RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.62■■□□□ 1.37
GGA1-216ENST00000460957 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
GGA1-216ENST00000460957 CPS1P31327 1500 aa23.6■■□□□ 1.37
GGA1-216ENST00000460957 IQSEC2Q5JU85 1478 aa23.59■■□□□ 1.37
GGA1-216ENST00000460957 TRPM2O94759 1503 aa23.59■■□□□ 1.37
GGA1-216ENST00000460957 KIF1BO60333 1816 aa23.58■■□□□ 1.37
GGA1-216ENST00000460957 NUTM2DQ5VT03 806 aaPredicted RBP23.57■■□□□ 1.36
GGA1-216ENST00000460957 MPHOSPH9Q99550 1183 aa23.57■■□□□ 1.36
GGA1-216ENST00000460957 CLTCL1P53675 1640 aa23.56■■□□□ 1.36
GGA1-216ENST00000460957 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
GGA1-216ENST00000460957 SLC26A8Q96RN1 970 aa23.55■■□□□ 1.36
GGA1-216ENST00000460957 ZFYVE9O95405 1425 aa23.55■■□□□ 1.36
GGA1-216ENST00000460957 FOXD1Q16676 465 aa23.54■■□□□ 1.36
GGA1-216ENST00000460957 PLEKHG1Q9ULL1 1385 aa23.52■■□□□ 1.36
GGA1-216ENST00000460957 UBAP1LF5GYI3 381 aa23.51■■□□□ 1.35
GGA1-216ENST00000460957 STRCP1A6NGW2 1772 aa23.48■■□□□ 1.35
GGA1-216ENST00000460957 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
GGA1-216ENST00000460957 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
GGA1-216ENST00000460957 TOM1O60784 492 aa23.44■■□□□ 1.34
GGA1-216ENST00000460957 KCNA6P17658 529 aa23.44■■□□□ 1.34
GGA1-216ENST00000460957 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
GGA1-216ENST00000460957 TBX22Q9Y458 520 aa23.42■■□□□ 1.34
GGA1-216ENST00000460957 DIP2AQ14689 1571 aa23.41■■□□□ 1.34
GGA1-216ENST00000460957 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
GGA1-216ENST00000460957 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
GGA1-216ENST00000460957 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.33
GGA1-216ENST00000460957 HRCP23327 699 aa23.39■■□□□ 1.33
GGA1-216ENST00000460957 PIP4K2BP78356 416 aa23.39■■□□□ 1.33
GGA1-216ENST00000460957 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
GGA1-216ENST00000460957 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
GGA1-216ENST00000460957 CHD2O14647 1828 aaKnown RBP23.36■■□□□ 1.33
GGA1-216ENST00000460957 ADAMTS13Q76LX8 1427 aa23.36■■□□□ 1.33
GGA1-216ENST00000460957 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
GGA1-216ENST00000460957 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
GGA1-216ENST00000460957 C14orf37Q86TY3 774 aa23.34■■□□□ 1.33
GGA1-216ENST00000460957 TMEM94Q12767 1356 aa23.34■■□□□ 1.33
GGA1-216ENST00000460957 PIK3R4Q99570 1358 aa23.34■■□□□ 1.33
GGA1-216ENST00000460957 SETBP1Q9Y6X0 1596 aa23.34■■□□□ 1.33
GGA1-216ENST00000460957 PPLO60437 1756 aa23.33■■□□□ 1.33
GGA1-216ENST00000460957 RBM33Q96EV2 1170 aaKnown RBP23.31■■□□□ 1.32
GGA1-216ENST00000460957 AMOTL2Q9Y2J4 779 aa23.3■■□□□ 1.32
GGA1-216ENST00000460957 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
GGA1-216ENST00000460957 NRXN3Q9Y4C0 1643 aa23.3■■□□□ 1.32
GGA1-216ENST00000460957 MSH6P52701 1360 aa23.28■■□□□ 1.32
GGA1-216ENST00000460957 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
GGA1-216ENST00000460957 SPATA31E1Q6ZUB1 1445 aa23.26■■□□□ 1.31
GGA1-216ENST00000460957 METP08581 1390 aa23.23■■□□□ 1.31
GGA1-216ENST00000460957 PTPRUQ92729 1446 aa23.22■■□□□ 1.31
GGA1-216ENST00000460957 ALKQ9UM73 1620 aa23.22■■□□□ 1.31
GGA1-216ENST00000460957 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
GGA1-216ENST00000460957 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
GGA1-216ENST00000460957 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.3
GGA1-216ENST00000460957 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
GGA1-216ENST00000460957 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
GGA1-216ENST00000460957 ATF3P18847 181 aa23.18■■□□□ 1.3
GGA1-216ENST00000460957 HSPA1LP34931 641 aa23.16■■□□□ 1.3
GGA1-216ENST00000460957 C19orf44Q9H6X5 657 aa23.15■■□□□ 1.3
GGA1-216ENST00000460957 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
GGA1-216ENST00000460957 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
GGA1-216ENST00000460957 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
GGA1-216ENST00000460957 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
GGA1-216ENST00000460957 SLAIN2Q9P270 581 aa23.12■■□□□ 1.29
GGA1-216ENST00000460957 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.12■■□□□ 1.29
GGA1-216ENST00000460957 MYOM2P54296 1465 aa23.11■■□□□ 1.29
GGA1-216ENST00000460957 PIK3C2GO75747 1445 aa23.11■■□□□ 1.29
GGA1-216ENST00000460957 STK26Q9P289 416 aa23.11■■□□□ 1.29
GGA1-216ENST00000460957 ROBO1Q9Y6N7 1651 aa23.09■■□□□ 1.29
GGA1-216ENST00000460957 FAM135BQ49AJ0 1406 aa23.08■■□□□ 1.29
GGA1-216ENST00000460957 LAMC1P11047 1609 aa23.08■■□□□ 1.28
GGA1-216ENST00000460957 PTCH1Q13635 1447 aa23.08■■□□□ 1.28
GGA1-216ENST00000460957 TMEM132EQ6IEE7 984 aa23.07■■□□□ 1.28
GGA1-216ENST00000460957 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
GGA1-216ENST00000460957 DCCP43146 1447 aa23.05■■□□□ 1.28
GGA1-216ENST00000460957 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
GGA1-216ENST00000460957 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
GGA1-216ENST00000460957 ROBO2Q9HCK4 1378 aa23.04■■□□□ 1.28
GGA1-216ENST00000460957 CFAP70Q5T0N1 1121 aa23.04■■□□□ 1.28
GGA1-216ENST00000460957 C14orf93Q9H972 538 aaKnown RBP23.04■■□□□ 1.28
GGA1-216ENST00000460957 NALCNQ8IZF0 1738 aa23.03■■□□□ 1.28
GGA1-216ENST00000460957 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
GGA1-216ENST00000460957 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
GGA1-216ENST00000460957 YTHDC2Q9H6S0 1430 aaKnown RBP23■■□□□ 1.27
GGA1-216ENST00000460957 DISP3Q9P2K9 1392 aa23■■□□□ 1.27
GGA1-216ENST00000460957 KNDC1Q76NI1 1749 aa22.99■■□□□ 1.27
GGA1-216ENST00000460957 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
GGA1-216ENST00000460957 PHLPP1O60346 1717 aa22.99■■□□□ 1.27
GGA1-216ENST00000460957 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
GGA1-216ENST00000460957 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
GGA1-216ENST00000460957 ABCC11Q96J66 1382 aa22.98■■□□□ 1.27
GGA1-216ENST00000460957 WAPLQ7Z5K2 1190 aa22.96■■□□□ 1.27
GGA1-216ENST00000460957 TECPR2O15040 1411 aa22.96■■□□□ 1.27
GGA1-216ENST00000460957 POGKQ9P215 609 aa22.95■■□□□ 1.26
GGA1-216ENST00000460957 MST1RQ04912 1400 aa22.94■■□□□ 1.26
GGA1-216ENST00000460957 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
GGA1-216ENST00000460957 BRINP3Q76B58 766 aa22.92■■□□□ 1.26
GGA1-216ENST00000460957 SAFB2Q14151 953 aaKnown RBP eCLIP22.91■■□□□ 1.26
GGA1-216ENST00000460957 TRAK1Q9UPV9 953 aa22.91■■□□□ 1.26
GGA1-216ENST00000460957 SIRT1Q96EB6 747 aa22.9■■□□□ 1.26
GGA1-216ENST00000460957 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.26
GGA1-216ENST00000460957 PRAM1Q96QH2 718 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms