RNA–Protein interactions for RNA: ENST00000464116.2

XRCC6-207, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 359 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-207ENST00000464116 PHF14O94880 888 aa13.2□□□□□ -0.3
XRCC6-207ENST00000464116 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
XRCC6-207ENST00000464116 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
XRCC6-207ENST00000464116 KCNA1Q09470 495 aa13.19□□□□□ -0.3
XRCC6-207ENST00000464116 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
XRCC6-207ENST00000464116 ZNF608Q9ULD9 1512 aaPredicted RBP13.18□□□□□ -0.3
XRCC6-207ENST00000464116 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
XRCC6-207ENST00000464116 GLMNQ92990 594 aa13.17□□□□□ -0.3
XRCC6-207ENST00000464116 BRD1O95696 1058 aa13.16□□□□□ -0.3
XRCC6-207ENST00000464116 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
XRCC6-207ENST00000464116 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
XRCC6-207ENST00000464116 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
XRCC6-207ENST00000464116 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
XRCC6-207ENST00000464116 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
XRCC6-207ENST00000464116 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
XRCC6-207ENST00000464116 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
XRCC6-207ENST00000464116 PXYLP1Q8TE99 480 aa13.14□□□□□ -0.31
XRCC6-207ENST00000464116 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
XRCC6-207ENST00000464116 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
XRCC6-207ENST00000464116 USTQ9Y2C2 406 aa13.14□□□□□ -0.31
XRCC6-207ENST00000464116 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
XRCC6-207ENST00000464116 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
XRCC6-207ENST00000464116 ABL2P42684 1182 aa13.13□□□□□ -0.31
XRCC6-207ENST00000464116 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
XRCC6-207ENST00000464116 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
XRCC6-207ENST00000464116 E9PSI1 815 aa13.12□□□□□ -0.31
XRCC6-207ENST00000464116 NLRP7Q8WX94 980 aa13.12□□□□□ -0.31
XRCC6-207ENST00000464116 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
XRCC6-207ENST00000464116 SOGA1O94964 1423 aa13.12□□□□□ -0.31
XRCC6-207ENST00000464116 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
XRCC6-207ENST00000464116 HAX1O00165 279 aa13.11□□□□□ -0.31
XRCC6-207ENST00000464116 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
XRCC6-207ENST00000464116 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
XRCC6-207ENST00000464116 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
XRCC6-207ENST00000464116 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
XRCC6-207ENST00000464116 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
XRCC6-207ENST00000464116 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
XRCC6-207ENST00000464116 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
XRCC6-207ENST00000464116 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■□□□ 13.1
XRCC6-207ENST00000464116 IGSF3O75054 1194 aa13.09□□□□□ -0.31
XRCC6-207ENST00000464116 IER5LQ5T953 404 aa13.09□□□□□ -0.31
XRCC6-207ENST00000464116 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
XRCC6-207ENST00000464116 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
XRCC6-207ENST00000464116 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
XRCC6-207ENST00000464116 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
XRCC6-207ENST00000464116 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
XRCC6-207ENST00000464116 SPTLC1O15269 473 aa13.06□□□□□ -0.32
XRCC6-207ENST00000464116 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
XRCC6-207ENST00000464116 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
XRCC6-207ENST00000464116 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
XRCC6-207ENST00000464116 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
XRCC6-207ENST00000464116 CUX1P39880 1505 aa13.04□□□□□ -0.32
XRCC6-207ENST00000464116 SLC34A2O95436 690 aa13.04□□□□□ -0.32
XRCC6-207ENST00000464116 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
XRCC6-207ENST00000464116 PADI6Q6TGC4 694 aa13.04□□□□□ -0.32
XRCC6-207ENST00000464116 TDRD9Q8NDG6 1382 aaKnown RBP13.04□□□□□ -0.32
XRCC6-207ENST00000464116 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
XRCC6-207ENST00000464116 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
XRCC6-207ENST00000464116 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
XRCC6-207ENST00000464116 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
XRCC6-207ENST00000464116 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
XRCC6-207ENST00000464116 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
XRCC6-207ENST00000464116 CHD1O14646 1710 aa13.02□□□□□ -0.33
XRCC6-207ENST00000464116 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
XRCC6-207ENST00000464116 HDGFL1Q5TGJ6 251 aa13.01□□□□□ -0.33
XRCC6-207ENST00000464116 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
XRCC6-207ENST00000464116 GRIN2BQ13224 1484 aa13□□□□□ -0.33
XRCC6-207ENST00000464116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13□□□□□ -0.33
XRCC6-207ENST00000464116 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
XRCC6-207ENST00000464116 PLCG2P16885 1265 aa13□□□□□ -0.33
XRCC6-207ENST00000464116 GJA5P36382 358 aa13□□□□□ -0.33
XRCC6-207ENST00000464116 CCDC27Q2M243 656 aa13□□□□□ -0.33
XRCC6-207ENST00000464116 ASTLQ6HA08 431 aaPredicted RBP13□□□□□ -0.33
XRCC6-207ENST00000464116 RSBN1LQ6PCB5 846 aaPredicted RBP13□□□□□ -0.33
XRCC6-207ENST00000464116 AP1G2O75843 785 aa12.99□□□□□ -0.33
XRCC6-207ENST00000464116 CFAP70Q5T0N1 1121 aa12.99□□□□□ -0.33
XRCC6-207ENST00000464116 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
XRCC6-207ENST00000464116 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
XRCC6-207ENST00000464116 LILRB3O75022 631 aa12.98□□□□□ -0.33
XRCC6-207ENST00000464116 RFX1P22670 979 aa12.98□□□□□ -0.33
XRCC6-207ENST00000464116 WASHC4Q2M389 1173 aa12.98□□□□□ -0.33
XRCC6-207ENST00000464116 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
XRCC6-207ENST00000464116 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
XRCC6-207ENST00000464116 ADAMTS19Q8TE59 1207 aa12.96□□□□□ -0.33
XRCC6-207ENST00000464116 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.33
XRCC6-207ENST00000464116 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
XRCC6-207ENST00000464116 SYNJ2O15056 1496 aa12.96□□□□□ -0.34
XRCC6-207ENST00000464116 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.34
XRCC6-207ENST00000464116 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
XRCC6-207ENST00000464116 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
XRCC6-207ENST00000464116 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 CD46P15529 392 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 QPCTQ16769 361 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 SND1Q7KZF4 910 aaKnown RBP eCLIP12.95□□□□□ -0.34
XRCC6-207ENST00000464116 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
XRCC6-207ENST00000464116 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
XRCC6-207ENST00000464116 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms