RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 PLEKHG1Q9ULL1 1385 aa37.93■■■■□ 3.66
SDF2L1-202ENST00000466935 XIRP1Q702N8 1843 aaKnown RBP37.91■■■■□ 3.66
SDF2L1-202ENST00000466935 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.9■■■■□ 3.66
SDF2L1-202ENST00000466935 KCNA6P17658 529 aa37.89■■■■□ 3.66
SDF2L1-202ENST00000466935 NWD1Q149M9 1564 aa37.89■■■■□ 3.66
SDF2L1-202ENST00000466935 SLC26A8Q96RN1 970 aa37.88■■■■□ 3.65
SDF2L1-202ENST00000466935 PIP4K2BP78356 416 aa37.86■■■■□ 3.65
SDF2L1-202ENST00000466935 NKTRP30414 1462 aaKnown RBP37.85■■■■□ 3.65
SDF2L1-202ENST00000466935 PPP1R15AO75807 674 aaPredicted RBP37.85■■■■□ 3.65
SDF2L1-202ENST00000466935 CHGAP10645 457 aaKnown RBP37.85■■■■□ 3.65
SDF2L1-202ENST00000466935 SCAF1Q9H7N4 1312 aaKnown RBP37.85■■■■□ 3.65
SDF2L1-202ENST00000466935 BCANQ96GW7 911 aa37.81■■■■□ 3.64
SDF2L1-202ENST00000466935 DIP2AQ14689 1571 aa37.8■■■■□ 3.64
SDF2L1-202ENST00000466935 CHD2O14647 1828 aaKnown RBP37.8■■■■□ 3.64
SDF2L1-202ENST00000466935 TRPM2O94759 1503 aa37.78■■■■□ 3.64
SDF2L1-202ENST00000466935 TBX22Q9Y458 520 aa37.77■■■■□ 3.64
SDF2L1-202ENST00000466935 DISP3Q9P2K9 1392 aa37.77■■■■□ 3.64
SDF2L1-202ENST00000466935 HSPA1LP34931 641 aa37.76■■■■□ 3.64
SDF2L1-202ENST00000466935 TMEM94Q12767 1356 aa37.76■■■■□ 3.64
SDF2L1-202ENST00000466935 CLTCL1P53675 1640 aa37.72■■■■□ 3.63
SDF2L1-202ENST00000466935 ADAMTS13Q76LX8 1427 aa37.71■■■■□ 3.63
SDF2L1-202ENST00000466935 PROSER2Q86WR7 435 aaPredicted RBP37.71■■■■□ 3.63
SDF2L1-202ENST00000466935 PIK3R4Q99570 1358 aa37.7■■■■□ 3.63
SDF2L1-202ENST00000466935 KIF1BO60333 1816 aa37.68■■■■□ 3.62
SDF2L1-202ENST00000466935 TRIM52Q96A61 297 aa37.67■■■■□ 3.62
SDF2L1-202ENST00000466935 NUTM2DQ5VT03 806 aaPredicted RBP37.63■■■■□ 3.61
SDF2L1-202ENST00000466935 SETBP1Q9Y6X0 1596 aa37.63■■■■□ 3.61
SDF2L1-202ENST00000466935 NCOA3Q9Y6Q9 1424 aa37.61■■■■□ 3.61
SDF2L1-202ENST00000466935 SLC4A1APQ9BWU0 796 aaKnown RBP37.61■■■■□ 3.61
SDF2L1-202ENST00000466935 SENP3Q9H4L4 574 aaPredicted RBP37.61■■■■□ 3.61
SDF2L1-202ENST00000466935 FAM135BQ49AJ0 1406 aa37.6■■■■□ 3.61
SDF2L1-202ENST00000466935 NRXN3Q9Y4C0 1643 aa37.59■■■■□ 3.61
SDF2L1-202ENST00000466935 NEXMIFQ5QGS0 1516 aa37.58■■■■□ 3.61
SDF2L1-202ENST00000466935 ZNF326Q5BKZ1 582 aaKnown RBP37.58■■■■□ 3.61
SDF2L1-202ENST00000466935 MSH6P52701 1360 aa37.57■■■■□ 3.61
SDF2L1-202ENST00000466935 ACIN1Q9UKV3 1341 aaKnown RBP37.54■■■■□ 3.6
SDF2L1-202ENST00000466935 MED1Q15648 1581 aaPredicted RBP37.51■■■■□ 3.6
SDF2L1-202ENST00000466935 RBM33Q96EV2 1170 aaKnown RBP37.51■■■■□ 3.6
SDF2L1-202ENST00000466935 ROBO1Q9Y6N7 1651 aa37.48■■■■□ 3.59
SDF2L1-202ENST00000466935 XRN1Q8IZH2 1706 aaKnown RBP37.47■■■■□ 3.59
SDF2L1-202ENST00000466935 PTPRUQ92729 1446 aa37.45■■■■□ 3.59
SDF2L1-202ENST00000466935 AMOTL2Q9Y2J4 779 aa37.44■■■■□ 3.58
SDF2L1-202ENST00000466935 RPGRIP1LQ68CZ1 1315 aa37.43■■■■□ 3.58
SDF2L1-202ENST00000466935 ILDR2Q71H61 639 aa37.43■■■■□ 3.58
SDF2L1-202ENST00000466935 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.39■■■■□ 3.58
SDF2L1-202ENST00000466935 VGFO15240 615 aaPredicted RBP37.39■■■■□ 3.58
SDF2L1-202ENST00000466935 SLAIN2Q9P270 581 aa37.39■■■■□ 3.58
SDF2L1-202ENST00000466935 SETD5Q9C0A6 1442 aa37.38■■■■□ 3.57
SDF2L1-202ENST00000466935 PPLO60437 1756 aa37.38■■■■□ 3.57
SDF2L1-202ENST00000466935 MPHOSPH9Q99550 1183 aa37.38■■■■□ 3.57
SDF2L1-202ENST00000466935 C19orf44Q9H6X5 657 aa37.37■■■■□ 3.57
SDF2L1-202ENST00000466935 METP08581 1390 aa37.37■■■■□ 3.57
SDF2L1-202ENST00000466935 C14orf37Q86TY3 774 aa37.36■■■■□ 3.57
SDF2L1-202ENST00000466935 CCDC144AA2RUR9 1427 aa37.36■■■■□ 3.57
SDF2L1-202ENST00000466935 CADPS2Q86UW7 1296 aa37.34■■■■□ 3.57
SDF2L1-202ENST00000466935 DCCP43146 1447 aa37.33■■■■□ 3.57
SDF2L1-202ENST00000466935 SETD1AO15047 1707 aaKnown RBP37.33■■■■□ 3.57
SDF2L1-202ENST00000466935 FOXD1Q16676 465 aa37.32■■■■□ 3.56
SDF2L1-202ENST00000466935 ATF3P18847 181 aa37.28■■■■□ 3.56
SDF2L1-202ENST00000466935 SPATA31E1Q6ZUB1 1445 aa37.26■■■■□ 3.55
SDF2L1-202ENST00000466935 PHLPP1O60346 1717 aa37.25■■■■□ 3.55
SDF2L1-202ENST00000466935 PRAG1Q86YV5 1406 aa37.24■■■■□ 3.55
SDF2L1-202ENST00000466935 IFT172Q9UG01 1749 aa37.22■■■■□ 3.55
SDF2L1-202ENST00000466935 PTCH1Q13635 1447 aa37.21■■■■□ 3.55
SDF2L1-202ENST00000466935 RAB3GAP2Q9H2M9 1393 aa37.21■■■■□ 3.55
SDF2L1-202ENST00000466935 SOCS7O14512 581 aa37.21■■■■□ 3.55
SDF2L1-202ENST00000466935 ADGRL3Q9HAR2 1447 aa37.19■■■■□ 3.54
SDF2L1-202ENST00000466935 ANKRD30BQ9BXX2 1392 aa37.19■■■■□ 3.54
SDF2L1-202ENST00000466935 PHF23Q9BUL5 403 aaPredicted RBP37.18■■■■□ 3.54
SDF2L1-202ENST00000466935 AHDC1Q5TGY3 1603 aaPredicted RBP37.18■■■■□ 3.54
SDF2L1-202ENST00000466935 COL16A1Q07092 1604 aaPredicted RBP37.16■■■■□ 3.54
SDF2L1-202ENST00000466935 NALCNQ8IZF0 1738 aa37.16■■■■□ 3.54
SDF2L1-202ENST00000466935 JCADQ9P266 1359 aa37.11■■■■□ 3.53
SDF2L1-202ENST00000466935 MST1RQ04912 1400 aa37.1■■■■□ 3.53
SDF2L1-202ENST00000466935 RGL3Q3MIN7 710 aa37.1■■■■□ 3.53
SDF2L1-202ENST00000466935 HRCP23327 699 aa37.08■■■■□ 3.53
SDF2L1-202ENST00000466935 ADGRF5Q8IZF2 1346 aa37.08■■■■□ 3.53
SDF2L1-202ENST00000466935 ROBO2Q9HCK4 1378 aa37.07■■■■□ 3.53
SDF2L1-202ENST00000466935 BRINP3Q76B58 766 aa37.06■■■■□ 3.52
SDF2L1-202ENST00000466935 ASXL1Q8IXJ9 1541 aa37.05■■■■□ 3.52
SDF2L1-202ENST00000466935 PIK3C2GO75747 1445 aa37.03■■■■□ 3.52
SDF2L1-202ENST00000466935 NHSL1Q5SYE7 1610 aa37.01■■■■□ 3.52
SDF2L1-202ENST00000466935 SHPRHQ149N8 1683 aa37■■■■□ 3.51
SDF2L1-202ENST00000466935 TECPR2O15040 1411 aa36.99■■■■□ 3.51
SDF2L1-202ENST00000466935 MYOM2P54296 1465 aa36.98■■■■□ 3.51
SDF2L1-202ENST00000466935 KNDC1Q76NI1 1749 aa36.97■■■■□ 3.51
SDF2L1-202ENST00000466935 NRXN1Q9ULB1 1477 aa36.96■■■■□ 3.51
SDF2L1-202ENST00000466935 LRPPRCP42704 1394 aaKnown RBP36.95■■■■□ 3.51
SDF2L1-202ENST00000466935 SPATA31A6Q5VVP1 1343 aa36.95■■■■□ 3.51
SDF2L1-202ENST00000466935 LAMC1P11047 1609 aa36.94■■■■□ 3.5
SDF2L1-202ENST00000466935 RGS17Q9UGC6 210 aaPredicted RBP36.93■■■■□ 3.5
SDF2L1-202ENST00000466935 C1orf167Q5SNV9 1468 aa36.93■■■■□ 3.5
SDF2L1-202ENST00000466935 ABCC11Q96J66 1382 aa36.91■■■■□ 3.5
SDF2L1-202ENST00000466935 CDC42BPGQ6DT37 1551 aa36.91■■■■□ 3.5
SDF2L1-202ENST00000466935 C14orf93Q9H972 538 aaKnown RBP36.86■■■■□ 3.49
SDF2L1-202ENST00000466935 YTHDC2Q9H6S0 1430 aaKnown RBP36.85■■■■□ 3.49
SDF2L1-202ENST00000466935 LRP6O75581 1613 aa36.82■■■■□ 3.49
SDF2L1-202ENST00000466935 TMEM132EQ6IEE7 984 aa36.82■■■■□ 3.48
SDF2L1-202ENST00000466935 LRRC59Q96AG4 307 aaKnown RBP36.81■■■■□ 3.48
SDF2L1-202ENST00000466935 STK26Q9P289 416 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms