RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 TPM4P67936 248 aa21.19■□□□□ 0.98
LAMP1-203ENST00000472564 HSP90AA2PQ14568 343 aaPredicted RBP21.18■□□□□ 0.98
LAMP1-203ENST00000472564 AAMPQ13685 434 aa21.18■□□□□ 0.98
LAMP1-203ENST00000472564 LNPKQ9C0E8 428 aa21.18■□□□□ 0.98
LAMP1-203ENST00000472564 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
LAMP1-203ENST00000472564 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
LAMP1-203ENST00000472564 TAF7LQ5H9L4 462 aa21.16■□□□□ 0.98
LAMP1-203ENST00000472564 C22orf23Q9BZE7 217 aa21.16■□□□□ 0.98
LAMP1-203ENST00000472564 ATP6V1DQ9Y5K8 247 aa21.16■□□□□ 0.98
LAMP1-203ENST00000472564 PRXQ9BXM0 1461 aa21.16■□□□□ 0.98
LAMP1-203ENST00000472564 KIF3AQ9Y496 699 aa21.16■□□□□ 0.98
LAMP1-203ENST00000472564 CFTRP13569 1480 aa21.15■□□□□ 0.98
LAMP1-203ENST00000472564 PNISRQ8TF01 805 aaKnown RBP21.14■□□□□ 0.98
LAMP1-203ENST00000472564 CCDC34Q96HJ3 373 aa21.13■□□□□ 0.97
LAMP1-203ENST00000472564 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
LAMP1-203ENST00000472564 PPP2R1AP30153 589 aa21.12■□□□□ 0.97
LAMP1-203ENST00000472564 AKNAQ7Z591 1439 aa21.12■□□□□ 0.97
LAMP1-203ENST00000472564 NBPF1Q3BBV0 1214 aa21.12■□□□□ 0.97
LAMP1-203ENST00000472564 ISY1Q9ULR0 285 aaKnown RBP21.12■□□□□ 0.97
LAMP1-203ENST00000472564 TCP11L2Q8N4U5 519 aa21.11■□□□□ 0.97
LAMP1-203ENST00000472564 SF3A1Q15459 793 aaKnown RBP21.11■□□□□ 0.97
LAMP1-203ENST00000472564 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
LAMP1-203ENST00000472564 GGNBP2Q9H3C7 697 aa21.11■□□□□ 0.97
LAMP1-203ENST00000472564 MTHFSP49914 203 aa21.1■□□□□ 0.97
LAMP1-203ENST00000472564 DIAPH3Q9NSV4 1193 aa21.1■□□□□ 0.97
LAMP1-203ENST00000472564 GNAI1P63096 354 aa21.1■□□□□ 0.97
LAMP1-203ENST00000472564 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.97
LAMP1-203ENST00000472564 TEFQ10587 303 aa21.09■□□□□ 0.97
LAMP1-203ENST00000472564 H3BQV1 296 aa21.08■□□□□ 0.96
LAMP1-203ENST00000472564 IFFO2Q5TF58 517 aa21.08■□□□□ 0.96
LAMP1-203ENST00000472564 ANO2Q9NQ90 1003 aa21.07■□□□□ 0.96
LAMP1-203ENST00000472564 HMOX1P09601 288 aa21.07■□□□□ 0.96
LAMP1-203ENST00000472564 CFAP70Q5T0N1 1121 aa21.07■□□□□ 0.96
LAMP1-203ENST00000472564 NUCB2P80303 420 aa21.06■□□□□ 0.96
LAMP1-203ENST00000472564 INTS3Q68E01 1043 aaKnown RBP21.06■□□□□ 0.96
LAMP1-203ENST00000472564 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
LAMP1-203ENST00000472564 FAM184AQ8NB25 1140 aa21.06■□□□□ 0.96
LAMP1-203ENST00000472564 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
LAMP1-203ENST00000472564 RUFY2Q8WXA3 655 aa21.06■□□□□ 0.96
LAMP1-203ENST00000472564 ROCK1Q13464 1354 aa21.05■□□□□ 0.96
LAMP1-203ENST00000472564 FKBP5Q13451 457 aaPredicted RBP21.05■□□□□ 0.96
LAMP1-203ENST00000472564 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
LAMP1-203ENST00000472564 ZKSCAN1P17029 563 aaPredicted RBP21.05■□□□□ 0.96
LAMP1-203ENST00000472564 NECTIN2Q92692 538 aa21.04■□□□□ 0.96
LAMP1-203ENST00000472564 PDE3AQ14432 1141 aa21.04■□□□□ 0.96
LAMP1-203ENST00000472564 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
LAMP1-203ENST00000472564 C9orf78Q9NZ63 289 aaPredicted RBP21.04■□□□□ 0.96
LAMP1-203ENST00000472564 CABP2Q9NPB3 220 aa21.03■□□□□ 0.96
LAMP1-203ENST00000472564 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
LAMP1-203ENST00000472564 GOLGA6L19H0YKK7 550 aa21.03■□□□□ 0.96
LAMP1-203ENST00000472564 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
LAMP1-203ENST00000472564 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
LAMP1-203ENST00000472564 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
LAMP1-203ENST00000472564 CCDC9Q9Y3X0 531 aaKnown RBP21.02■□□□□ 0.96
LAMP1-203ENST00000472564 BECN2A8MW95 431 aa21.02■□□□□ 0.96
LAMP1-203ENST00000472564 SMG6Q86US8 1419 aaKnown RBP21.01■□□□□ 0.95
LAMP1-203ENST00000472564 FRAT2O75474 233 aaPredicted RBP21.01■□□□□ 0.95
LAMP1-203ENST00000472564 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
LAMP1-203ENST00000472564 PDZRN3Q9UPQ7 1066 aa21.01■□□□□ 0.95
LAMP1-203ENST00000472564 BCAR3O75815 825 aa21■□□□□ 0.95
LAMP1-203ENST00000472564 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
LAMP1-203ENST00000472564 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
LAMP1-203ENST00000472564 CHMP4CQ96CF2 233 aa20.99■□□□□ 0.95
LAMP1-203ENST00000472564 CDC45O75419 566 aa20.99■□□□□ 0.95
LAMP1-203ENST00000472564 IFIT2P09913 472 aaKnown RBP20.98■□□□□ 0.95
LAMP1-203ENST00000472564 MRE11P49959 708 aa20.98■□□□□ 0.95
LAMP1-203ENST00000472564 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
LAMP1-203ENST00000472564 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
LAMP1-203ENST00000472564 RASSF8Q8NHQ8 419 aa20.98■□□□□ 0.95
LAMP1-203ENST00000472564 EXOSC9Q06265 439 aaKnown RBP20.98■□□□□ 0.95
LAMP1-203ENST00000472564 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
LAMP1-203ENST00000472564 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
LAMP1-203ENST00000472564 EFCAB5A4FU69 1503 aa20.96■□□□□ 0.95
LAMP1-203ENST00000472564 TRAK2O60296 914 aa20.96■□□□□ 0.95
LAMP1-203ENST00000472564 CREBRFQ8IUR6 639 aa20.96■□□□□ 0.95
LAMP1-203ENST00000472564 VSIG10Q8N0Z9 540 aa20.96■□□□□ 0.95
LAMP1-203ENST00000472564 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.95■□□□□ 0.94
LAMP1-203ENST00000472564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.95■□□□□ 0.94
LAMP1-203ENST00000472564 SMC3Q9UQE7 1217 aa20.94■□□□□ 0.94
LAMP1-203ENST00000472564 VPS37CA5D8V6 355 aaPredicted RBP20.93■□□□□ 0.94
LAMP1-203ENST00000472564 SLC12A5Q9H2X9 1139 aa20.93■□□□□ 0.94
LAMP1-203ENST00000472564 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
LAMP1-203ENST00000472564 BRPF3Q9ULD4 1205 aa20.93■□□□□ 0.94
LAMP1-203ENST00000472564 EHBP1L1Q8N3D4 1523 aa20.93■□□□□ 0.94
LAMP1-203ENST00000472564 CLSTN1O94985 981 aa20.92■□□□□ 0.94
LAMP1-203ENST00000472564 RNF20Q5VTR2 975 aa20.92■□□□□ 0.94
LAMP1-203ENST00000472564 NAIPQ13075 1403 aa20.92■□□□□ 0.94
LAMP1-203ENST00000472564 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
LAMP1-203ENST00000472564 C9orf84Q5VXU9 1444 aa20.92■□□□□ 0.94
LAMP1-203ENST00000472564 FAM13BQ9NYF5 915 aa20.91■□□□□ 0.94
LAMP1-203ENST00000472564 G3BP1Q13283 466 aaKnown RBP eCLIP20.91■□□□□ 0.94
LAMP1-203ENST00000472564 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
LAMP1-203ENST00000472564 PRKAR2BP31323 418 aa20.91■□□□□ 0.94
LAMP1-203ENST00000472564 BICD2Q8TD16 824 aa20.91■□□□□ 0.94
LAMP1-203ENST00000472564 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.91■□□□□ 0.94
LAMP1-203ENST00000472564 TPM3P06753 285 aa20.9■□□□□ 0.94
LAMP1-203ENST00000472564 CPLX2Q6PUV4 134 aaKnown RBP20.9■□□□□ 0.94
LAMP1-203ENST00000472564 TSR2Q969E8 191 aaKnown RBP20.9■□□□□ 0.94
LAMP1-203ENST00000472564 DDX58O95786 925 aaKnown RBP20.9■□□□□ 0.94
LAMP1-203ENST00000472564 NASPP49321 788 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms