RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 FOXD1Q16676 465 aa15.68■□□□□ 0.1
TRAPPC12-213ENST00000461577 ZNF326Q5BKZ1 582 aaKnown RBP15.67■□□□□ 0.1
TRAPPC12-213ENST00000461577 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRAPPC12-213ENST00000461577 BCANQ96GW7 911 aa15.67■□□□□ 0.1
TRAPPC12-213ENST00000461577 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
TRAPPC12-213ENST00000461577 ZFYVE9O95405 1425 aa15.66■□□□□ 0.1
TRAPPC12-213ENST00000461577 HRCP23327 699 aa15.65■□□□□ 0.1
TRAPPC12-213ENST00000461577 NUTM2DQ5VT03 806 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC12-213ENST00000461577 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC12-213ENST00000461577 PLEKHG1Q9ULL1 1385 aa15.62■□□□□ 0.09
TRAPPC12-213ENST00000461577 CCDC144AA2RUR9 1427 aa15.61■□□□□ 0.09
TRAPPC12-213ENST00000461577 FBXO41Q8TF61 875 aa15.61■□□□□ 0.09
TRAPPC12-213ENST00000461577 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
TRAPPC12-213ENST00000461577 CPS1P31327 1500 aa15.61■□□□□ 0.09
TRAPPC12-213ENST00000461577 IQSEC2Q5JU85 1478 aa15.59■□□□□ 0.09
TRAPPC12-213ENST00000461577 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-213ENST00000461577 STRCP1A6NGW2 1772 aa15.58■□□□□ 0.08
TRAPPC12-213ENST00000461577 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC12-213ENST00000461577 NEXMIFQ5QGS0 1516 aa15.57■□□□□ 0.08
TRAPPC12-213ENST00000461577 RPGRIP1LQ68CZ1 1315 aa15.56■□□□□ 0.08
TRAPPC12-213ENST00000461577 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
TRAPPC12-213ENST00000461577 DIP2AQ14689 1571 aa15.54■□□□□ 0.08
TRAPPC12-213ENST00000461577 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC12-213ENST00000461577 KCNA6P17658 529 aa15.54■□□□□ 0.08
TRAPPC12-213ENST00000461577 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
TRAPPC12-213ENST00000461577 PPLO60437 1756 aa15.53■□□□□ 0.08
TRAPPC12-213ENST00000461577 ADAMTS13Q76LX8 1427 aa15.52■□□□□ 0.08
TRAPPC12-213ENST00000461577 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
TRAPPC12-213ENST00000461577 LRRC7Q96NW7 1537 aa15.52■□□□□ 0.07
TRAPPC12-213ENST00000461577 CHD2O14647 1828 aaKnown RBP15.52■□□□□ 0.07
TRAPPC12-213ENST00000461577 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
TRAPPC12-213ENST00000461577 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
TRAPPC12-213ENST00000461577 SPATA31E1Q6ZUB1 1445 aa15.51■□□□□ 0.07
TRAPPC12-213ENST00000461577 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
TRAPPC12-213ENST00000461577 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
TRAPPC12-213ENST00000461577 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
TRAPPC12-213ENST00000461577 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC12-213ENST00000461577 NKTRP30414 1462 aaKnown RBP15.48■□□□□ 0.07
TRAPPC12-213ENST00000461577 IFT172Q9UG01 1749 aa15.48■□□□□ 0.07
TRAPPC12-213ENST00000461577 TOM1O60784 492 aa15.47■□□□□ 0.07
TRAPPC12-213ENST00000461577 XIRP1Q702N8 1843 aaKnown RBP15.46■□□□□ 0.07
TRAPPC12-213ENST00000461577 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
TRAPPC12-213ENST00000461577 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
TRAPPC12-213ENST00000461577 ADGRF5Q8IZF2 1346 aa15.44■□□□□ 0.06
TRAPPC12-213ENST00000461577 ALKQ9UM73 1620 aa15.44■□□□□ 0.06
TRAPPC12-213ENST00000461577 RBM33Q96EV2 1170 aaKnown RBP15.44■□□□□ 0.06
TRAPPC12-213ENST00000461577 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-213ENST00000461577 PTPRUQ92729 1446 aa15.43■□□□□ 0.06
TRAPPC12-213ENST00000461577 METP08581 1390 aa15.43■□□□□ 0.06
TRAPPC12-213ENST00000461577 PIP4K2BP78356 416 aa15.42■□□□□ 0.06
TRAPPC12-213ENST00000461577 SETD1AO15047 1707 aaKnown RBP15.42■□□□□ 0.06
TRAPPC12-213ENST00000461577 XRN1Q8IZH2 1706 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-213ENST00000461577 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
TRAPPC12-213ENST00000461577 MYOM2P54296 1465 aa15.4■□□□□ 0.06
TRAPPC12-213ENST00000461577 MSH6P52701 1360 aa15.39■□□□□ 0.05
TRAPPC12-213ENST00000461577 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
TRAPPC12-213ENST00000461577 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
TRAPPC12-213ENST00000461577 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
TRAPPC12-213ENST00000461577 DCAF11Q8TEB1 546 aa15.38■□□□□ 0.05
TRAPPC12-213ENST00000461577 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-213ENST00000461577 NRXN1Q9ULB1 1477 aa15.36■□□□□ 0.05
TRAPPC12-213ENST00000461577 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
TRAPPC12-213ENST00000461577 LAMC1P11047 1609 aa15.35■□□□□ 0.05
TRAPPC12-213ENST00000461577 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
TRAPPC12-213ENST00000461577 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
TRAPPC12-213ENST00000461577 C19orf44Q9H6X5 657 aa15.34■□□□□ 0.05
TRAPPC12-213ENST00000461577 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
TRAPPC12-213ENST00000461577 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC12-213ENST00000461577 ATF3P18847 181 aa15.33■□□□□ 0.04
TRAPPC12-213ENST00000461577 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
TRAPPC12-213ENST00000461577 SIN3AQ96ST3 1273 aa15.33■□□□□ 0.04
TRAPPC12-213ENST00000461577 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
TRAPPC12-213ENST00000461577 STK26Q9P289 416 aa15.33■□□□□ 0.04
TRAPPC12-213ENST00000461577 PTCH1Q13635 1447 aa15.33■□□□□ 0.04
TRAPPC12-213ENST00000461577 CADPS2Q86UW7 1296 aa15.32■□□□□ 0.04
TRAPPC12-213ENST00000461577 LRPPRCP42704 1394 aaKnown RBP15.32■□□□□ 0.04
TRAPPC12-213ENST00000461577 ROBO2Q9HCK4 1378 aa15.31■□□□□ 0.04
TRAPPC12-213ENST00000461577 ASXL1Q8IXJ9 1541 aa15.31■□□□□ 0.04
TRAPPC12-213ENST00000461577 KNDC1Q76NI1 1749 aa15.3■□□□□ 0.04
TRAPPC12-213ENST00000461577 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
TRAPPC12-213ENST00000461577 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
TRAPPC12-213ENST00000461577 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
TRAPPC12-213ENST00000461577 ADGRL3Q9HAR2 1447 aa15.29■□□□□ 0.04
TRAPPC12-213ENST00000461577 ABCC11Q96J66 1382 aa15.29■□□□□ 0.04
TRAPPC12-213ENST00000461577 HSPA1LP34931 641 aa15.29■□□□□ 0.04
TRAPPC12-213ENST00000461577 NALCNQ8IZF0 1738 aa15.29■□□□□ 0.04
TRAPPC12-213ENST00000461577 DCCP43146 1447 aa15.28■□□□□ 0.04
TRAPPC12-213ENST00000461577 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
TRAPPC12-213ENST00000461577 ROBO1Q9Y6N7 1651 aa15.28■□□□□ 0.04
TRAPPC12-213ENST00000461577 TECPR2O15040 1411 aa15.27■□□□□ 0.04
TRAPPC12-213ENST00000461577 L3MBTL2Q969R5 705 aa15.26■□□□□ 0.03
TRAPPC12-213ENST00000461577 WAPLQ7Z5K2 1190 aa15.25■□□□□ 0.03
TRAPPC12-213ENST00000461577 KIAA1210Q9ULL0 1709 aa15.24■□□□□ 0.03
TRAPPC12-213ENST00000461577 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
TRAPPC12-213ENST00000461577 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
TRAPPC12-213ENST00000461577 POGKQ9P215 609 aa15.23■□□□□ 0.03
TRAPPC12-213ENST00000461577 TRAK1Q9UPV9 953 aa15.23■□□□□ 0.03
TRAPPC12-213ENST00000461577 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
TRAPPC12-213ENST00000461577 MST1RQ04912 1400 aa15.22■□□□□ 0.03
TRAPPC12-213ENST00000461577 DLC1Q96QB1 1528 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms