RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
SEC16A-209ENST00000472305 TMEM2Q9UHN6 1383 aa18.75■□□□□ 0.59
SEC16A-209ENST00000472305 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
SEC16A-209ENST00000472305 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
SEC16A-209ENST00000472305 ARHGAP23Q9P227 1491 aa18.73■□□□□ 0.59
SEC16A-209ENST00000472305 MYO5BQ9ULV0 1848 aa18.73■□□□□ 0.59
SEC16A-209ENST00000472305 TXNDC2Q86VQ3 553 aa18.73■□□□□ 0.59
SEC16A-209ENST00000472305 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
SEC16A-209ENST00000472305 ZFYVE9O95405 1425 aa18.71■□□□□ 0.59
SEC16A-209ENST00000472305 SLIT1O75093 1534 aa18.7■□□□□ 0.58
SEC16A-209ENST00000472305 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
SEC16A-209ENST00000472305 KIF1BO60333 1816 aa18.7■□□□□ 0.58
SEC16A-209ENST00000472305 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
SEC16A-209ENST00000472305 EID1Q9Y6B2 187 aa18.67■□□□□ 0.58
SEC16A-209ENST00000472305 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
SEC16A-209ENST00000472305 RPGRIP1LQ68CZ1 1315 aa18.66■□□□□ 0.58
SEC16A-209ENST00000472305 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
SEC16A-209ENST00000472305 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
SEC16A-209ENST00000472305 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
SEC16A-209ENST00000472305 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
SEC16A-209ENST00000472305 ADGRF5Q8IZF2 1346 aa18.65■□□□□ 0.58
SEC16A-209ENST00000472305 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.64■□□□□ 0.57
SEC16A-209ENST00000472305 DCAF11Q8TEB1 546 aa18.64■□□□□ 0.57
SEC16A-209ENST00000472305 NEURL4Q96JN8 1562 aa18.64■□□□□ 0.57
SEC16A-209ENST00000472305 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
SEC16A-209ENST00000472305 HDGFP51858 240 aaKnown RBP18.62■□□□□ 0.57
SEC16A-209ENST00000472305 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
SEC16A-209ENST00000472305 PLEKHG1Q9ULL1 1385 aa18.6■□□□□ 0.57
SEC16A-209ENST00000472305 VGFO15240 615 aaPredicted RBP18.6■□□□□ 0.57
SEC16A-209ENST00000472305 BCANQ96GW7 911 aa18.6■□□□□ 0.57
SEC16A-209ENST00000472305 SLC26A8Q96RN1 970 aa18.6■□□□□ 0.57
SEC16A-209ENST00000472305 MED14O60244 1454 aa18.59■□□□□ 0.57
SEC16A-209ENST00000472305 PPLO60437 1756 aa18.58■□□□□ 0.57
SEC16A-209ENST00000472305 TONSLQ96HA7 1378 aa18.57■□□□□ 0.56
SEC16A-209ENST00000472305 POLR1AO95602 1720 aaPredicted RBP18.57■□□□□ 0.56
SEC16A-209ENST00000472305 ADAMTS13Q76LX8 1427 aa18.57■□□□□ 0.56
SEC16A-209ENST00000472305 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
SEC16A-209ENST00000472305 IFT172Q9UG01 1749 aa18.56■□□□□ 0.56
SEC16A-209ENST00000472305 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
SEC16A-209ENST00000472305 MYOM2P54296 1465 aa18.54■□□□□ 0.56
SEC16A-209ENST00000472305 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
SEC16A-209ENST00000472305 NRXN1Q9ULB1 1477 aa18.53■□□□□ 0.56
SEC16A-209ENST00000472305 NRXN3Q9Y4C0 1643 aa18.53■□□□□ 0.56
SEC16A-209ENST00000472305 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
SEC16A-209ENST00000472305 PIK3C2GO75747 1445 aa18.52■□□□□ 0.56
SEC16A-209ENST00000472305 TBX22Q9Y458 520 aa18.52■□□□□ 0.56
SEC16A-209ENST00000472305 IQGAP1P46940 1657 aa18.52■□□□□ 0.56
SEC16A-209ENST00000472305 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
SEC16A-209ENST00000472305 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
SEC16A-209ENST00000472305 METP08581 1390 aa18.5■□□□□ 0.55
SEC16A-209ENST00000472305 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
SEC16A-209ENST00000472305 PRAG1Q86YV5 1406 aa18.49■□□□□ 0.55
SEC16A-209ENST00000472305 TMEM132EQ6IEE7 984 aa18.49■□□□□ 0.55
SEC16A-209ENST00000472305 STAC3Q96MF2 364 aa18.49■□□□□ 0.55
SEC16A-209ENST00000472305 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
SEC16A-209ENST00000472305 NBPF1Q3BBV0 1214 aa18.47■□□□□ 0.55
SEC16A-209ENST00000472305 PTPRUQ92729 1446 aa18.47■□□□□ 0.55
SEC16A-209ENST00000472305 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.55
SEC16A-209ENST00000472305 ASXL1Q8IXJ9 1541 aa18.44■□□□□ 0.54
SEC16A-209ENST00000472305 KCNA6P17658 529 aa18.43■□□□□ 0.54
SEC16A-209ENST00000472305 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
SEC16A-209ENST00000472305 SETD1AO15047 1707 aaKnown RBP18.43■□□□□ 0.54
SEC16A-209ENST00000472305 STK26Q9P289 416 aa18.42■□□□□ 0.54
SEC16A-209ENST00000472305 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
SEC16A-209ENST00000472305 HSPA1LP34931 641 aa18.41■□□□□ 0.54
SEC16A-209ENST00000472305 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
SEC16A-209ENST00000472305 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
SEC16A-209ENST00000472305 ADGRB1O14514 1584 aa18.39■□□□□ 0.53
SEC16A-209ENST00000472305 STRCP1A6NGW2 1772 aa18.39■□□□□ 0.53
SEC16A-209ENST00000472305 LRPPRCP42704 1394 aaKnown RBP18.37■□□□□ 0.53
SEC16A-209ENST00000472305 YTHDC2Q9H6S0 1430 aaKnown RBP18.37■□□□□ 0.53
SEC16A-209ENST00000472305 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
SEC16A-209ENST00000472305 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
SEC16A-209ENST00000472305 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
SEC16A-209ENST00000472305 ROBO2Q9HCK4 1378 aa18.35■□□□□ 0.53
SEC16A-209ENST00000472305 TRPM1Q7Z4N2 1603 aa18.34■□□□□ 0.53
SEC16A-209ENST00000472305 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
SEC16A-209ENST00000472305 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
SEC16A-209ENST00000472305 ABCC11Q96J66 1382 aa18.34■□□□□ 0.53
SEC16A-209ENST00000472305 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
SEC16A-209ENST00000472305 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
SEC16A-209ENST00000472305 LAMC1P11047 1609 aa18.34■□□□□ 0.53
SEC16A-209ENST00000472305 PLEKHH1Q9ULM0 1364 aa18.33■□□□□ 0.53
SEC16A-209ENST00000472305 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
SEC16A-209ENST00000472305 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
SEC16A-209ENST00000472305 XRN1Q8IZH2 1706 aaKnown RBP18.32■□□□□ 0.52
SEC16A-209ENST00000472305 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
SEC16A-209ENST00000472305 GPRASP1Q5JY77 1395 aa18.31■□□□□ 0.52
SEC16A-209ENST00000472305 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
SEC16A-209ENST00000472305 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
SEC16A-209ENST00000472305 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
SEC16A-209ENST00000472305 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
SEC16A-209ENST00000472305 TOM1O60784 492 aa18.3■□□□□ 0.52
SEC16A-209ENST00000472305 TECPR2O15040 1411 aa18.3■□□□□ 0.52
SEC16A-209ENST00000472305 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
SEC16A-209ENST00000472305 PRAM1Q96QH2 718 aa18.29■□□□□ 0.52
SEC16A-209ENST00000472305 CPS1P31327 1500 aa18.28■□□□□ 0.52
SEC16A-209ENST00000472305 NKTRP30414 1462 aaKnown RBP18.28■□□□□ 0.52
SEC16A-209ENST00000472305 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
SEC16A-209ENST00000472305 SIRT1Q96EB6 747 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms