RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 CERKQ8TCT0 537 aa26.15■■□□□ 1.78
UFM1-204ENST00000464423 ACIN1Q9UKV3 1341 aaKnown RBP26.13■■□□□ 1.77
UFM1-204ENST00000464423 HRCP23327 699 aa26.1■■□□□ 1.77
UFM1-204ENST00000464423 PPP1R15AO75807 674 aaPredicted RBP26.09■■□□□ 1.77
UFM1-204ENST00000464423 SLC26A8Q96RN1 970 aa26.09■■□□□ 1.77
UFM1-204ENST00000464423 ZNF326Q5BKZ1 582 aaKnown RBP26.08■■□□□ 1.77
UFM1-204ENST00000464423 BCANQ96GW7 911 aa26.07■■□□□ 1.76
UFM1-204ENST00000464423 HDGFP51858 240 aaKnown RBP26.05■■□□□ 1.76
UFM1-204ENST00000464423 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.05■■□□□ 1.76
UFM1-204ENST00000464423 PLEKHG1Q9ULL1 1385 aa26.05■■□□□ 1.76
UFM1-204ENST00000464423 CCDC144AA2RUR9 1427 aa26.03■■□□□ 1.76
UFM1-204ENST00000464423 ILDR1Q86SU0 546 aaPredicted RBP26.02■■□□□ 1.76
UFM1-204ENST00000464423 KIF1BO60333 1816 aa26.01■■□□□ 1.75
UFM1-204ENST00000464423 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
UFM1-204ENST00000464423 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
UFM1-204ENST00000464423 NEXMIFQ5QGS0 1516 aa25.99■■□□□ 1.75
UFM1-204ENST00000464423 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
UFM1-204ENST00000464423 ANKRD30BQ9BXX2 1392 aa25.96■■□□□ 1.75
UFM1-204ENST00000464423 RGL3Q3MIN7 710 aa25.96■■□□□ 1.75
UFM1-204ENST00000464423 FBXO41Q8TF61 875 aa25.96■■□□□ 1.75
UFM1-204ENST00000464423 CPS1P31327 1500 aa25.96■■□□□ 1.75
UFM1-204ENST00000464423 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
UFM1-204ENST00000464423 TBX22Q9Y458 520 aa25.92■■□□□ 1.74
UFM1-204ENST00000464423 KCNA6P17658 529 aa25.91■■□□□ 1.74
UFM1-204ENST00000464423 LRRC7Q96NW7 1537 aa25.9■■□□□ 1.74
UFM1-204ENST00000464423 NRXN3Q9Y4C0 1643 aa25.9■■□□□ 1.74
UFM1-204ENST00000464423 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.74
UFM1-204ENST00000464423 IQSEC2Q5JU85 1478 aa25.89■■□□□ 1.73
UFM1-204ENST00000464423 SETBP1Q9Y6X0 1596 aa25.87■■□□□ 1.73
UFM1-204ENST00000464423 VGFO15240 615 aaPredicted RBP25.87■■□□□ 1.73
UFM1-204ENST00000464423 RBM33Q96EV2 1170 aaKnown RBP25.87■■□□□ 1.73
UFM1-204ENST00000464423 PPLO60437 1756 aa25.85■■□□□ 1.73
UFM1-204ENST00000464423 DIP2AQ14689 1571 aa25.85■■□□□ 1.73
UFM1-204ENST00000464423 ADGRF5Q8IZF2 1346 aa25.85■■□□□ 1.73
UFM1-204ENST00000464423 NWD1Q149M9 1564 aa25.84■■□□□ 1.73
UFM1-204ENST00000464423 METP08581 1390 aa25.83■■□□□ 1.73
UFM1-204ENST00000464423 PTPRUQ92729 1446 aa25.83■■□□□ 1.73
UFM1-204ENST00000464423 UBAP1LF5GYI3 381 aa25.82■■□□□ 1.72
UFM1-204ENST00000464423 PROSER2Q86WR7 435 aaPredicted RBP25.81■■□□□ 1.72
UFM1-204ENST00000464423 CHD2O14647 1828 aaKnown RBP25.8■■□□□ 1.72
UFM1-204ENST00000464423 TMEM94Q12767 1356 aa25.8■■□□□ 1.72
UFM1-204ENST00000464423 AMOTL2Q9Y2J4 779 aa25.79■■□□□ 1.72
UFM1-204ENST00000464423 IFT172Q9UG01 1749 aa25.79■■□□□ 1.72
UFM1-204ENST00000464423 PIK3R4Q99570 1358 aa25.78■■□□□ 1.72
UFM1-204ENST00000464423 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
UFM1-204ENST00000464423 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
UFM1-204ENST00000464423 ALKQ9UM73 1620 aa25.76■■□□□ 1.71
UFM1-204ENST00000464423 DHX57Q6P158 1386 aaKnown RBP25.74■■□□□ 1.71
UFM1-204ENST00000464423 SETD1AO15047 1707 aaKnown RBP25.73■■□□□ 1.71
UFM1-204ENST00000464423 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
UFM1-204ENST00000464423 PIK3C2GO75747 1445 aa25.71■■□□□ 1.71
UFM1-204ENST00000464423 TOM1O60784 492 aa25.7■■□□□ 1.7
UFM1-204ENST00000464423 KDM2AQ9Y2K7 1162 aa25.7■■□□□ 1.7
UFM1-204ENST00000464423 XRN1Q8IZH2 1706 aaKnown RBP25.7■■□□□ 1.7
UFM1-204ENST00000464423 MYOM2P54296 1465 aa25.69■■□□□ 1.7
UFM1-204ENST00000464423 DCAF11Q8TEB1 546 aa25.69■■□□□ 1.7
UFM1-204ENST00000464423 SIN3AQ96ST3 1273 aa25.69■■□□□ 1.7
UFM1-204ENST00000464423 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
UFM1-204ENST00000464423 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
UFM1-204ENST00000464423 NRXN1Q9ULB1 1477 aa25.67■■□□□ 1.7
UFM1-204ENST00000464423 TMEM132EQ6IEE7 984 aa25.66■■□□□ 1.7
UFM1-204ENST00000464423 CFAP70Q5T0N1 1121 aa25.65■■□□□ 1.7
UFM1-204ENST00000464423 ASXL1Q8IXJ9 1541 aa25.64■■□□□ 1.7
UFM1-204ENST00000464423 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
UFM1-204ENST00000464423 ROBO2Q9HCK4 1378 aa25.62■■□□□ 1.69
UFM1-204ENST00000464423 NEUROD1Q13562 356 aa25.62■■□□□ 1.69
UFM1-204ENST00000464423 C14orf93Q9H972 538 aaKnown RBP25.62■■□□□ 1.69
UFM1-204ENST00000464423 MSH6P52701 1360 aa25.61■■□□□ 1.69
UFM1-204ENST00000464423 STK26Q9P289 416 aa25.61■■□□□ 1.69
UFM1-204ENST00000464423 NCOA3Q9Y6Q9 1424 aa25.59■■□□□ 1.69
UFM1-204ENST00000464423 PTCH1Q13635 1447 aa25.56■■□□□ 1.68
UFM1-204ENST00000464423 C19orf44Q9H6X5 657 aa25.56■■□□□ 1.68
UFM1-204ENST00000464423 LRPPRCP42704 1394 aaKnown RBP25.56■■□□□ 1.68
UFM1-204ENST00000464423 PRAG1Q86YV5 1406 aa25.54■■□□□ 1.68
UFM1-204ENST00000464423 L3MBTL2Q969R5 705 aa25.54■■□□□ 1.68
UFM1-204ENST00000464423 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
UFM1-204ENST00000464423 HSPA1LP34931 641 aa25.53■■□□□ 1.68
UFM1-204ENST00000464423 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.53■■□□□ 1.68
UFM1-204ENST00000464423 WAPLQ7Z5K2 1190 aa25.52■■□□□ 1.68
UFM1-204ENST00000464423 STAC3Q96MF2 364 aa25.52■■□□□ 1.68
UFM1-204ENST00000464423 SLAIN2Q9P270 581 aa25.52■■□□□ 1.68
UFM1-204ENST00000464423 LAMC1P11047 1609 aa25.52■■□□□ 1.68
UFM1-204ENST00000464423 ABCC11Q96J66 1382 aa25.51■■□□□ 1.67
UFM1-204ENST00000464423 TECPR2O15040 1411 aa25.5■■□□□ 1.67
UFM1-204ENST00000464423 ATF3P18847 181 aa25.5■■□□□ 1.67
UFM1-204ENST00000464423 ADGRL3Q9HAR2 1447 aa25.5■■□□□ 1.67
UFM1-204ENST00000464423 PLEKHH1Q9ULM0 1364 aa25.5■■□□□ 1.67
UFM1-204ENST00000464423 ADGRB1O14514 1584 aa25.49■■□□□ 1.67
UFM1-204ENST00000464423 NALCNQ8IZF0 1738 aa25.49■■□□□ 1.67
UFM1-204ENST00000464423 CADPS2Q86UW7 1296 aa25.48■■□□□ 1.67
UFM1-204ENST00000464423 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
UFM1-204ENST00000464423 KNDC1Q76NI1 1749 aa25.44■■□□□ 1.66
UFM1-204ENST00000464423 ROBO1Q9Y6N7 1651 aa25.44■■□□□ 1.66
UFM1-204ENST00000464423 DCCP43146 1447 aa25.44■■□□□ 1.66
UFM1-204ENST00000464423 TRAK1Q9UPV9 953 aa25.43■■□□□ 1.66
UFM1-204ENST00000464423 NBPF1Q3BBV0 1214 aa25.42■■□□□ 1.66
UFM1-204ENST00000464423 MST1RQ04912 1400 aa25.42■■□□□ 1.66
UFM1-204ENST00000464423 SAFB2Q14151 953 aaKnown RBP eCLIP25.41■■□□□ 1.66
UFM1-204ENST00000464423 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
UFM1-204ENST00000464423 SIRT1Q96EB6 747 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms