RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PLEKHG1Q9ULL1 1385 aa33.86■■■■□ 3.01
PTP4A1-203ENST00000473334 TRPM2O94759 1503 aa33.85■■■■□ 3.01
PTP4A1-203ENST00000473334 PPP1R15AO75807 674 aaPredicted RBP33.85■■■■□ 3.01
PTP4A1-203ENST00000473334 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.85■■■■□ 3.01
PTP4A1-203ENST00000473334 SLC26A8Q96RN1 970 aa33.85■■■■□ 3.01
PTP4A1-203ENST00000473334 BCANQ96GW7 911 aa33.82■■■■□ 3
PTP4A1-203ENST00000473334 CLTCL1P53675 1640 aa33.82■■■■□ 3
PTP4A1-203ENST00000473334 TOM1O60784 492 aa33.81■■■■□ 3
PTP4A1-203ENST00000473334 SLC4A1APQ9BWU0 796 aaKnown RBP33.79■■■■□ 3
PTP4A1-203ENST00000473334 NWD1Q149M9 1564 aa33.77■■■■□ 3
PTP4A1-203ENST00000473334 XIRP1Q702N8 1843 aaKnown RBP33.77■■■■□ 3
PTP4A1-203ENST00000473334 KCNA6P17658 529 aa33.76■■■□□ 2.99
PTP4A1-203ENST00000473334 SENP3Q9H4L4 574 aaPredicted RBP33.75■■■□□ 2.99
PTP4A1-203ENST00000473334 KIF1BO60333 1816 aa33.74■■■□□ 2.99
PTP4A1-203ENST00000473334 NUTM2DQ5VT03 806 aaPredicted RBP33.74■■■□□ 2.99
PTP4A1-203ENST00000473334 ALKQ9UM73 1620 aa33.74■■■□□ 2.99
PTP4A1-203ENST00000473334 DIP2AQ14689 1571 aa33.72■■■□□ 2.99
PTP4A1-203ENST00000473334 NKTRP30414 1462 aaKnown RBP33.72■■■□□ 2.99
PTP4A1-203ENST00000473334 CHD2O14647 1828 aaKnown RBP33.71■■■□□ 2.99
PTP4A1-203ENST00000473334 PIP4K2BP78356 416 aa33.7■■■□□ 2.99
PTP4A1-203ENST00000473334 SCAF1Q9H7N4 1312 aaKnown RBP33.7■■■□□ 2.99
PTP4A1-203ENST00000473334 ADAMTS13Q76LX8 1427 aa33.7■■■□□ 2.98
PTP4A1-203ENST00000473334 ZNF326Q5BKZ1 582 aaKnown RBP33.69■■■□□ 2.98
PTP4A1-203ENST00000473334 TBX22Q9Y458 520 aa33.69■■■□□ 2.98
PTP4A1-203ENST00000473334 SETD5Q9C0A6 1442 aa33.67■■■□□ 2.98
PTP4A1-203ENST00000473334 TMEM94Q12767 1356 aa33.65■■■□□ 2.98
PTP4A1-203ENST00000473334 NEXMIFQ5QGS0 1516 aa33.64■■■□□ 2.98
PTP4A1-203ENST00000473334 ACIN1Q9UKV3 1341 aaKnown RBP33.64■■■□□ 2.98
PTP4A1-203ENST00000473334 PROSER2Q86WR7 435 aaPredicted RBP33.63■■■□□ 2.97
PTP4A1-203ENST00000473334 NRXN3Q9Y4C0 1643 aa33.62■■■□□ 2.97
PTP4A1-203ENST00000473334 SETBP1Q9Y6X0 1596 aa33.62■■■□□ 2.97
PTP4A1-203ENST00000473334 PIK3R4Q99570 1358 aa33.6■■■□□ 2.97
PTP4A1-203ENST00000473334 MPHOSPH9Q99550 1183 aa33.6■■■□□ 2.97
PTP4A1-203ENST00000473334 FOXD1Q16676 465 aa33.59■■■□□ 2.97
PTP4A1-203ENST00000473334 RAB3GAP2Q9H2M9 1393 aa33.55■■■□□ 2.96
PTP4A1-203ENST00000473334 HSPA1LP34931 641 aa33.54■■■□□ 2.96
PTP4A1-203ENST00000473334 RBM33Q96EV2 1170 aaKnown RBP33.54■■■□□ 2.96
PTP4A1-203ENST00000473334 CCDC144AA2RUR9 1427 aa33.52■■■□□ 2.96
PTP4A1-203ENST00000473334 PTPRUQ92729 1446 aa33.49■■■□□ 2.95
PTP4A1-203ENST00000473334 PPLO60437 1756 aa33.49■■■□□ 2.95
PTP4A1-203ENST00000473334 RPGRIP1LQ68CZ1 1315 aa33.49■■■□□ 2.95
PTP4A1-203ENST00000473334 MSH6P52701 1360 aa33.48■■■□□ 2.95
PTP4A1-203ENST00000473334 NCOA3Q9Y6Q9 1424 aa33.47■■■□□ 2.95
PTP4A1-203ENST00000473334 XRN1Q8IZH2 1706 aaKnown RBP33.46■■■□□ 2.95
PTP4A1-203ENST00000473334 VGFO15240 615 aaPredicted RBP33.45■■■□□ 2.95
PTP4A1-203ENST00000473334 AMOTL2Q9Y2J4 779 aa33.45■■■□□ 2.95
PTP4A1-203ENST00000473334 METP08581 1390 aa33.42■■■□□ 2.94
PTP4A1-203ENST00000473334 FAM135BQ49AJ0 1406 aa33.41■■■□□ 2.94
PTP4A1-203ENST00000473334 SPATA31E1Q6ZUB1 1445 aa33.4■■■□□ 2.94
PTP4A1-203ENST00000473334 DISP3Q9P2K9 1392 aa33.4■■■□□ 2.94
PTP4A1-203ENST00000473334 SETD1AO15047 1707 aaKnown RBP33.39■■■□□ 2.94
PTP4A1-203ENST00000473334 ROBO1Q9Y6N7 1651 aa33.37■■■□□ 2.93
PTP4A1-203ENST00000473334 IFT172Q9UG01 1749 aa33.36■■■□□ 2.93
PTP4A1-203ENST00000473334 C14orf37Q86TY3 774 aa33.36■■■□□ 2.93
PTP4A1-203ENST00000473334 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.36■■■□□ 2.93
PTP4A1-203ENST00000473334 HRCP23327 699 aa33.33■■■□□ 2.93
PTP4A1-203ENST00000473334 RGL3Q3MIN7 710 aa33.32■■■□□ 2.92
PTP4A1-203ENST00000473334 C19orf44Q9H6X5 657 aa33.31■■■□□ 2.92
PTP4A1-203ENST00000473334 SLAIN2Q9P270 581 aa33.3■■■□□ 2.92
PTP4A1-203ENST00000473334 ANKRD30BQ9BXX2 1392 aa33.3■■■□□ 2.92
PTP4A1-203ENST00000473334 CADPS2Q86UW7 1296 aa33.27■■■□□ 2.92
PTP4A1-203ENST00000473334 MED1Q15648 1581 aaPredicted RBP33.26■■■□□ 2.92
PTP4A1-203ENST00000473334 ADGRF5Q8IZF2 1346 aa33.26■■■□□ 2.91
PTP4A1-203ENST00000473334 ATF3P18847 181 aa33.25■■■□□ 2.91
PTP4A1-203ENST00000473334 DCCP43146 1447 aa33.25■■■□□ 2.91
PTP4A1-203ENST00000473334 PTCH1Q13635 1447 aa33.23■■■□□ 2.91
PTP4A1-203ENST00000473334 PRAG1Q86YV5 1406 aa33.22■■■□□ 2.91
PTP4A1-203ENST00000473334 NALCNQ8IZF0 1738 aa33.2■■■□□ 2.91
PTP4A1-203ENST00000473334 ADGRL3Q9HAR2 1447 aa33.19■■■□□ 2.9
PTP4A1-203ENST00000473334 PIK3C2GO75747 1445 aa33.18■■■□□ 2.9
PTP4A1-203ENST00000473334 PHLPP1O60346 1717 aa33.17■■■□□ 2.9
PTP4A1-203ENST00000473334 ROBO2Q9HCK4 1378 aa33.15■■■□□ 2.9
PTP4A1-203ENST00000473334 MYOM2P54296 1465 aa33.14■■■□□ 2.9
PTP4A1-203ENST00000473334 NRXN1Q9ULB1 1477 aa33.12■■■□□ 2.89
PTP4A1-203ENST00000473334 ASXL1Q8IXJ9 1541 aa33.11■■■□□ 2.89
PTP4A1-203ENST00000473334 MST1RQ04912 1400 aa33.11■■■□□ 2.89
PTP4A1-203ENST00000473334 AHDC1Q5TGY3 1603 aaPredicted RBP33.09■■■□□ 2.89
PTP4A1-203ENST00000473334 ILDR2Q71H61 639 aa33.08■■■□□ 2.89
PTP4A1-203ENST00000473334 LAMC1P11047 1609 aa33.08■■■□□ 2.89
PTP4A1-203ENST00000473334 COL16A1Q07092 1604 aaPredicted RBP33.08■■■□□ 2.89
PTP4A1-203ENST00000473334 KNDC1Q76NI1 1749 aa33.08■■■□□ 2.89
PTP4A1-203ENST00000473334 TECPR2O15040 1411 aa33.06■■■□□ 2.88
PTP4A1-203ENST00000473334 BRINP3Q76B58 766 aa33.05■■■□□ 2.88
PTP4A1-203ENST00000473334 LRPPRCP42704 1394 aaKnown RBP33.05■■■□□ 2.88
PTP4A1-203ENST00000473334 TMEM132EQ6IEE7 984 aa33.02■■■□□ 2.88
PTP4A1-203ENST00000473334 ABCC11Q96J66 1382 aa33.01■■■□□ 2.88
PTP4A1-203ENST00000473334 C14orf93Q9H972 538 aaKnown RBP33.01■■■□□ 2.87
PTP4A1-203ENST00000473334 STK26Q9P289 416 aa33.01■■■□□ 2.87
PTP4A1-203ENST00000473334 PHF23Q9BUL5 403 aaPredicted RBP33■■■□□ 2.87
PTP4A1-203ENST00000473334 YTHDC2Q9H6S0 1430 aaKnown RBP33■■■□□ 2.87
PTP4A1-203ENST00000473334 JCADQ9P266 1359 aa32.99■■■□□ 2.87
PTP4A1-203ENST00000473334 NHSL1Q5SYE7 1610 aa32.98■■■□□ 2.87
PTP4A1-203ENST00000473334 C1orf167Q5SNV9 1468 aa32.97■■■□□ 2.87
PTP4A1-203ENST00000473334 CDC42BPGQ6DT37 1551 aa32.96■■■□□ 2.87
PTP4A1-203ENST00000473334 CFAP70Q5T0N1 1121 aa32.96■■■□□ 2.87
PTP4A1-203ENST00000473334 DHX57Q6P158 1386 aaKnown RBP32.93■■■□□ 2.86
PTP4A1-203ENST00000473334 WAPLQ7Z5K2 1190 aa32.92■■■□□ 2.86
PTP4A1-203ENST00000473334 DCAF11Q8TEB1 546 aa32.92■■■□□ 2.86
PTP4A1-203ENST00000473334 SHPRHQ149N8 1683 aa32.91■■■□□ 2.86
PTP4A1-203ENST00000473334 STAC3Q96MF2 364 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms