RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 RTEL1-TNFRSF6BF6WH68 1400 aa11.61□□□□□ -0.55
LINC01140-201ENST00000461990 KDM6BO15054 1643 aa11.61□□□□□ -0.55
LINC01140-201ENST00000461990 NASPP49321 788 aaPredicted RBP11.61□□□□□ -0.55
LINC01140-201ENST00000461990 PDLIM2Q96JY6 352 aa11.6□□□□□ -0.55
LINC01140-201ENST00000461990 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
LINC01140-201ENST00000461990 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
LINC01140-201ENST00000461990 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
LINC01140-201ENST00000461990 UPF2Q9HAU5 1272 aaKnown RBP11.6□□□□□ -0.55
LINC01140-201ENST00000461990 USP47Q96K76 1375 aa11.6□□□□□ -0.55
LINC01140-201ENST00000461990 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
LINC01140-201ENST00000461990 FOXD1Q16676 465 aa11.59□□□□□ -0.55
LINC01140-201ENST00000461990 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
LINC01140-201ENST00000461990 GTF2F1P35269 517 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01140-201ENST00000461990 SENP3-EIF4A1A0A087X0R7 540 aa11.59□□□□□ -0.55
LINC01140-201ENST00000461990 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
LINC01140-201ENST00000461990 SUPT6HQ7KZ85 1726 aaKnown RBP11.58□□□□□ -0.56
LINC01140-201ENST00000461990 KIAA1107Q9UPP5 1409 aa11.58□□□□□ -0.56
LINC01140-201ENST00000461990 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.56
LINC01140-201ENST00000461990 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
LINC01140-201ENST00000461990 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
LINC01140-201ENST00000461990 MYRIPQ8NFW9 859 aa11.57□□□□□ -0.56
LINC01140-201ENST00000461990 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
LINC01140-201ENST00000461990 ZKSCAN5Q9Y2L8 839 aa11.57□□□□□ -0.56
LINC01140-201ENST00000461990 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
LINC01140-201ENST00000461990 RBM25P49756 843 aaKnown RBP11.57□□□□□ -0.56
LINC01140-201ENST00000461990 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
LINC01140-201ENST00000461990 HSP90AB1P08238 724 aaKnown RBP11.57□□□□□ -0.56
LINC01140-201ENST00000461990 MPHOSPH9Q99550 1183 aa11.57□□□□□ -0.56
LINC01140-201ENST00000461990 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
LINC01140-201ENST00000461990 GBP4Q96PP9 640 aa11.55□□□□□ -0.56
LINC01140-201ENST00000461990 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
LINC01140-201ENST00000461990 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
LINC01140-201ENST00000461990 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
LINC01140-201ENST00000461990 LRRIQ1Q96JM4 1722 aa11.54□□□□□ -0.56
LINC01140-201ENST00000461990 EPRSP07814 1512 aaKnown RBP11.54□□□□□ -0.56
LINC01140-201ENST00000461990 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
LINC01140-201ENST00000461990 ZNF445P59923 1031 aa11.54□□□□□ -0.56
LINC01140-201ENST00000461990 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
LINC01140-201ENST00000461990 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
LINC01140-201ENST00000461990 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
LINC01140-201ENST00000461990 UHRF1BP1Q6BDS2 1440 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 UGGT2Q9NYU1 1516 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
LINC01140-201ENST00000461990 DUSP27Q5VZP5 1158 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 RAB3GAP1Q15042 981 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
LINC01140-201ENST00000461990 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
LINC01140-201ENST00000461990 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.56
LINC01140-201ENST00000461990 HMGN5P82970 282 aaKnown RBP11.52□□□□□ -0.57
LINC01140-201ENST00000461990 ZNF521Q96K83 1311 aa11.52□□□□□ -0.57
LINC01140-201ENST00000461990 IGHDP01880 384 aa11.52□□□□□ -0.57
LINC01140-201ENST00000461990 KCNA4P22459 653 aa11.52□□□□□ -0.57
LINC01140-201ENST00000461990 ATP2B3Q16720 1220 aa11.52□□□□□ -0.57
LINC01140-201ENST00000461990 SMC5Q8IY18 1101 aa11.52□□□□□ -0.57
LINC01140-201ENST00000461990 TNPO1Q92973 898 aaKnown RBP11.52□□□□□ -0.57
LINC01140-201ENST00000461990 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
LINC01140-201ENST00000461990 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
LINC01140-201ENST00000461990 CBX1P83916 185 aa11.51□□□□□ -0.57
LINC01140-201ENST00000461990 NBPF1Q3BBV0 1214 aa11.51□□□□□ -0.57
LINC01140-201ENST00000461990 DNTTIP2Q5QJE6 756 aaKnown RBP11.51□□□□□ -0.57
LINC01140-201ENST00000461990 PBRM1Q86U86 1689 aa11.51□□□□□ -0.57
LINC01140-201ENST00000461990 IRX3P78415 501 aaPredicted RBP11.51□□□□□ -0.57
LINC01140-201ENST00000461990 PLXNC1O60486 1568 aa11.51□□□□□ -0.57
LINC01140-201ENST00000461990 CHD1O14646 1710 aa11.51□□□□□ -0.57
LINC01140-201ENST00000461990 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
LINC01140-201ENST00000461990 SNX21Q969T3 373 aa11.5□□□□□ -0.57
LINC01140-201ENST00000461990 PANK3Q9H999 370 aa11.5□□□□□ -0.57
LINC01140-201ENST00000461990 ARID3AQ99856 593 aa11.5□□□□□ -0.57
LINC01140-201ENST00000461990 IGF1RP08069 1367 aa11.5□□□□□ -0.57
LINC01140-201ENST00000461990 SECISBP2LQ93073 1101 aaKnown RBP11.49□□□□□ -0.57
LINC01140-201ENST00000461990 CCDC39Q9UFE4 941 aa11.49□□□□□ -0.57
LINC01140-201ENST00000461990 CGNL1Q0VF96 1302 aa11.49□□□□□ -0.57
LINC01140-201ENST00000461990 CGNQ9P2M7 1197 aaKnown RBP11.49□□□□□ -0.57
LINC01140-201ENST00000461990 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
LINC01140-201ENST00000461990 MMP14P50281 582 aa11.48□□□□□ -0.57
LINC01140-201ENST00000461990 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
LINC01140-201ENST00000461990 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
LINC01140-201ENST00000461990 ANKRD30AQ9BXX3 1397 aa11.48□□□□□ -0.57
LINC01140-201ENST00000461990 HSCBQ8IWL3 235 aa11.47□□□□□ -0.57
LINC01140-201ENST00000461990 FEZ1Q99689 392 aa11.47□□□□□ -0.57
LINC01140-201ENST00000461990 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
LINC01140-201ENST00000461990 MAGI1Q96QZ7 1491 aaPredicted RBP11.47□□□□□ -0.57
LINC01140-201ENST00000461990 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
LINC01140-201ENST00000461990 TULP2O00295 520 aa11.46□□□□□ -0.57
LINC01140-201ENST00000461990 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
LINC01140-201ENST00000461990 C22orf23Q9BZE7 217 aa11.46□□□□□ -0.57
LINC01140-201ENST00000461990 ZBTB22O15209 634 aa11.46□□□□□ -0.58
LINC01140-201ENST00000461990 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.58
LINC01140-201ENST00000461990 ARHGEF12Q9NZN5 1544 aa11.46□□□□□ -0.58
LINC01140-201ENST00000461990 NKTRP30414 1462 aaKnown RBP11.46□□□□□ -0.58
LINC01140-201ENST00000461990 YY1AP1Q9H869 796 aa11.45□□□□□ -0.58
LINC01140-201ENST00000461990 ROCK1Q13464 1354 aa11.45□□□□□ -0.58
LINC01140-201ENST00000461990 PLEKHH1Q9ULM0 1364 aa11.45□□□□□ -0.58
LINC01140-201ENST00000461990 FHOD3Q2V2M9 1422 aa11.45□□□□□ -0.58
LINC01140-201ENST00000461990 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
LINC01140-201ENST00000461990 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
LINC01140-201ENST00000461990 ANKRD7Q92527 254 aa11.44□□□□□ -0.58
LINC01140-201ENST00000461990 CLUAP1Q96AJ1 413 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms