD3-209ENST00000477132 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
PRKD3-209ENST00000477132 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
PRKD3-209ENST00000477132 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
PRKD3-209ENST00000477132 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
PRKD3-209ENST00000477132 MSH6P52701 1360 aa18.08■□□□□ 0.49
PRKD3-209ENST00000477132 HSPA1LP34931 641 aa18.08■□□□□ 0.48
PRKD3-209ENST00000477132 MYOM2P54296 1465 aa18.07■□□□□ 0.48
PRKD3-209ENST00000477132 NCOA3Q9Y6Q9 1424 aa18.07■□□□□ 0.48
PRKD3-209ENST00000477132 NRXN1Q9ULB1 1477 aa18.07■□□□□ 0.48
PRKD3-209ENST00000477132 PRAG1Q86YV5 1406 aa18.05■□□□□ 0.48
PRKD3-209ENST00000477132 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
PRKD3-209ENST00000477132 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
PRKD3-209ENST00000477132 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
PRKD3-209ENST00000477132 LAMC1P11047 1609 aa18.02■□□□□ 0.48
PRKD3-209ENST00000477132 FAM135BQ49AJ0 1406 aa18.02■□□□□ 0.48
PRKD3-209ENST00000477132 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
PRKD3-209ENST00000477132 ADGRL3Q9HAR2 1447 aa18■□□□□ 0.47
PRKD3-209ENST00000477132 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
PRKD3-209ENST00000477132 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
PRKD3-209ENST00000477132 DCCP43146 1447 aa17.98■□□□□ 0.47
PRKD3-209ENST00000477132 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
PRKD3-209ENST00000477132 TECPR2O15040 1411 aa17.98■□□□□ 0.47
PRKD3-209ENST00000477132 TMEM132EQ6IEE7 984 aa17.97■□□□□ 0.47
PRKD3-209ENST00000477132 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
PRKD3-209ENST00000477132 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
PRKD3-209ENST00000477132 LRPPRCP42704 1394 aaKnown RBP17.96■□□□□ 0.47
PRKD3-209ENST00000477132 MST1RQ04912 1400 aa17.96■□□□□ 0.47
PRKD3-209ENST00000477132 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
PRKD3-209ENST00000477132 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
PRKD3-209ENST00000477132 CADPS2Q86UW7 1296 aa17.95■□□□□ 0.46
PRKD3-209ENST00000477132 C14orf93Q9H972 538 aaKnown RBP17.95■□□□□ 0.46
PRKD3-209ENST00000477132 YTHDC2Q9H6S0 1430 aaKnown RBP17.95■□□□□ 0.46
PRKD3-209ENST00000477132 ADGRB1O14514 1584 aa17.95■□□□□ 0.46
PRKD3-209ENST00000477132 ATF3P18847 181 aa17.94■□□□□ 0.46
PRKD3-209ENST00000477132 MED1Q15648 1581 aaPredicted RBP17.94■□□□□ 0.46
PRKD3-209ENST00000477132 COL16A1Q07092 1604 aaPredicted RBP17.94■□□□□ 0.46
PRKD3-209ENST00000477132 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
PRKD3-209ENST00000477132 STK26Q9P289 416 aa17.93■□□□□ 0.46
PRKD3-209ENST00000477132 ABCC11Q96J66 1382 aa17.92■□□□□ 0.46
PRKD3-209ENST00000477132 PLEKHH1Q9ULM0 1364 aa17.92■□□□□ 0.46
PRKD3-209ENST00000477132 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
PRKD3-209ENST00000477132 CDC42BPGQ6DT37 1551 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms