RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
PTMA-211ENST00000468027 NRXN3Q9Y4C0 1643 aa19.49■□□□□ 0.71
PTMA-211ENST00000468027 RAB3GAP2Q9H2M9 1393 aa19.48■□□□□ 0.71
PTMA-211ENST00000468027 PPLO60437 1756 aa19.48■□□□□ 0.71
PTMA-211ENST00000468027 EID1Q9Y6B2 187 aa19.48■□□□□ 0.71
PTMA-211ENST00000468027 NEXMIFQ5QGS0 1516 aa19.47■□□□□ 0.71
PTMA-211ENST00000468027 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
PTMA-211ENST00000468027 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
PTMA-211ENST00000468027 NWD1Q149M9 1564 aa19.46■□□□□ 0.71
PTMA-211ENST00000468027 PLEKHG1Q9ULL1 1385 aa19.45■□□□□ 0.7
PTMA-211ENST00000468027 ALKQ9UM73 1620 aa19.45■□□□□ 0.7
PTMA-211ENST00000468027 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
PTMA-211ENST00000468027 LRRC7Q96NW7 1537 aa19.44■□□□□ 0.7
PTMA-211ENST00000468027 SETD1AO15047 1707 aaKnown RBP19.43■□□□□ 0.7
PTMA-211ENST00000468027 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
PTMA-211ENST00000468027 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
PTMA-211ENST00000468027 DIP2AQ14689 1571 aa19.42■□□□□ 0.7
PTMA-211ENST00000468027 SETBP1Q9Y6X0 1596 aa19.42■□□□□ 0.7
PTMA-211ENST00000468027 FOXD1Q16676 465 aa19.42■□□□□ 0.7
PTMA-211ENST00000468027 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
PTMA-211ENST00000468027 HRCP23327 699 aa19.4■□□□□ 0.7
PTMA-211ENST00000468027 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
PTMA-211ENST00000468027 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
PTMA-211ENST00000468027 SPATA31E1Q6ZUB1 1445 aa19.36■□□□□ 0.69
PTMA-211ENST00000468027 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
PTMA-211ENST00000468027 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
PTMA-211ENST00000468027 XRN1Q8IZH2 1706 aaKnown RBP19.35■□□□□ 0.69
PTMA-211ENST00000468027 TBX22Q9Y458 520 aa19.34■□□□□ 0.69
PTMA-211ENST00000468027 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
PTMA-211ENST00000468027 KCNA6P17658 529 aa19.33■□□□□ 0.68
PTMA-211ENST00000468027 CCDC144AA2RUR9 1427 aa19.32■□□□□ 0.68
PTMA-211ENST00000468027 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
PTMA-211ENST00000468027 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
PTMA-211ENST00000468027 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
PTMA-211ENST00000468027 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
PTMA-211ENST00000468027 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
PTMA-211ENST00000468027 RPGRIP1LQ68CZ1 1315 aa19.28■□□□□ 0.68
PTMA-211ENST00000468027 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
PTMA-211ENST00000468027 TMEM94Q12767 1356 aa19.25■□□□□ 0.67
PTMA-211ENST00000468027 METP08581 1390 aa19.24■□□□□ 0.67
PTMA-211ENST00000468027 UBAP1LF5GYI3 381 aa19.24■□□□□ 0.67
PTMA-211ENST00000468027 BCANQ96GW7 911 aa19.24■□□□□ 0.67
PTMA-211ENST00000468027 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
PTMA-211ENST00000468027 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
PTMA-211ENST00000468027 NRXN1Q9ULB1 1477 aa19.22■□□□□ 0.67
PTMA-211ENST00000468027 PRAG1Q86YV5 1406 aa19.2■□□□□ 0.66
PTMA-211ENST00000468027 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
PTMA-211ENST00000468027 NALCNQ8IZF0 1738 aa19.2■□□□□ 0.66
PTMA-211ENST00000468027 TOM1O60784 492 aa19.19■□□□□ 0.66
PTMA-211ENST00000468027 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
PTMA-211ENST00000468027 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
PTMA-211ENST00000468027 KNDC1Q76NI1 1749 aa19.19■□□□□ 0.66
PTMA-211ENST00000468027 ASXL1Q8IXJ9 1541 aa19.19■□□□□ 0.66
PTMA-211ENST00000468027 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
PTMA-211ENST00000468027 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
PTMA-211ENST00000468027 MYOM2P54296 1465 aa19.18■□□□□ 0.66
PTMA-211ENST00000468027 AMOTL2Q9Y2J4 779 aa19.18■□□□□ 0.66
PTMA-211ENST00000468027 RGL3Q3MIN7 710 aa19.17■□□□□ 0.66
PTMA-211ENST00000468027 ROBO1Q9Y6N7 1651 aa19.17■□□□□ 0.66
PTMA-211ENST00000468027 LAMC1P11047 1609 aa19.16■□□□□ 0.66
PTMA-211ENST00000468027 PTCH1Q13635 1447 aa19.12■□□□□ 0.65
PTMA-211ENST00000468027 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
PTMA-211ENST00000468027 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
PTMA-211ENST00000468027 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
PTMA-211ENST00000468027 MSH6P52701 1360 aa19.1■□□□□ 0.65
PTMA-211ENST00000468027 TECPR2O15040 1411 aa19.09■□□□□ 0.65
PTMA-211ENST00000468027 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
PTMA-211ENST00000468027 HSPA1LP34931 641 aa19.08■□□□□ 0.64
PTMA-211ENST00000468027 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
PTMA-211ENST00000468027 DCCP43146 1447 aa19.08■□□□□ 0.64
PTMA-211ENST00000468027 ADGRL3Q9HAR2 1447 aa19.07■□□□□ 0.64
PTMA-211ENST00000468027 ADGRB1O14514 1584 aa19.06■□□□□ 0.64
PTMA-211ENST00000468027 KIAA1210Q9ULL0 1709 aa19.06■□□□□ 0.64
PTMA-211ENST00000468027 C19orf44Q9H6X5 657 aa19.06■□□□□ 0.64
PTMA-211ENST00000468027 C14orf93Q9H972 538 aaKnown RBP19.06■□□□□ 0.64
PTMA-211ENST00000468027 PHLPP1O60346 1717 aa19.04■□□□□ 0.64
PTMA-211ENST00000468027 LRPPRCP42704 1394 aaKnown RBP19.04■□□□□ 0.64
PTMA-211ENST00000468027 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
PTMA-211ENST00000468027 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
PTMA-211ENST00000468027 ABCC11Q96J66 1382 aa19.03■□□□□ 0.64
PTMA-211ENST00000468027 NHSL1Q5SYE7 1610 aa19.03■□□□□ 0.64
PTMA-211ENST00000468027 MST1RQ04912 1400 aa19.02■□□□□ 0.64
PTMA-211ENST00000468027 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
PTMA-211ENST00000468027 COL16A1Q07092 1604 aaPredicted RBP19.01■□□□□ 0.63
PTMA-211ENST00000468027 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
PTMA-211ENST00000468027 TMEM132EQ6IEE7 984 aa19.01■□□□□ 0.63
PTMA-211ENST00000468027 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
PTMA-211ENST00000468027 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
PTMA-211ENST00000468027 STAC3Q96MF2 364 aa19■□□□□ 0.63
PTMA-211ENST00000468027 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
PTMA-211ENST00000468027 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
PTMA-211ENST00000468027 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
PTMA-211ENST00000468027 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
PTMA-211ENST00000468027 FMN2Q9NZ56 1722 aa18.99■□□□□ 0.63
PTMA-211ENST00000468027 DLC1Q96QB1 1528 aa18.99■□□□□ 0.63
PTMA-211ENST00000468027 PLEKHH1Q9ULM0 1364 aa18.96■□□□□ 0.63
PTMA-211ENST00000468027 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
PTMA-211ENST00000468027 SIRT1Q96EB6 747 aa18.96■□□□□ 0.63
PTMA-211ENST00000468027 MED1Q15648 1581 aaPredicted RBP18.95■□□□□ 0.62
PTMA-211ENST00000468027 ATF3P18847 181 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms