RNA–Protein interactions for RNA: ENST00000475614.6

CCDC30-208, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,001 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-208ENST00000475614 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
CCDC30-208ENST00000475614 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
CCDC30-208ENST00000475614 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
CCDC30-208ENST00000475614 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
CCDC30-208ENST00000475614 FOXD1Q16676 465 aa21.61■■□□□ 1.05
CCDC30-208ENST00000475614 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
CCDC30-208ENST00000475614 MSH5O43196 834 aa20.21■□□□□ 0.83
CCDC30-208ENST00000475614 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
CCDC30-208ENST00000475614 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
CCDC30-208ENST00000475614 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
CCDC30-208ENST00000475614 ADRA2BP18089 450 aa20.02■□□□□ 0.8
CCDC30-208ENST00000475614 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
CCDC30-208ENST00000475614 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
CCDC30-208ENST00000475614 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
CCDC30-208ENST00000475614 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
CCDC30-208ENST00000475614 HOXD11P31277 338 aaPredicted RBP17.58■□□□□ 0.4
CCDC30-208ENST00000475614 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
CCDC30-208ENST00000475614 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
CCDC30-208ENST00000475614 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
CCDC30-208ENST00000475614 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
CCDC30-208ENST00000475614 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
CCDC30-208ENST00000475614 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
CCDC30-208ENST00000475614 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
CCDC30-208ENST00000475614 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
CCDC30-208ENST00000475614 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
CCDC30-208ENST00000475614 KCNA4P22459 653 aa16.74■□□□□ 0.27
CCDC30-208ENST00000475614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCDC30-208ENST00000475614 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
CCDC30-208ENST00000475614 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
CCDC30-208ENST00000475614 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
CCDC30-208ENST00000475614 CAPN15O75808 1086 aa16.15■□□□□ 0.18
CCDC30-208ENST00000475614 DSG3P32926 999 aa16.14■□□□□ 0.17
CCDC30-208ENST00000475614 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
CCDC30-208ENST00000475614 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
CCDC30-208ENST00000475614 ABCB7O75027 752 aa15.8■□□□□ 0.12
CCDC30-208ENST00000475614 APLP2Q06481 763 aa15.8■□□□□ 0.12
CCDC30-208ENST00000475614 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
CCDC30-208ENST00000475614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
CCDC30-208ENST00000475614 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
CCDC30-208ENST00000475614 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
CCDC30-208ENST00000475614 POTEHQ6S545 545 aa15.68■□□□□ 0.1
CCDC30-208ENST00000475614 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
CCDC30-208ENST00000475614 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
CCDC30-208ENST00000475614 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
CCDC30-208ENST00000475614 POLA2Q14181 598 aa15.41■□□□□ 0.06
CCDC30-208ENST00000475614 ZBTB22O15209 634 aa15.37■□□□□ 0.05
CCDC30-208ENST00000475614 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
CCDC30-208ENST00000475614 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
CCDC30-208ENST00000475614 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
CCDC30-208ENST00000475614 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
CCDC30-208ENST00000475614 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
CCDC30-208ENST00000475614 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
CCDC30-208ENST00000475614 ZBTB12Q9Y330 459 aaPredicted RBP15.01□□□□□ -0.01
CCDC30-208ENST00000475614 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
CCDC30-208ENST00000475614 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CCDC30-208ENST00000475614 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
CCDC30-208ENST00000475614 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
CCDC30-208ENST00000475614 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
CCDC30-208ENST00000475614 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC30-208ENST00000475614 SP7Q8TDD2 431 aaPredicted RBP14.61□□□□□ -0.07
CCDC30-208ENST00000475614 FBLN2P98095 1184 aa14.59□□□□□ -0.07
CCDC30-208ENST00000475614 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
CCDC30-208ENST00000475614 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
CCDC30-208ENST00000475614 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
CCDC30-208ENST00000475614 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
CCDC30-208ENST00000475614 HAX1O00165 279 aa14.47□□□□□ -0.09
CCDC30-208ENST00000475614 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
CCDC30-208ENST00000475614 EVX2Q03828 476 aa14.38□□□□□ -0.11
CCDC30-208ENST00000475614 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
CCDC30-208ENST00000475614 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
CCDC30-208ENST00000475614 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
CCDC30-208ENST00000475614 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
CCDC30-208ENST00000475614 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCDC30-208ENST00000475614 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
CCDC30-208ENST00000475614 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
CCDC30-208ENST00000475614 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
CCDC30-208ENST00000475614 GABBR2O75899 941 aa13.98□□□□□ -0.17
CCDC30-208ENST00000475614 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
CCDC30-208ENST00000475614 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
CCDC30-208ENST00000475614 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
CCDC30-208ENST00000475614 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
CCDC30-208ENST00000475614 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
CCDC30-208ENST00000475614 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
CCDC30-208ENST00000475614 LHX8Q68G74 356 aa13.71□□□□□ -0.21
CCDC30-208ENST00000475614 FKBP8Q14318 412 aa13.7□□□□□ -0.22
CCDC30-208ENST00000475614 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
CCDC30-208ENST00000475614 PROM2Q8N271 834 aa13.68□□□□□ -0.22
CCDC30-208ENST00000475614 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
CCDC30-208ENST00000475614 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
CCDC30-208ENST00000475614 CLCN6P51797 869 aa13.61□□□□□ -0.23
CCDC30-208ENST00000475614 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
CCDC30-208ENST00000475614 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
CCDC30-208ENST00000475614 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
CCDC30-208ENST00000475614 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
CCDC30-208ENST00000475614 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
CCDC30-208ENST00000475614 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC30-208ENST00000475614 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
CCDC30-208ENST00000475614 ABCC9O60706 1549 aa13.3□□□□□ -0.28
CCDC30-208ENST00000475614 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
CCDC30-208ENST00000475614 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms