RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MYO5BQ9ULV0 1848 aa31.24■■■□□ 2.59
PDLIM4-205ENST00000463615 NAIPQ13075 1403 aa31.23■■■□□ 2.59
PDLIM4-205ENST00000463615 SLC26A8Q96RN1 970 aa31.22■■■□□ 2.59
PDLIM4-205ENST00000463615 XIRP1Q702N8 1843 aaKnown RBP31.21■■■□□ 2.59
PDLIM4-205ENST00000463615 HSPA1LP34931 641 aa31.21■■■□□ 2.59
PDLIM4-205ENST00000463615 NWD1Q149M9 1564 aa31.21■■■□□ 2.59
PDLIM4-205ENST00000463615 SCAF1Q9H7N4 1312 aaKnown RBP31.21■■■□□ 2.59
PDLIM4-205ENST00000463615 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.2■■■□□ 2.59
PDLIM4-205ENST00000463615 NKTRP30414 1462 aaKnown RBP31.18■■■□□ 2.58
PDLIM4-205ENST00000463615 TMEM94Q12767 1356 aa31.15■■■□□ 2.58
PDLIM4-205ENST00000463615 HFM1A2PYH4 1435 aa31.15■■■□□ 2.58
PDLIM4-205ENST00000463615 TBX22Q9Y458 520 aa31.14■■■□□ 2.58
PDLIM4-205ENST00000463615 PPP1R15AO75807 674 aaPredicted RBP31.13■■■□□ 2.57
PDLIM4-205ENST00000463615 SPHKAPQ2M3C7 1700 aa31.12■■■□□ 2.57
PDLIM4-205ENST00000463615 CHGAP10645 457 aaKnown RBP31.12■■■□□ 2.57
PDLIM4-205ENST00000463615 ADAMTS13Q76LX8 1427 aa31.09■■■□□ 2.57
PDLIM4-205ENST00000463615 BCANQ96GW7 911 aa31.09■■■□□ 2.57
PDLIM4-205ENST00000463615 CHD2O14647 1828 aaKnown RBP31.09■■■□□ 2.57
PDLIM4-205ENST00000463615 DIP2AQ14689 1571 aa31.09■■■□□ 2.57
PDLIM4-205ENST00000463615 PROSER2Q86WR7 435 aaPredicted RBP31.08■■■□□ 2.57
PDLIM4-205ENST00000463615 PIK3R4Q99570 1358 aa31.06■■■□□ 2.56
PDLIM4-205ENST00000463615 ILDR2Q71H61 639 aa31.05■■■□□ 2.56
PDLIM4-205ENST00000463615 FAM135BQ49AJ0 1406 aa31.05■■■□□ 2.56
PDLIM4-205ENST00000463615 TRPM2O94759 1503 aa31.04■■■□□ 2.56
PDLIM4-205ENST00000463615 NCOA3Q9Y6Q9 1424 aa31.02■■■□□ 2.56
PDLIM4-205ENST00000463615 MED1Q15648 1581 aaPredicted RBP30.98■■■□□ 2.55
PDLIM4-205ENST00000463615 NUTM2DQ5VT03 806 aaPredicted RBP30.98■■■□□ 2.55
PDLIM4-205ENST00000463615 CLTCL1P53675 1640 aa30.98■■■□□ 2.55
PDLIM4-205ENST00000463615 SETBP1Q9Y6X0 1596 aa30.96■■■□□ 2.55
PDLIM4-205ENST00000463615 MSH6P52701 1360 aa30.96■■■□□ 2.55
PDLIM4-205ENST00000463615 RBM33Q96EV2 1170 aaKnown RBP30.94■■■□□ 2.54
PDLIM4-205ENST00000463615 SENP3Q9H4L4 574 aaPredicted RBP30.94■■■□□ 2.54
PDLIM4-205ENST00000463615 NRXN3Q9Y4C0 1643 aa30.93■■■□□ 2.54
PDLIM4-205ENST00000463615 TRIM52Q96A61 297 aa30.92■■■□□ 2.54
PDLIM4-205ENST00000463615 NEXMIFQ5QGS0 1516 aa30.9■■■□□ 2.54
PDLIM4-205ENST00000463615 ZNF326Q5BKZ1 582 aaKnown RBP30.89■■■□□ 2.54
PDLIM4-205ENST00000463615 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
PDLIM4-205ENST00000463615 PTPRUQ92729 1446 aa30.88■■■□□ 2.53
PDLIM4-205ENST00000463615 ROBO1Q9Y6N7 1651 aa30.87■■■□□ 2.53
PDLIM4-205ENST00000463615 KIF1BO60333 1816 aa30.87■■■□□ 2.53
PDLIM4-205ENST00000463615 SOCS7O14512 581 aa30.87■■■□□ 2.53
PDLIM4-205ENST00000463615 SLAIN2Q9P270 581 aa30.85■■■□□ 2.53
PDLIM4-205ENST00000463615 AMOTL2Q9Y2J4 779 aa30.85■■■□□ 2.53
PDLIM4-205ENST00000463615 XRN1Q8IZH2 1706 aaKnown RBP30.83■■■□□ 2.53
PDLIM4-205ENST00000463615 C19orf44Q9H6X5 657 aa30.82■■■□□ 2.52
PDLIM4-205ENST00000463615 RPGRIP1LQ68CZ1 1315 aa30.8■■■□□ 2.52
PDLIM4-205ENST00000463615 ACIN1Q9UKV3 1341 aaKnown RBP30.79■■■□□ 2.52
PDLIM4-205ENST00000463615 METP08581 1390 aa30.79■■■□□ 2.52
PDLIM4-205ENST00000463615 CADPS2Q86UW7 1296 aa30.78■■■□□ 2.52
PDLIM4-205ENST00000463615 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.77■■■□□ 2.52
PDLIM4-205ENST00000463615 VGFO15240 615 aaPredicted RBP30.76■■■□□ 2.51
PDLIM4-205ENST00000463615 DCCP43146 1447 aa30.75■■■□□ 2.51
PDLIM4-205ENST00000463615 C14orf37Q86TY3 774 aa30.74■■■□□ 2.51
PDLIM4-205ENST00000463615 ATF3P18847 181 aa30.71■■■□□ 2.51
PDLIM4-205ENST00000463615 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
PDLIM4-205ENST00000463615 PHF23Q9BUL5 403 aaPredicted RBP30.69■■■□□ 2.5
PDLIM4-205ENST00000463615 PRAG1Q86YV5 1406 aa30.69■■■□□ 2.5
PDLIM4-205ENST00000463615 SETD1AO15047 1707 aaKnown RBP30.68■■■□□ 2.5
PDLIM4-205ENST00000463615 PPLO60437 1756 aa30.68■■■□□ 2.5
PDLIM4-205ENST00000463615 CCDC144AA2RUR9 1427 aa30.67■■■□□ 2.5
PDLIM4-205ENST00000463615 FOXD1Q16676 465 aa30.67■■■□□ 2.5
PDLIM4-205ENST00000463615 PHLPP1O60346 1717 aa30.67■■■□□ 2.5
PDLIM4-205ENST00000463615 SETD5Q9C0A6 1442 aa30.66■■■□□ 2.5
PDLIM4-205ENST00000463615 SPATA31E1Q6ZUB1 1445 aa30.65■■■□□ 2.5
PDLIM4-205ENST00000463615 PTCH1Q13635 1447 aa30.64■■■□□ 2.5
PDLIM4-205ENST00000463615 COL16A1Q07092 1604 aaPredicted RBP30.64■■■□□ 2.5
PDLIM4-205ENST00000463615 AHDC1Q5TGY3 1603 aaPredicted RBP30.64■■■□□ 2.5
PDLIM4-205ENST00000463615 ADGRL3Q9HAR2 1447 aa30.64■■■□□ 2.49
PDLIM4-205ENST00000463615 JCADQ9P266 1359 aa30.63■■■□□ 2.49
PDLIM4-205ENST00000463615 MST1RQ04912 1400 aa30.59■■■□□ 2.49
PDLIM4-205ENST00000463615 BRINP3Q76B58 766 aa30.58■■■□□ 2.49
PDLIM4-205ENST00000463615 RGS17Q9UGC6 210 aaPredicted RBP30.58■■■□□ 2.49
PDLIM4-205ENST00000463615 ANKRD30BQ9BXX2 1392 aa30.57■■■□□ 2.48
PDLIM4-205ENST00000463615 ROBO2Q9HCK4 1378 aa30.54■■■□□ 2.48
PDLIM4-205ENST00000463615 NALCNQ8IZF0 1738 aa30.54■■■□□ 2.48
PDLIM4-205ENST00000463615 IFT172Q9UG01 1749 aa30.54■■■□□ 2.48
PDLIM4-205ENST00000463615 RAB3GAP2Q9H2M9 1393 aa30.53■■■□□ 2.48
PDLIM4-205ENST00000463615 ASXL1Q8IXJ9 1541 aa30.52■■■□□ 2.48
PDLIM4-205ENST00000463615 ADGRF5Q8IZF2 1346 aa30.52■■■□□ 2.48
PDLIM4-205ENST00000463615 SPATA31A6Q5VVP1 1343 aa30.5■■■□□ 2.47
PDLIM4-205ENST00000463615 RGL3Q3MIN7 710 aa30.49■■■□□ 2.47
PDLIM4-205ENST00000463615 SHPRHQ149N8 1683 aa30.48■■■□□ 2.47
PDLIM4-205ENST00000463615 NHSL1Q5SYE7 1610 aa30.47■■■□□ 2.47
PDLIM4-205ENST00000463615 TECPR2O15040 1411 aa30.46■■■□□ 2.47
PDLIM4-205ENST00000463615 PIK3C2GO75747 1445 aa30.46■■■□□ 2.47
PDLIM4-205ENST00000463615 HRCP23327 699 aa30.45■■■□□ 2.47
PDLIM4-205ENST00000463615 C1orf167Q5SNV9 1468 aa30.44■■■□□ 2.46
PDLIM4-205ENST00000463615 LRPPRCP42704 1394 aaKnown RBP30.41■■■□□ 2.46
PDLIM4-205ENST00000463615 NRXN1Q9ULB1 1477 aa30.41■■■□□ 2.46
PDLIM4-205ENST00000463615 ABCC11Q96J66 1382 aa30.41■■■□□ 2.46
PDLIM4-205ENST00000463615 LRP6O75581 1613 aa30.4■■■□□ 2.46
PDLIM4-205ENST00000463615 LAMC1P11047 1609 aa30.4■■■□□ 2.46
PDLIM4-205ENST00000463615 POTEAQ6S8J7 498 aa30.39■■■□□ 2.46
PDLIM4-205ENST00000463615 MYOM2P54296 1465 aa30.38■■■□□ 2.45
PDLIM4-205ENST00000463615 LRRC59Q96AG4 307 aaKnown RBP30.36■■■□□ 2.45
PDLIM4-205ENST00000463615 CDC42BPGQ6DT37 1551 aa30.36■■■□□ 2.45
PDLIM4-205ENST00000463615 KNDC1Q76NI1 1749 aa30.36■■■□□ 2.45
PDLIM4-205ENST00000463615 C14orf93Q9H972 538 aaKnown RBP30.34■■■□□ 2.45
PDLIM4-205ENST00000463615 SIRT1Q96EB6 747 aa30.33■■■□□ 2.45
PDLIM4-205ENST00000463615 YTHDC2Q9H6S0 1430 aaKnown RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms