RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 BCANQ96GW7 911 aa26.3■■□□□ 1.8
MRPL28-207ENST00000461550 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
MRPL28-207ENST00000461550 PPP1R15AO75807 674 aaPredicted RBP26.29■■□□□ 1.8
MRPL28-207ENST00000461550 PIP4K2BP78356 416 aa26.29■■□□□ 1.8
MRPL28-207ENST00000461550 NUTM2DQ5VT03 806 aaPredicted RBP26.29■■□□□ 1.8
MRPL28-207ENST00000461550 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
MRPL28-207ENST00000461550 XIRP1Q702N8 1843 aaKnown RBP26.27■■□□□ 1.8
MRPL28-207ENST00000461550 ALKQ9UM73 1620 aa26.27■■□□□ 1.8
MRPL28-207ENST00000461550 TOM1O60784 492 aa26.25■■□□□ 1.79
MRPL28-207ENST00000461550 PLEKHG1Q9ULL1 1385 aa26.25■■□□□ 1.79
MRPL28-207ENST00000461550 CLTCL1P53675 1640 aa26.24■■□□□ 1.79
MRPL28-207ENST00000461550 HDGFP51858 240 aaKnown RBP26.22■■□□□ 1.79
MRPL28-207ENST00000461550 TRPM2O94759 1503 aa26.21■■□□□ 1.79
MRPL28-207ENST00000461550 KCNA6P17658 529 aa26.2■■□□□ 1.78
MRPL28-207ENST00000461550 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.2■■□□□ 1.78
MRPL28-207ENST00000461550 NWD1Q149M9 1564 aa26.18■■□□□ 1.78
MRPL28-207ENST00000461550 RBM33Q96EV2 1170 aaKnown RBP26.18■■□□□ 1.78
MRPL28-207ENST00000461550 SLC4A1APQ9BWU0 796 aaKnown RBP26.18■■□□□ 1.78
MRPL28-207ENST00000461550 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
MRPL28-207ENST00000461550 CHD2O14647 1828 aaKnown RBP26.15■■□□□ 1.78
MRPL28-207ENST00000461550 TMEM94Q12767 1356 aa26.15■■□□□ 1.78
MRPL28-207ENST00000461550 ADAMTS13Q76LX8 1427 aa26.15■■□□□ 1.78
MRPL28-207ENST00000461550 KIF1BO60333 1816 aa26.15■■□□□ 1.78
MRPL28-207ENST00000461550 HSPA1LP34931 641 aa26.14■■□□□ 1.78
MRPL28-207ENST00000461550 PROSER2Q86WR7 435 aaPredicted RBP26.14■■□□□ 1.78
MRPL28-207ENST00000461550 NKTRP30414 1462 aaKnown RBP26.14■■□□□ 1.77
MRPL28-207ENST00000461550 FOXD1Q16676 465 aa26.12■■□□□ 1.77
MRPL28-207ENST00000461550 DIP2AQ14689 1571 aa26.11■■□□□ 1.77
MRPL28-207ENST00000461550 TBX22Q9Y458 520 aa26.11■■□□□ 1.77
MRPL28-207ENST00000461550 NRXN3Q9Y4C0 1643 aa26.09■■□□□ 1.77
MRPL28-207ENST00000461550 NEXMIFQ5QGS0 1516 aa26.09■■□□□ 1.77
MRPL28-207ENST00000461550 DISP3Q9P2K9 1392 aa26.07■■□□□ 1.76
MRPL28-207ENST00000461550 SETBP1Q9Y6X0 1596 aa26.05■■□□□ 1.76
MRPL28-207ENST00000461550 SETD5Q9C0A6 1442 aa26.03■■□□□ 1.76
MRPL28-207ENST00000461550 MPHOSPH9Q99550 1183 aa26.03■■□□□ 1.76
MRPL28-207ENST00000461550 PTPRUQ92729 1446 aa26.02■■□□□ 1.76
MRPL28-207ENST00000461550 PIK3R4Q99570 1358 aa26■■□□□ 1.75
MRPL28-207ENST00000461550 MSH6P52701 1360 aa25.99■■□□□ 1.75
MRPL28-207ENST00000461550 AMOTL2Q9Y2J4 779 aa25.98■■□□□ 1.75
MRPL28-207ENST00000461550 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
MRPL28-207ENST00000461550 METP08581 1390 aa25.96■■□□□ 1.75
MRPL28-207ENST00000461550 PPLO60437 1756 aa25.96■■□□□ 1.75
MRPL28-207ENST00000461550 XRN1Q8IZH2 1706 aaKnown RBP25.96■■□□□ 1.75
MRPL28-207ENST00000461550 ROBO1Q9Y6N7 1651 aa25.96■■□□□ 1.75
MRPL28-207ENST00000461550 C14orf37Q86TY3 774 aa25.95■■□□□ 1.74
MRPL28-207ENST00000461550 CCDC144AA2RUR9 1427 aa25.95■■□□□ 1.74
MRPL28-207ENST00000461550 FAM135BQ49AJ0 1406 aa25.92■■□□□ 1.74
MRPL28-207ENST00000461550 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.91■■□□□ 1.74
MRPL28-207ENST00000461550 MED1Q15648 1581 aaPredicted RBP25.91■■□□□ 1.74
MRPL28-207ENST00000461550 SETD1AO15047 1707 aaKnown RBP25.9■■□□□ 1.74
MRPL28-207ENST00000461550 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
MRPL28-207ENST00000461550 NCOA3Q9Y6Q9 1424 aa25.89■■□□□ 1.74
MRPL28-207ENST00000461550 RGL3Q3MIN7 710 aa25.89■■□□□ 1.73
MRPL28-207ENST00000461550 RPGRIP1LQ68CZ1 1315 aa25.89■■□□□ 1.73
MRPL28-207ENST00000461550 ILDR2Q71H61 639 aa25.88■■□□□ 1.73
MRPL28-207ENST00000461550 SLAIN2Q9P270 581 aa25.88■■□□□ 1.73
MRPL28-207ENST00000461550 SPATA31E1Q6ZUB1 1445 aa25.87■■□□□ 1.73
MRPL28-207ENST00000461550 IFT172Q9UG01 1749 aa25.85■■□□□ 1.73
MRPL28-207ENST00000461550 ACIN1Q9UKV3 1341 aaKnown RBP25.84■■□□□ 1.73
MRPL28-207ENST00000461550 C19orf44Q9H6X5 657 aa25.84■■□□□ 1.73
MRPL28-207ENST00000461550 ADGRF5Q8IZF2 1346 aa25.82■■□□□ 1.72
MRPL28-207ENST00000461550 ATF3P18847 181 aa25.81■■□□□ 1.72
MRPL28-207ENST00000461550 PHLPP1O60346 1717 aa25.8■■□□□ 1.72
MRPL28-207ENST00000461550 CADPS2Q86UW7 1296 aa25.79■■□□□ 1.72
MRPL28-207ENST00000461550 NALCNQ8IZF0 1738 aa25.79■■□□□ 1.72
MRPL28-207ENST00000461550 ANKRD30BQ9BXX2 1392 aa25.75■■□□□ 1.71
MRPL28-207ENST00000461550 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
MRPL28-207ENST00000461550 DCCP43146 1447 aa25.75■■□□□ 1.71
MRPL28-207ENST00000461550 ADGRL3Q9HAR2 1447 aa25.75■■□□□ 1.71
MRPL28-207ENST00000461550 PTCH1Q13635 1447 aa25.74■■□□□ 1.71
MRPL28-207ENST00000461550 COL16A1Q07092 1604 aaPredicted RBP25.71■■□□□ 1.71
MRPL28-207ENST00000461550 PIK3C2GO75747 1445 aa25.7■■□□□ 1.7
MRPL28-207ENST00000461550 MST1RQ04912 1400 aa25.7■■□□□ 1.7
MRPL28-207ENST00000461550 ASXL1Q8IXJ9 1541 aa25.7■■□□□ 1.7
MRPL28-207ENST00000461550 PHF23Q9BUL5 403 aaPredicted RBP25.7■■□□□ 1.7
MRPL28-207ENST00000461550 BRINP3Q76B58 766 aa25.69■■□□□ 1.7
MRPL28-207ENST00000461550 AHDC1Q5TGY3 1603 aaPredicted RBP25.68■■□□□ 1.7
MRPL28-207ENST00000461550 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
MRPL28-207ENST00000461550 HRCP23327 699 aa25.67■■□□□ 1.7
MRPL28-207ENST00000461550 STK26Q9P289 416 aa25.67■■□□□ 1.7
MRPL28-207ENST00000461550 TMEM132EQ6IEE7 984 aa25.66■■□□□ 1.7
MRPL28-207ENST00000461550 MYOM2P54296 1465 aa25.64■■□□□ 1.69
MRPL28-207ENST00000461550 NRXN1Q9ULB1 1477 aa25.62■■□□□ 1.69
MRPL28-207ENST00000461550 JCADQ9P266 1359 aa25.62■■□□□ 1.69
MRPL28-207ENST00000461550 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
MRPL28-207ENST00000461550 KNDC1Q76NI1 1749 aa25.61■■□□□ 1.69
MRPL28-207ENST00000461550 NHSL1Q5SYE7 1610 aa25.6■■□□□ 1.69
MRPL28-207ENST00000461550 TECPR2O15040 1411 aa25.59■■□□□ 1.69
MRPL28-207ENST00000461550 CFAP70Q5T0N1 1121 aa25.59■■□□□ 1.69
MRPL28-207ENST00000461550 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
MRPL28-207ENST00000461550 DDX17Q92841 729 aaKnown RBP25.59■■□□□ 1.69
MRPL28-207ENST00000461550 C1orf167Q5SNV9 1468 aa25.58■■□□□ 1.69
MRPL28-207ENST00000461550 LAMC1P11047 1609 aa25.58■■□□□ 1.69
MRPL28-207ENST00000461550 YTHDC2Q9H6S0 1430 aaKnown RBP25.58■■□□□ 1.68
MRPL28-207ENST00000461550 SOCS7O14512 581 aa25.57■■□□□ 1.68
MRPL28-207ENST00000461550 C14orf93Q9H972 538 aaKnown RBP25.57■■□□□ 1.68
MRPL28-207ENST00000461550 PLEKHH1Q9ULM0 1364 aa25.57■■□□□ 1.68
MRPL28-207ENST00000461550 RGS17Q9UGC6 210 aaPredicted RBP25.56■■□□□ 1.68
MRPL28-207ENST00000461550 SHPRHQ149N8 1683 aa25.56■■□□□ 1.68
MRPL28-207ENST00000461550 ABCC11Q96J66 1382 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms