RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.01■■■■□ 3.03
SSR2-204ENST00000467041 TRIM52Q96A61 297 aa34.01■■■■□ 3.03
SSR2-204ENST00000467041 BCANQ96GW7 911 aa34.01■■■■□ 3.03
SSR2-204ENST00000467041 PLEKHG1Q9ULL1 1385 aa34■■■■□ 3.03
SSR2-204ENST00000467041 PPP1R15AO75807 674 aaPredicted RBP34■■■■□ 3.03
SSR2-204ENST00000467041 SPHKAPQ2M3C7 1700 aa33.99■■■■□ 3.03
SSR2-204ENST00000467041 KCNA6P17658 529 aa33.98■■■■□ 3.03
SSR2-204ENST00000467041 PIP4K2BP78356 416 aa33.94■■■■□ 3.02
SSR2-204ENST00000467041 SENP3Q9H4L4 574 aaPredicted RBP33.93■■■■□ 3.02
SSR2-204ENST00000467041 NUTM2DQ5VT03 806 aaPredicted RBP33.92■■■■□ 3.02
SSR2-204ENST00000467041 SCAF1Q9H7N4 1312 aaKnown RBP33.92■■■■□ 3.02
SSR2-204ENST00000467041 SLC4A1APQ9BWU0 796 aaKnown RBP33.9■■■■□ 3.02
SSR2-204ENST00000467041 ALKQ9UM73 1620 aa33.9■■■■□ 3.02
SSR2-204ENST00000467041 TBX22Q9Y458 520 aa33.89■■■■□ 3.02
SSR2-204ENST00000467041 TRPM2O94759 1503 aa33.88■■■■□ 3.01
SSR2-204ENST00000467041 XIRP1Q702N8 1843 aaKnown RBP33.85■■■■□ 3.01
SSR2-204ENST00000467041 TMEM94Q12767 1356 aa33.85■■■■□ 3.01
SSR2-204ENST00000467041 CLTCL1P53675 1640 aa33.84■■■■□ 3.01
SSR2-204ENST00000467041 PROSER2Q86WR7 435 aaPredicted RBP33.84■■■■□ 3.01
SSR2-204ENST00000467041 NWD1Q149M9 1564 aa33.84■■■■□ 3.01
SSR2-204ENST00000467041 ZNF326Q5BKZ1 582 aaKnown RBP33.83■■■■□ 3.01
SSR2-204ENST00000467041 ADAMTS13Q76LX8 1427 aa33.83■■■■□ 3.01
SSR2-204ENST00000467041 NKTRP30414 1462 aaKnown RBP33.82■■■■□ 3
SSR2-204ENST00000467041 HSPA1LP34931 641 aa33.81■■■■□ 3
SSR2-204ENST00000467041 CHD2O14647 1828 aaKnown RBP33.79■■■■□ 3
SSR2-204ENST00000467041 RBM33Q96EV2 1170 aaKnown RBP33.77■■■■□ 3
SSR2-204ENST00000467041 DIP2AQ14689 1571 aa33.77■■■■□ 3
SSR2-204ENST00000467041 PIK3R4Q99570 1358 aa33.75■■■□□ 2.99
SSR2-204ENST00000467041 KIF1BO60333 1816 aa33.74■■■□□ 2.99
SSR2-204ENST00000467041 MPHOSPH9Q99550 1183 aa33.73■■■□□ 2.99
SSR2-204ENST00000467041 FOXD1Q16676 465 aa33.72■■■□□ 2.99
SSR2-204ENST00000467041 ACIN1Q9UKV3 1341 aaKnown RBP33.72■■■□□ 2.99
SSR2-204ENST00000467041 SETD5Q9C0A6 1442 aa33.71■■■□□ 2.99
SSR2-204ENST00000467041 NEXMIFQ5QGS0 1516 aa33.69■■■□□ 2.98
SSR2-204ENST00000467041 DISP3Q9P2K9 1392 aa33.68■■■□□ 2.98
SSR2-204ENST00000467041 SETBP1Q9Y6X0 1596 aa33.68■■■□□ 2.98
SSR2-204ENST00000467041 NRXN3Q9Y4C0 1643 aa33.66■■■□□ 2.98
SSR2-204ENST00000467041 MSH6P52701 1360 aa33.64■■■□□ 2.98
SSR2-204ENST00000467041 AMOTL2Q9Y2J4 779 aa33.64■■■□□ 2.98
SSR2-204ENST00000467041 NCOA3Q9Y6Q9 1424 aa33.63■■■□□ 2.97
SSR2-204ENST00000467041 PTPRUQ92729 1446 aa33.62■■■□□ 2.97
SSR2-204ENST00000467041 RPGRIP1LQ68CZ1 1315 aa33.62■■■□□ 2.97
SSR2-204ENST00000467041 FAM135BQ49AJ0 1406 aa33.62■■■□□ 2.97
SSR2-204ENST00000467041 VGFO15240 615 aaPredicted RBP33.61■■■□□ 2.97
SSR2-204ENST00000467041 CCDC144AA2RUR9 1427 aa33.58■■■□□ 2.97
SSR2-204ENST00000467041 RAB3GAP2Q9H2M9 1393 aa33.58■■■□□ 2.97
SSR2-204ENST00000467041 METP08581 1390 aa33.57■■■□□ 2.96
SSR2-204ENST00000467041 C14orf37Q86TY3 774 aa33.54■■■□□ 2.96
SSR2-204ENST00000467041 SLAIN2Q9P270 581 aa33.54■■■□□ 2.96
SSR2-204ENST00000467041 C19orf44Q9H6X5 657 aa33.52■■■□□ 2.96
SSR2-204ENST00000467041 XRN1Q8IZH2 1706 aaKnown RBP33.51■■■□□ 2.96
SSR2-204ENST00000467041 SPATA31E1Q6ZUB1 1445 aa33.49■■■□□ 2.95
SSR2-204ENST00000467041 PPLO60437 1756 aa33.49■■■□□ 2.95
SSR2-204ENST00000467041 RGL3Q3MIN7 710 aa33.47■■■□□ 2.95
SSR2-204ENST00000467041 ROBO1Q9Y6N7 1651 aa33.47■■■□□ 2.95
SSR2-204ENST00000467041 CADPS2Q86UW7 1296 aa33.46■■■□□ 2.95
SSR2-204ENST00000467041 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.45■■■□□ 2.94
SSR2-204ENST00000467041 ATF3P18847 181 aa33.44■■■□□ 2.94
SSR2-204ENST00000467041 HRCP23327 699 aa33.44■■■□□ 2.94
SSR2-204ENST00000467041 ILDR2Q71H61 639 aa33.42■■■□□ 2.94
SSR2-204ENST00000467041 MED1Q15648 1581 aaPredicted RBP33.41■■■□□ 2.94
SSR2-204ENST00000467041 SETD1AO15047 1707 aaKnown RBP33.4■■■□□ 2.94
SSR2-204ENST00000467041 ANKRD30BQ9BXX2 1392 aa33.39■■■□□ 2.94
SSR2-204ENST00000467041 ADGRF5Q8IZF2 1346 aa33.39■■■□□ 2.94
SSR2-204ENST00000467041 DCCP43146 1447 aa33.36■■■□□ 2.93
SSR2-204ENST00000467041 IFT172Q9UG01 1749 aa33.33■■■□□ 2.93
SSR2-204ENST00000467041 PTCH1Q13635 1447 aa33.32■■■□□ 2.92
SSR2-204ENST00000467041 PRAG1Q86YV5 1406 aa33.31■■■□□ 2.92
SSR2-204ENST00000467041 ADGRL3Q9HAR2 1447 aa33.3■■■□□ 2.92
SSR2-204ENST00000467041 ROBO2Q9HCK4 1378 aa33.3■■■□□ 2.92
SSR2-204ENST00000467041 PHLPP1O60346 1717 aa33.26■■■□□ 2.92
SSR2-204ENST00000467041 PIK3C2GO75747 1445 aa33.25■■■□□ 2.91
SSR2-204ENST00000467041 MST1RQ04912 1400 aa33.25■■■□□ 2.91
SSR2-204ENST00000467041 BRINP3Q76B58 766 aa33.24■■■□□ 2.91
SSR2-204ENST00000467041 NALCNQ8IZF0 1738 aa33.23■■■□□ 2.91
SSR2-204ENST00000467041 PHF23Q9BUL5 403 aaPredicted RBP33.23■■■□□ 2.91
SSR2-204ENST00000467041 COL16A1Q07092 1604 aaPredicted RBP33.19■■■□□ 2.9
SSR2-204ENST00000467041 AHDC1Q5TGY3 1603 aaPredicted RBP33.19■■■□□ 2.9
SSR2-204ENST00000467041 JCADQ9P266 1359 aa33.19■■■□□ 2.9
SSR2-204ENST00000467041 TMEM132EQ6IEE7 984 aa33.18■■■□□ 2.9
SSR2-204ENST00000467041 C14orf93Q9H972 538 aaKnown RBP33.18■■■□□ 2.9
SSR2-204ENST00000467041 LRPPRCP42704 1394 aaKnown RBP33.18■■■□□ 2.9
SSR2-204ENST00000467041 MYOM2P54296 1465 aa33.18■■■□□ 2.9
SSR2-204ENST00000467041 NRXN1Q9ULB1 1477 aa33.18■■■□□ 2.9
SSR2-204ENST00000467041 STK26Q9P289 416 aa33.17■■■□□ 2.9
SSR2-204ENST00000467041 TECPR2O15040 1411 aa33.16■■■□□ 2.9
SSR2-204ENST00000467041 ASXL1Q8IXJ9 1541 aa33.15■■■□□ 2.9
SSR2-204ENST00000467041 ABCC11Q96J66 1382 aa33.15■■■□□ 2.9
SSR2-204ENST00000467041 SOCS7O14512 581 aa33.13■■■□□ 2.89
SSR2-204ENST00000467041 CFAP70Q5T0N1 1121 aa33.11■■■□□ 2.89
SSR2-204ENST00000467041 C1orf167Q5SNV9 1468 aa33.1■■■□□ 2.89
SSR2-204ENST00000467041 YTHDC2Q9H6S0 1430 aaKnown RBP33.1■■■□□ 2.89
SSR2-204ENST00000467041 WAPLQ7Z5K2 1190 aa33.09■■■□□ 2.89
SSR2-204ENST00000467041 RGS17Q9UGC6 210 aaPredicted RBP33.07■■■□□ 2.88
SSR2-204ENST00000467041 KNDC1Q76NI1 1749 aa33.06■■■□□ 2.88
SSR2-204ENST00000467041 SIRT1Q96EB6 747 aa33.06■■■□□ 2.88
SSR2-204ENST00000467041 DCAF11Q8TEB1 546 aa33.05■■■□□ 2.88
SSR2-204ENST00000467041 LAMC1P11047 1609 aa33.05■■■□□ 2.88
SSR2-204ENST00000467041 DHX57Q6P158 1386 aaKnown RBP33.05■■■□□ 2.88
SSR2-204ENST00000467041 NHSL1Q5SYE7 1610 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms