RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 PLEKHH2Q8IVE3 1493 aa17.76■□□□□ 0.43
SEMA4D-217ENST00000475255 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
SEMA4D-217ENST00000475255 TNNT2P45379 298 aaPredicted RBP17.75■□□□□ 0.43
SEMA4D-217ENST00000475255 RRP7AQ9Y3A4 280 aaKnown RBP17.74■□□□□ 0.43
SEMA4D-217ENST00000475255 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
SEMA4D-217ENST00000475255 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
SEMA4D-217ENST00000475255 USP19O94966 1318 aa17.73■□□□□ 0.43
SEMA4D-217ENST00000475255 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
SEMA4D-217ENST00000475255 PRDM15P57071 1507 aaPredicted RBP17.72■□□□□ 0.43
SEMA4D-217ENST00000475255 WDR7Q9Y4E6 1490 aa17.72■□□□□ 0.43
SEMA4D-217ENST00000475255 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
SEMA4D-217ENST00000475255 SYCP2Q9BX26 1530 aa17.69■□□□□ 0.42
SEMA4D-217ENST00000475255 ABCA8O94911 1581 aa17.69■□□□□ 0.42
SEMA4D-217ENST00000475255 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
SEMA4D-217ENST00000475255 CLUAP1Q96AJ1 413 aa17.69■□□□□ 0.42
SEMA4D-217ENST00000475255 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
SEMA4D-217ENST00000475255 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-217ENST00000475255 GZF1Q9H116 711 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-217ENST00000475255 INSRP06213 1382 aa17.64■□□□□ 0.42
SEMA4D-217ENST00000475255 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.41
SEMA4D-217ENST00000475255 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-217ENST00000475255 NKTRP30414 1462 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-217ENST00000475255 ARHGAP5Q13017 1502 aa17.63■□□□□ 0.41
SEMA4D-217ENST00000475255 E9PSI1 815 aa17.63■□□□□ 0.41
SEMA4D-217ENST00000475255 RLBP1P12271 317 aa17.63■□□□□ 0.41
SEMA4D-217ENST00000475255 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
SEMA4D-217ENST00000475255 PCDHB15Q9Y5E8 787 aa17.62■□□□□ 0.41
SEMA4D-217ENST00000475255 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-217ENST00000475255 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
SEMA4D-217ENST00000475255 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
SEMA4D-217ENST00000475255 CFAP70Q5T0N1 1121 aa17.61■□□□□ 0.41
SEMA4D-217ENST00000475255 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
SEMA4D-217ENST00000475255 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
SEMA4D-217ENST00000475255 RRAGDQ9NQL2 400 aaPredicted RBP17.6■□□□□ 0.41
SEMA4D-217ENST00000475255 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
SEMA4D-217ENST00000475255 ASXL1Q8IXJ9 1541 aa17.59■□□□□ 0.41
SEMA4D-217ENST00000475255 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
SEMA4D-217ENST00000475255 BECN1Q14457 450 aa17.58■□□□□ 0.41
SEMA4D-217ENST00000475255 NUP160Q12769 1436 aa17.58■□□□□ 0.4
SEMA4D-217ENST00000475255 CGNL1Q0VF96 1302 aa17.58■□□□□ 0.4
SEMA4D-217ENST00000475255 CDCA8Q53HL2 280 aa17.58■□□□□ 0.4
SEMA4D-217ENST00000475255 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
SEMA4D-217ENST00000475255 TBC1D2Q9BYX2 928 aa17.57■□□□□ 0.4
SEMA4D-217ENST00000475255 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
SEMA4D-217ENST00000475255 AFAP1Q8N556 730 aa17.56■□□□□ 0.4
SEMA4D-217ENST00000475255 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
SEMA4D-217ENST00000475255 EIF2AK4Q9P2K8 1649 aaKnown RBP17.55■□□□□ 0.4
SEMA4D-217ENST00000475255 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
SEMA4D-217ENST00000475255 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
SEMA4D-217ENST00000475255 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
SEMA4D-217ENST00000475255 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
SEMA4D-217ENST00000475255 RARSP54136 660 aaKnown RBP17.53■□□□□ 0.4
SEMA4D-217ENST00000475255 TCP11L2Q8N4U5 519 aa17.53■□□□□ 0.4
SEMA4D-217ENST00000475255 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
SEMA4D-217ENST00000475255 LAMC1P11047 1609 aa17.53■□□□□ 0.4
SEMA4D-217ENST00000475255 UNC13BO14795 1591 aa17.52■□□□□ 0.4
SEMA4D-217ENST00000475255 SCAF11Q99590 1463 aaKnown RBP17.52■□□□□ 0.4
SEMA4D-217ENST00000475255 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
SEMA4D-217ENST00000475255 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.39
SEMA4D-217ENST00000475255 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.39
SEMA4D-217ENST00000475255 ADGRF5Q8IZF2 1346 aa17.51■□□□□ 0.39
SEMA4D-217ENST00000475255 CHGAP10645 457 aaKnown RBP17.51■□□□□ 0.39
SEMA4D-217ENST00000475255 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
SEMA4D-217ENST00000475255 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
SEMA4D-217ENST00000475255 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
SEMA4D-217ENST00000475255 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
SEMA4D-217ENST00000475255 IQGAP3Q86VI3 1631 aa17.5■□□□□ 0.39
SEMA4D-217ENST00000475255 XRCC6P12956 609 aaKnown RBP eCLIP17.49■□□□□ 0.39
SEMA4D-217ENST00000475255 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
SEMA4D-217ENST00000475255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
SEMA4D-217ENST00000475255 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
SEMA4D-217ENST00000475255 TRAPPC8Q9Y2L5 1435 aa17.48■□□□□ 0.39
SEMA4D-217ENST00000475255 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
SEMA4D-217ENST00000475255 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
SEMA4D-217ENST00000475255 RNF17Q9BXT8 1623 aaKnown RBP17.48■□□□□ 0.39
SEMA4D-217ENST00000475255 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-217ENST00000475255 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
SEMA4D-217ENST00000475255 SYNMO15061 1565 aa17.47■□□□□ 0.39
SEMA4D-217ENST00000475255 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
SEMA4D-217ENST00000475255 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
SEMA4D-217ENST00000475255 ABCC2Q92887 1545 aa17.46■□□□□ 0.39
SEMA4D-217ENST00000475255 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
SEMA4D-217ENST00000475255 MTHFSP49914 203 aa17.45■□□□□ 0.38
SEMA4D-217ENST00000475255 KIF3BO15066 747 aa17.45■□□□□ 0.38
SEMA4D-217ENST00000475255 SPAG9O60271 1321 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-217ENST00000475255 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
SEMA4D-217ENST00000475255 MYOM1P52179 1685 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 DUOX2Q9NRD8 1548 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 TMEM132EQ6IEE7 984 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 ATP10AO60312 1499 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 GOLGA6L3A6NEY3 463 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 MCM4P33991 863 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 EFCAB2Q5VUJ9 269 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 RUNDC1Q96C34 613 aa17.44■□□□□ 0.38
SEMA4D-217ENST00000475255 FTSJ3Q8IY81 847 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-217ENST00000475255 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
SEMA4D-217ENST00000475255 UGGT1Q9NYU2 1555 aa17.43■□□□□ 0.38
SEMA4D-217ENST00000475255 L1TD1Q5T7N2 865 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-217ENST00000475255 NUTM2DQ5VT03 806 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-217ENST00000475255 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms