RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 MYO5CQ9NQX4 1742 aa7.3□□□□□ -1.24
CBWD1-212ENST00000475411 NLRP13Q86W25 1043 aa7.3□□□□□ -1.24
CBWD1-212ENST00000475411 LMOD3Q0VAK6 560 aa7.3□□□□□ -1.24
CBWD1-212ENST00000475411 TRAPPC8Q9Y2L5 1435 aa7.3□□□□□ -1.24
CBWD1-212ENST00000475411 C1orf141Q5JVX7 400 aa7.29□□□□□ -1.24
CBWD1-212ENST00000475411 SMG6Q86US8 1419 aaKnown RBP7.29□□□□□ -1.24
CBWD1-212ENST00000475411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.29□□□□□ -1.24
CBWD1-212ENST00000475411 HSPA2P54652 639 aa7.29□□□□□ -1.24
CBWD1-212ENST00000475411 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
CBWD1-212ENST00000475411 RAPGEF4Q8WZA2 1011 aa7.29□□□□□ -1.24
CBWD1-212ENST00000475411 CHMP4BQ9H444 224 aaKnown RBP7.29□□□□□ -1.24
CBWD1-212ENST00000475411 FBXO31Q5XUX0 539 aaPredicted RBP7.28□□□□□ -1.24
CBWD1-212ENST00000475411 HIRIP3Q9BW71 556 aaPredicted RBP7.28□□□□□ -1.24
CBWD1-212ENST00000475411 LTV1Q96GA3 475 aaPredicted RBP7.28□□□□□ -1.24
CBWD1-212ENST00000475411 PRDM11Q9NQV5 511 aa7.28□□□□□ -1.24
CBWD1-212ENST00000475411 CC2D1BQ5T0F9 858 aaKnown RBP7.27□□□□□ -1.25
CBWD1-212ENST00000475411 FAM9BQ8IZU0 186 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 NCOA1Q15788 1441 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 MSH5O43196 834 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 NLRP6P59044 892 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 AMOTL2Q9Y2J4 779 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 IDI1Q13907 227 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 PIAS4Q8N2W9 510 aaPredicted RBP7.27□□□□□ -1.25
CBWD1-212ENST00000475411 PRAM1Q96QH2 718 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 CFAP43Q8NDM7 1665 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 ATAD2Q6PL18 1390 aa7.27□□□□□ -1.25
CBWD1-212ENST00000475411 ABTB2Q8N961 1025 aa7.26□□□□□ -1.25
CBWD1-212ENST00000475411 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
CBWD1-212ENST00000475411 PDE3BQ13370 1112 aa7.26□□□□□ -1.25
CBWD1-212ENST00000475411 RIMS2Q9UQ26 1411 aa7.26□□□□□ -1.25
CBWD1-212ENST00000475411 PRKCSHP14314 528 aaPredicted RBP7.26□□□□□ -1.25
CBWD1-212ENST00000475411 NGLY1Q96IV0 654 aa7.26□□□□□ -1.25
CBWD1-212ENST00000475411 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
CBWD1-212ENST00000475411 ARAP3Q8WWN8 1544 aa7.25□□□□□ -1.25
CBWD1-212ENST00000475411 NLRP2Q9NX02 1062 aa7.25□□□□□ -1.25
CBWD1-212ENST00000475411 NPHP3Q7Z494 1330 aa7.25□□□□□ -1.25
CBWD1-212ENST00000475411 MS4A1P11836 297 aa7.25□□□□□ -1.25
CBWD1-212ENST00000475411 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
CBWD1-212ENST00000475411 KCNH5Q8NCM2 988 aa7.25□□□□□ -1.25
CBWD1-212ENST00000475411 RALBP1Q15311 655 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 MLH3Q9UHC1 1453 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 NCKAP5LQ9HCH0 1330 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 TMEM132EQ6IEE7 984 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 TTC5Q8N0Z6 440 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 HECW2Q9P2P5 1572 aa7.24□□□□□ -1.25
CBWD1-212ENST00000475411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.24□□□□□ -1.25
CBWD1-212ENST00000475411 U2AF1L5P0DN76 240 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-212ENST00000475411 U2AF1Q01081 240 aaKnown RBP eCLIP7.24□□□□□ -1.25
CBWD1-212ENST00000475411 GTF2E1P29083 439 aaPredicted RBP7.23□□□□□ -1.25
CBWD1-212ENST00000475411 GOLGA2Q08379 1002 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 PHF8Q9UPP1 1060 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 C19orf44Q9H6X5 657 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 USP47Q96K76 1375 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 TEFQ10587 303 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 STRN4Q9NRL3 753 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 ZNF330Q9Y3S2 320 aaPredicted RBP7.23□□□□□ -1.25
CBWD1-212ENST00000475411 ERCC6L2Q5T890 1561 aa7.23□□□□□ -1.25
CBWD1-212ENST00000475411 HNRNPUQ00839 825 aaKnown RBP eCLIP7.22□□□□□ -1.25
CBWD1-212ENST00000475411 TOM1L2Q6ZVM7 507 aa7.22□□□□□ -1.25
CBWD1-212ENST00000475411 TBX22Q9Y458 520 aa7.22□□□□□ -1.25
CBWD1-212ENST00000475411 KCNA6P17658 529 aa7.22□□□□□ -1.25
CBWD1-212ENST00000475411 SYTL4Q96C24 671 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-212ENST00000475411 TATP17735 454 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-212ENST00000475411 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
CBWD1-212ENST00000475411 ANP32AP39687 249 aaKnown RBP7.21□□□□□ -1.25
CBWD1-212ENST00000475411 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.25
CBWD1-212ENST00000475411 LRRC59Q96AG4 307 aaKnown RBP7.21□□□□□ -1.25
CBWD1-212ENST00000475411 TCOF1Q13428 1488 aaKnown RBP7.21□□□□□ -1.25
CBWD1-212ENST00000475411 NLRP1Q9C000 1473 aa7.21□□□□□ -1.25
CBWD1-212ENST00000475411 ST20-MTHFSA0A0A6YYL1 179 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 CDK19Q9BWU1 502 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 CCDC61Q9Y6R9 512 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 SHROOM2Q13796 1616 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 NAIPQ13075 1403 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 G3V3G9 751 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 NEUROD2Q15784 382 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 DCAF8Q5TAQ9 597 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 STK31Q9BXU1 1019 aa7.21□□□□□ -1.26
CBWD1-212ENST00000475411 ARHGEF5Q12774 1597 aa7.2□□□□□ -1.26
CBWD1-212ENST00000475411 ADCY10Q96PN6 1610 aa7.2□□□□□ -1.26
CBWD1-212ENST00000475411 GLI2P10070 1586 aa7.2□□□□□ -1.26
CBWD1-212ENST00000475411 YEATS2Q9ULM3 1422 aa7.2□□□□□ -1.26
CBWD1-212ENST00000475411 KDM5DQ9BY66 1539 aa7.2□□□□□ -1.26
CBWD1-212ENST00000475411 HSP90AB1P08238 724 aaKnown RBP7.2□□□□□ -1.26
CBWD1-212ENST00000475411 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
CBWD1-212ENST00000475411 ABCC1P33527 1531 aa7.19□□□□□ -1.26
CBWD1-212ENST00000475411 CABP2Q9NPB3 220 aa7.19□□□□□ -1.26
CBWD1-212ENST00000475411 ADAMTS2O95450 1211 aa7.19□□□□□ -1.26
CBWD1-212ENST00000475411 NOS1P29475 1434 aa7.19□□□□□ -1.26
CBWD1-212ENST00000475411 PLEKHO1Q53GL0 409 aaPredicted RBP7.19□□□□□ -1.26
CBWD1-212ENST00000475411 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
CBWD1-212ENST00000475411 PREX2Q70Z35 1606 aa7.18□□□□□ -1.26
CBWD1-212ENST00000475411 NPHP4O75161 1426 aaPredicted RBP7.18□□□□□ -1.26
CBWD1-212ENST00000475411 KRT28Q7Z3Y7 464 aa7.18□□□□□ -1.26
CBWD1-212ENST00000475411 FTSJ3Q8IY81 847 aaKnown RBP7.18□□□□□ -1.26
CBWD1-212ENST00000475411 KLHL34Q8N239 644 aa7.18□□□□□ -1.26
CBWD1-212ENST00000475411 SPG7Q9UQ90 795 aa7.18□□□□□ -1.26
CBWD1-212ENST00000475411 NCLP19338 710 aaKnown RBP7.18□□□□□ -1.26
CBWD1-212ENST00000475411 USP35Q9P2H5 1018 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms