RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
CLCNKA-204ENST00000464764 WDR7Q9Y4E6 1490 aa16.29■□□□□ 0.2
CLCNKA-204ENST00000464764 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
CLCNKA-204ENST00000464764 CCDC141Q6ZP82 1450 aa16.25■□□□□ 0.19
CLCNKA-204ENST00000464764 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
CLCNKA-204ENST00000464764 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
CLCNKA-204ENST00000464764 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
CLCNKA-204ENST00000464764 ABCA8O94911 1581 aa16.24■□□□□ 0.19
CLCNKA-204ENST00000464764 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-204ENST00000464764 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
CLCNKA-204ENST00000464764 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-204ENST00000464764 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-204ENST00000464764 NKTRP30414 1462 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-204ENST00000464764 CLUAP1Q96AJ1 413 aa16.21■□□□□ 0.19
CLCNKA-204ENST00000464764 E9PSI1 815 aa16.2■□□□□ 0.18
CLCNKA-204ENST00000464764 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
CLCNKA-204ENST00000464764 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
CLCNKA-204ENST00000464764 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
CLCNKA-204ENST00000464764 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
CLCNKA-204ENST00000464764 RRAGDQ9NQL2 400 aaPredicted RBP16.19■□□□□ 0.18
CLCNKA-204ENST00000464764 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
CLCNKA-204ENST00000464764 SYCP2Q9BX26 1530 aa16.19■□□□□ 0.18
CLCNKA-204ENST00000464764 RSPH4AQ5TD94 716 aa16.19■□□□□ 0.18
CLCNKA-204ENST00000464764 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
CLCNKA-204ENST00000464764 CENPJQ9HC77 1338 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-204ENST00000464764 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
CLCNKA-204ENST00000464764 RLBP1P12271 317 aa16.17■□□□□ 0.18
CLCNKA-204ENST00000464764 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
CLCNKA-204ENST00000464764 BECN1Q14457 450 aa16.16■□□□□ 0.18
CLCNKA-204ENST00000464764 GZF1Q9H116 711 aaPredicted RBP16.16■□□□□ 0.18
CLCNKA-204ENST00000464764 ANTXR1Q9H6X2 564 aa16.16■□□□□ 0.18
CLCNKA-204ENST00000464764 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
CLCNKA-204ENST00000464764 CGNL1Q0VF96 1302 aa16.16■□□□□ 0.18
CLCNKA-204ENST00000464764 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
CLCNKA-204ENST00000464764 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
CLCNKA-204ENST00000464764 UBE2Q2Q8WVN8 375 aa16.15■□□□□ 0.18
CLCNKA-204ENST00000464764 TBC1D2Q9BYX2 928 aa16.15■□□□□ 0.18
CLCNKA-204ENST00000464764 PIK3C2GO75747 1445 aa16.15■□□□□ 0.18
CLCNKA-204ENST00000464764 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.18
CLCNKA-204ENST00000464764 NUP160Q12769 1436 aa16.14■□□□□ 0.17
CLCNKA-204ENST00000464764 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
CLCNKA-204ENST00000464764 LAMC1P11047 1609 aa16.14■□□□□ 0.17
CLCNKA-204ENST00000464764 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
CLCNKA-204ENST00000464764 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
CLCNKA-204ENST00000464764 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
CLCNKA-204ENST00000464764 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
CLCNKA-204ENST00000464764 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
CLCNKA-204ENST00000464764 EIF2AK4Q9P2K8 1649 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-204ENST00000464764 NLRP1Q9C000 1473 aa16.11■□□□□ 0.17
CLCNKA-204ENST00000464764 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-204ENST00000464764 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
CLCNKA-204ENST00000464764 UNC13BO14795 1591 aa16.1■□□□□ 0.17
CLCNKA-204ENST00000464764 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
CLCNKA-204ENST00000464764 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLCNKA-204ENST00000464764 SCAF11Q99590 1463 aaKnown RBP16.09■□□□□ 0.17
CLCNKA-204ENST00000464764 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
CLCNKA-204ENST00000464764 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
CLCNKA-204ENST00000464764 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-204ENST00000464764 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
CLCNKA-204ENST00000464764 ATP10AO60312 1499 aa16.07■□□□□ 0.16
CLCNKA-204ENST00000464764 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
CLCNKA-204ENST00000464764 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
CLCNKA-204ENST00000464764 TTC37Q6PGP7 1564 aa16.06■□□□□ 0.16
CLCNKA-204ENST00000464764 ABCC2Q92887 1545 aa16.06■□□□□ 0.16
CLCNKA-204ENST00000464764 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
CLCNKA-204ENST00000464764 SYNMO15061 1565 aa16.05■□□□□ 0.16
CLCNKA-204ENST00000464764 PMFBP1Q8TBY8 1022 aa16.05■□□□□ 0.16
CLCNKA-204ENST00000464764 MFAP1P55081 439 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-204ENST00000464764 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
CLCNKA-204ENST00000464764 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
CLCNKA-204ENST00000464764 MADDQ8WXG6 1647 aa16.04■□□□□ 0.16
CLCNKA-204ENST00000464764 ADGRF5Q8IZF2 1346 aa16.04■□□□□ 0.16
CLCNKA-204ENST00000464764 MCM4P33991 863 aa16.04■□□□□ 0.16
CLCNKA-204ENST00000464764 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
CLCNKA-204ENST00000464764 GOLGA6L3A6NEY3 463 aa16.03■□□□□ 0.16
CLCNKA-204ENST00000464764 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
CLCNKA-204ENST00000464764 SLC12A5Q9H2X9 1139 aa16.03■□□□□ 0.16
CLCNKA-204ENST00000464764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLCNKA-204ENST00000464764 IQGAP1P46940 1657 aa16.02■□□□□ 0.16
CLCNKA-204ENST00000464764 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
CLCNKA-204ENST00000464764 MYOM1P52179 1685 aa16.01■□□□□ 0.15
CLCNKA-204ENST00000464764 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
CLCNKA-204ENST00000464764 RWDD1Q9H446 243 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-204ENST00000464764 TRAPPC8Q9Y2L5 1435 aa16.01■□□□□ 0.15
CLCNKA-204ENST00000464764 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
CLCNKA-204ENST00000464764 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
CLCNKA-204ENST00000464764 ERVK-7P63135 1459 aa16■□□□□ 0.15
CLCNKA-204ENST00000464764 MTHFSP49914 203 aa15.99■□□□□ 0.15
CLCNKA-204ENST00000464764 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-204ENST00000464764 FSD2A1L4K1 749 aa15.99■□□□□ 0.15
CLCNKA-204ENST00000464764 TRAK2O60296 914 aa15.99■□□□□ 0.15
CLCNKA-204ENST00000464764 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
CLCNKA-204ENST00000464764 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
CLCNKA-204ENST00000464764 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
CLCNKA-204ENST00000464764 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-204ENST00000464764 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
CLCNKA-204ENST00000464764 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
CLCNKA-204ENST00000464764 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
CLCNKA-204ENST00000464764 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
CLCNKA-204ENST00000464764 SPAG9O60271 1321 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms