RNA–Protein interactions for RNA: ENST00000475614.6

CCDC30-208, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,001 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-208ENST00000475614 GRIN2AQ12879 1464 aa10.87□□□□□ -0.67
CCDC30-208ENST00000475614 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
CCDC30-208ENST00000475614 PPP1R3GB7ZBB8 358 aa10.86□□□□□ -0.67
CCDC30-208ENST00000475614 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
CCDC30-208ENST00000475614 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
CCDC30-208ENST00000475614 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
CCDC30-208ENST00000475614 COL9A1P20849 921 aa10.85□□□□□ -0.67
CCDC30-208ENST00000475614 PROX2Q3B8N5 592 aa10.85□□□□□ -0.67
CCDC30-208ENST00000475614 C6orf132Q5T0Z8 1188 aa10.85□□□□□ -0.67
CCDC30-208ENST00000475614 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
CCDC30-208ENST00000475614 NUP160Q12769 1436 aa10.84□□□□□ -0.67
CCDC30-208ENST00000475614 A0A0G2JS52 829 aa10.84□□□□□ -0.67
CCDC30-208ENST00000475614 KIF21BO75037 1637 aa10.84□□□□□ -0.67
CCDC30-208ENST00000475614 CLASP1Q7Z460 1538 aa10.84□□□□□ -0.67
CCDC30-208ENST00000475614 CEP170Q5SW79 1584 aa10.83□□□□□ -0.68
CCDC30-208ENST00000475614 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
CCDC30-208ENST00000475614 MAP3K7O43318 606 aa10.83□□□□□ -0.68
CCDC30-208ENST00000475614 RBM33Q96EV2 1170 aaKnown RBP10.83□□□□□ -0.68
CCDC30-208ENST00000475614 RGS20O76081 388 aa10.82□□□□□ -0.68
CCDC30-208ENST00000475614 CHMP7Q8WUX9 453 aaPredicted RBP10.82□□□□□ -0.68
CCDC30-208ENST00000475614 OSBPP22059 807 aa10.81□□□□□ -0.68
CCDC30-208ENST00000475614 RABGEF1Q9UJ41 708 aa10.81□□□□□ -0.68
CCDC30-208ENST00000475614 CTTNBP2Q8WZ74 1663 aa10.81□□□□□ -0.68
CCDC30-208ENST00000475614 SHROOM2Q13796 1616 aa10.79□□□□□ -0.68
CCDC30-208ENST00000475614 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
CCDC30-208ENST00000475614 BCAMP50895 628 aa10.77□□□□□ -0.69
CCDC30-208ENST00000475614 CERKQ8TCT0 537 aa10.77□□□□□ -0.69
CCDC30-208ENST00000475614 KIAA0586Q9BVV6 1533 aa10.76□□□□□ -0.69
CCDC30-208ENST00000475614 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
CCDC30-208ENST00000475614 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
CCDC30-208ENST00000475614 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
CCDC30-208ENST00000475614 ANKK1Q8NFD2 765 aa10.76□□□□□ -0.69
CCDC30-208ENST00000475614 SEMA3EO15041 775 aa10.75□□□□□ -0.69
CCDC30-208ENST00000475614 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
CCDC30-208ENST00000475614 ITGBL1O95965 494 aaPredicted RBP10.74□□□□□ -0.69
CCDC30-208ENST00000475614 FAM9AQ8IZU1 332 aaPredicted RBP10.74□□□□□ -0.69
CCDC30-208ENST00000475614 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
CCDC30-208ENST00000475614 IQGAP2Q13576 1575 aa10.73□□□□□ -0.69
CCDC30-208ENST00000475614 LAPTM4BQ86VI4 370 aa10.73□□□□□ -0.69
CCDC30-208ENST00000475614 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
CCDC30-208ENST00000475614 SMYD5Q6GMV2 418 aa10.72□□□□□ -0.69
CCDC30-208ENST00000475614 ZFRQ96KR1 1074 aaKnown RBP10.72□□□□□ -0.69
CCDC30-208ENST00000475614 GOLGA3Q08378 1498 aa10.72□□□□□ -0.69
CCDC30-208ENST00000475614 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
CCDC30-208ENST00000475614 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
CCDC30-208ENST00000475614 SEPT9Q9UHD8 586 aaPredicted RBP10.7□□□□□ -0.7
CCDC30-208ENST00000475614 RIMBP3CA6NJZ7 1639 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 RIMBP3BA6NNM3 1639 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 RIMBP3Q9UFD9 1639 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 ARHGEF11O15085 1522 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 UGGT2Q9NYU1 1516 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 WBP1LQ9NX94 342 aa10.69□□□□□ -0.7
CCDC30-208ENST00000475614 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
CCDC30-208ENST00000475614 PRSS12P56730 875 aa10.68□□□□□ -0.7
CCDC30-208ENST00000475614 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
CCDC30-208ENST00000475614 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
CCDC30-208ENST00000475614 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
CCDC30-208ENST00000475614 SAMD9Q5K651 1589 aa10.65□□□□□ -0.7
CCDC30-208ENST00000475614 TSKSQ9UJT2 592 aa10.65□□□□□ -0.7
CCDC30-208ENST00000475614 KIAA0556O60303 1618 aa10.65□□□□□ -0.7
CCDC30-208ENST00000475614 DISP1Q96F81 1524 aa10.64□□□□□ -0.71
CCDC30-208ENST00000475614 NPDC1Q9NQX5 325 aaPredicted RBP10.64□□□□□ -0.71
CCDC30-208ENST00000475614 PRG4Q92954 1404 aaPredicted RBP10.64□□□□□ -0.71
CCDC30-208ENST00000475614 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
CCDC30-208ENST00000475614 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
CCDC30-208ENST00000475614 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
CCDC30-208ENST00000475614 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
CCDC30-208ENST00000475614 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
CCDC30-208ENST00000475614 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
CCDC30-208ENST00000475614 PTGDRQ13258 359 aa10.61□□□□□ -0.71
CCDC30-208ENST00000475614 EFCAB5A4FU69 1503 aa10.61□□□□□ -0.71
CCDC30-208ENST00000475614 CARMIL2Q6F5E8 1435 aa10.6□□□□□ -0.71
CCDC30-208ENST00000475614 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
CCDC30-208ENST00000475614 KCNC4Q03721 635 aa10.6□□□□□ -0.71
CCDC30-208ENST00000475614 TTC13Q8NBP0 860 aa10.6□□□□□ -0.71
CCDC30-208ENST00000475614 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
CCDC30-208ENST00000475614 FCHSD2O94868 740 aa10.59□□□□□ -0.71
CCDC30-208ENST00000475614 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
CCDC30-208ENST00000475614 TSR3Q9UJK0 312 aaKnown RBP10.59□□□□□ -0.71
CCDC30-208ENST00000475614 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
CCDC30-208ENST00000475614 UBTFP17480 764 aaKnown RBP10.58□□□□□ -0.72
CCDC30-208ENST00000475614 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
CCDC30-208ENST00000475614 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
CCDC30-208ENST00000475614 TATDN2Q93075 761 aa10.57□□□□□ -0.72
CCDC30-208ENST00000475614 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
CCDC30-208ENST00000475614 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
CCDC30-208ENST00000475614 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
CCDC30-208ENST00000475614 HIC1Q14526 733 aa10.54□□□□□ -0.72
CCDC30-208ENST00000475614 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
CCDC30-208ENST00000475614 LOC105371045A0A1W2PR82 267 aa10.53□□□□□ -0.72
CCDC30-208ENST00000475614 SMAPO00193 183 aa10.53□□□□□ -0.72
CCDC30-208ENST00000475614 ABCA8O94911 1581 aa10.52□□□□□ -0.72
CCDC30-208ENST00000475614 PTPRGP23470 1445 aa10.52□□□□□ -0.73
CCDC30-208ENST00000475614 ADCY10Q96PN6 1610 aa10.52□□□□□ -0.73
CCDC30-208ENST00000475614 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
CCDC30-208ENST00000475614 UHRF1BP1LA0JNW5 1464 aa10.51□□□□□ -0.73
CCDC30-208ENST00000475614 Q6ZNB5 142 aa10.51□□□□□ -0.73
CCDC30-208ENST00000475614 CLIP1P30622 1438 aa10.5□□□□□ -0.73
CCDC30-208ENST00000475614 FHOD3Q2V2M9 1422 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms