RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 EID1Q9Y6B2 187 aa21.33■■□□□ 1.01
COMMD3-208ENST00000470045 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
COMMD3-208ENST00000470045 RIMS2Q9UQ26 1411 aa21.26■□□□□ 0.99
COMMD3-208ENST00000470045 TRPM2O94759 1503 aa21.25■□□□□ 0.99
COMMD3-208ENST00000470045 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
COMMD3-208ENST00000470045 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
COMMD3-208ENST00000470045 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
COMMD3-208ENST00000470045 NWD1Q149M9 1564 aa21.23■□□□□ 0.99
COMMD3-208ENST00000470045 CLTCL1P53675 1640 aa21.23■□□□□ 0.99
COMMD3-208ENST00000470045 UBAP1LF5GYI3 381 aa21.22■□□□□ 0.99
COMMD3-208ENST00000470045 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
COMMD3-208ENST00000470045 DIP2AQ14689 1571 aa21.18■□□□□ 0.98
COMMD3-208ENST00000470045 KIF1BO60333 1816 aa21.18■□□□□ 0.98
COMMD3-208ENST00000470045 HDGFP51858 240 aaKnown RBP21.17■□□□□ 0.98
COMMD3-208ENST00000470045 NKTRP30414 1462 aaKnown RBP21.17■□□□□ 0.98
COMMD3-208ENST00000470045 CHGAP10645 457 aaKnown RBP21.16■□□□□ 0.98
COMMD3-208ENST00000470045 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.16■□□□□ 0.98
COMMD3-208ENST00000470045 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
COMMD3-208ENST00000470045 ADAMTS13Q76LX8 1427 aa21.14■□□□□ 0.98
COMMD3-208ENST00000470045 TOM1O60784 492 aa21.14■□□□□ 0.97
COMMD3-208ENST00000470045 KCNA6P17658 529 aa21.14■□□□□ 0.97
COMMD3-208ENST00000470045 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
COMMD3-208ENST00000470045 NRXN3Q9Y4C0 1643 aa21.14■□□□□ 0.97
COMMD3-208ENST00000470045 PPP1R15AO75807 674 aaPredicted RBP21.13■□□□□ 0.97
COMMD3-208ENST00000470045 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
COMMD3-208ENST00000470045 SETBP1Q9Y6X0 1596 aa21.12■□□□□ 0.97
COMMD3-208ENST00000470045 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
COMMD3-208ENST00000470045 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
COMMD3-208ENST00000470045 TMEM94Q12767 1356 aa21.08■□□□□ 0.96
COMMD3-208ENST00000470045 PIK3R4Q99570 1358 aa21.08■□□□□ 0.96
COMMD3-208ENST00000470045 NUTM2DQ5VT03 806 aaPredicted RBP21.07■□□□□ 0.96
COMMD3-208ENST00000470045 BCANQ96GW7 911 aa21.07■□□□□ 0.96
COMMD3-208ENST00000470045 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
COMMD3-208ENST00000470045 ACIN1Q9UKV3 1341 aaKnown RBP21.04■□□□□ 0.96
COMMD3-208ENST00000470045 XRN1Q8IZH2 1706 aaKnown RBP21.04■□□□□ 0.96
COMMD3-208ENST00000470045 PIP4K2BP78356 416 aa21.04■□□□□ 0.96
COMMD3-208ENST00000470045 PPLO60437 1756 aa21.04■□□□□ 0.96
COMMD3-208ENST00000470045 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.96
COMMD3-208ENST00000470045 PROSER2Q86WR7 435 aaPredicted RBP21.02■□□□□ 0.96
COMMD3-208ENST00000470045 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
COMMD3-208ENST00000470045 SETD1AO15047 1707 aaKnown RBP21.01■□□□□ 0.95
COMMD3-208ENST00000470045 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
COMMD3-208ENST00000470045 PTPRUQ92729 1446 aa21■□□□□ 0.95
COMMD3-208ENST00000470045 NCOA3Q9Y6Q9 1424 aa21■□□□□ 0.95
COMMD3-208ENST00000470045 RAB3GAP2Q9H2M9 1393 aa20.99■□□□□ 0.95
COMMD3-208ENST00000470045 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
COMMD3-208ENST00000470045 HSPA1LP34931 641 aa20.99■□□□□ 0.95
COMMD3-208ENST00000470045 CCDC144AA2RUR9 1427 aa20.97■□□□□ 0.95
COMMD3-208ENST00000470045 SPATA31E1Q6ZUB1 1445 aa20.96■□□□□ 0.95
COMMD3-208ENST00000470045 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
COMMD3-208ENST00000470045 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
COMMD3-208ENST00000470045 MSH6P52701 1360 aa20.96■□□□□ 0.95
COMMD3-208ENST00000470045 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.95
COMMD3-208ENST00000470045 ROBO1Q9Y6N7 1651 aa20.95■□□□□ 0.94
COMMD3-208ENST00000470045 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.94■□□□□ 0.94
COMMD3-208ENST00000470045 METP08581 1390 aa20.94■□□□□ 0.94
COMMD3-208ENST00000470045 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
COMMD3-208ENST00000470045 VGFO15240 615 aaPredicted RBP20.91■□□□□ 0.94
COMMD3-208ENST00000470045 PRAG1Q86YV5 1406 aa20.9■□□□□ 0.94
COMMD3-208ENST00000470045 DISP3Q9P2K9 1392 aa20.89■□□□□ 0.93
COMMD3-208ENST00000470045 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.93
COMMD3-208ENST00000470045 DCCP43146 1447 aa20.87■□□□□ 0.93
COMMD3-208ENST00000470045 HRCP23327 699 aa20.87■□□□□ 0.93
COMMD3-208ENST00000470045 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
COMMD3-208ENST00000470045 PTCH1Q13635 1447 aa20.86■□□□□ 0.93
COMMD3-208ENST00000470045 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
COMMD3-208ENST00000470045 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
COMMD3-208ENST00000470045 MAPK8IP2Q13387 824 aaPredicted RBP20.83■□□□□ 0.93
COMMD3-208ENST00000470045 SLAIN2Q9P270 581 aa20.83■□□□□ 0.93
COMMD3-208ENST00000470045 ADGRL3Q9HAR2 1447 aa20.82■□□□□ 0.92
COMMD3-208ENST00000470045 PHLPP1O60346 1717 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 ADGRF5Q8IZF2 1346 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 PIK3C2GO75747 1445 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 CACNB1Q02641 598 aaPredicted RBP20.81■□□□□ 0.92
COMMD3-208ENST00000470045 C14orf37Q86TY3 774 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 CADPS2Q86UW7 1296 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 MYOM2P54296 1465 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
COMMD3-208ENST00000470045 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
COMMD3-208ENST00000470045 RGL3Q3MIN7 710 aa20.8■□□□□ 0.92
COMMD3-208ENST00000470045 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
COMMD3-208ENST00000470045 KNDC1Q76NI1 1749 aa20.79■□□□□ 0.92
COMMD3-208ENST00000470045 LAMC1P11047 1609 aa20.78■□□□□ 0.92
COMMD3-208ENST00000470045 AHDC1Q5TGY3 1603 aaPredicted RBP20.78■□□□□ 0.92
COMMD3-208ENST00000470045 ROBO2Q9HCK4 1378 aa20.77■□□□□ 0.92
COMMD3-208ENST00000470045 ATF3P18847 181 aa20.77■□□□□ 0.92
COMMD3-208ENST00000470045 MST1RQ04912 1400 aa20.77■□□□□ 0.91
COMMD3-208ENST00000470045 TECPR2O15040 1411 aa20.76■□□□□ 0.91
COMMD3-208ENST00000470045 ILDR2Q71H61 639 aa20.73■□□□□ 0.91
COMMD3-208ENST00000470045 NHSL1Q5SYE7 1610 aa20.73■□□□□ 0.91
COMMD3-208ENST00000470045 CDC42BPGQ6DT37 1551 aa20.71■□□□□ 0.91
COMMD3-208ENST00000470045 LRPPRCP42704 1394 aaKnown RBP20.71■□□□□ 0.91
COMMD3-208ENST00000470045 BRINP3Q76B58 766 aa20.7■□□□□ 0.9
COMMD3-208ENST00000470045 SHPRHQ149N8 1683 aa20.69■□□□□ 0.9
COMMD3-208ENST00000470045 ABCC11Q96J66 1382 aa20.69■□□□□ 0.9
COMMD3-208ENST00000470045 C14orf93Q9H972 538 aaKnown RBP20.67■□□□□ 0.9
COMMD3-208ENST00000470045 YTHDC2Q9H6S0 1430 aaKnown RBP20.67■□□□□ 0.9
COMMD3-208ENST00000470045 JCADQ9P266 1359 aa20.66■□□□□ 0.9
COMMD3-208ENST00000470045 C1orf167Q5SNV9 1468 aa20.66■□□□□ 0.9
COMMD3-208ENST00000470045 ADGRB1O14514 1584 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms