RNA–Protein interactions for RNA: ENST00000460053.1

SPOCK2-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 5

Gene SPOCK2, Length 812 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-204ENST00000460053 RIMS2Q9UQ26 1411 aa24.67■■□□□ 1.54
SPOCK2-204ENST00000460053 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.66■■□□□ 1.54
SPOCK2-204ENST00000460053 PPP1R15AO75807 674 aaPredicted RBP24.65■■□□□ 1.54
SPOCK2-204ENST00000460053 ZFYVE9O95405 1425 aa24.65■■□□□ 1.54
SPOCK2-204ENST00000460053 HRCP23327 699 aa24.65■■□□□ 1.54
SPOCK2-204ENST00000460053 BCANQ96GW7 911 aa24.65■■□□□ 1.54
SPOCK2-204ENST00000460053 ZNF326Q5BKZ1 582 aaKnown RBP24.63■■□□□ 1.53
SPOCK2-204ENST00000460053 NUTM2DQ5VT03 806 aaPredicted RBP24.63■■□□□ 1.53
SPOCK2-204ENST00000460053 CLTCL1P53675 1640 aa24.63■■□□□ 1.53
SPOCK2-204ENST00000460053 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
SPOCK2-204ENST00000460053 SLC26A8Q96RN1 970 aa24.61■■□□□ 1.53
SPOCK2-204ENST00000460053 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.53
SPOCK2-204ENST00000460053 KIF1BO60333 1816 aa24.56■■□□□ 1.52
SPOCK2-204ENST00000460053 CPS1P31327 1500 aa24.56■■□□□ 1.52
SPOCK2-204ENST00000460053 CCDC144AA2RUR9 1427 aa24.53■■□□□ 1.52
SPOCK2-204ENST00000460053 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
SPOCK2-204ENST00000460053 TBX22Q9Y458 520 aa24.51■■□□□ 1.51
SPOCK2-204ENST00000460053 STRCP1A6NGW2 1772 aa24.51■■□□□ 1.51
SPOCK2-204ENST00000460053 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
SPOCK2-204ENST00000460053 KCNA6P17658 529 aa24.5■■□□□ 1.51
SPOCK2-204ENST00000460053 RPGRIP1LQ68CZ1 1315 aa24.48■■□□□ 1.51
SPOCK2-204ENST00000460053 NEXMIFQ5QGS0 1516 aa24.47■■□□□ 1.51
SPOCK2-204ENST00000460053 VGFO15240 615 aaPredicted RBP24.47■■□□□ 1.51
SPOCK2-204ENST00000460053 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
SPOCK2-204ENST00000460053 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
SPOCK2-204ENST00000460053 ADAMTS13Q76LX8 1427 aa24.45■■□□□ 1.51
SPOCK2-204ENST00000460053 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
SPOCK2-204ENST00000460053 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.5
SPOCK2-204ENST00000460053 UBAP1LF5GYI3 381 aa24.43■■□□□ 1.5
SPOCK2-204ENST00000460053 ANKRD30BQ9BXX2 1392 aa24.42■■□□□ 1.5
SPOCK2-204ENST00000460053 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
SPOCK2-204ENST00000460053 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
SPOCK2-204ENST00000460053 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
SPOCK2-204ENST00000460053 SETBP1Q9Y6X0 1596 aa24.39■■□□□ 1.5
SPOCK2-204ENST00000460053 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
SPOCK2-204ENST00000460053 PIK3R4Q99570 1358 aa24.38■■□□□ 1.49
SPOCK2-204ENST00000460053 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
SPOCK2-204ENST00000460053 TOM1O60784 492 aa24.37■■□□□ 1.49
SPOCK2-204ENST00000460053 SOCS7O14512 581 aa24.36■■□□□ 1.49
SPOCK2-204ENST00000460053 RBM33Q96EV2 1170 aaKnown RBP24.36■■□□□ 1.49
SPOCK2-204ENST00000460053 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
SPOCK2-204ENST00000460053 PPLO60437 1756 aa24.36■■□□□ 1.49
SPOCK2-204ENST00000460053 AMOTL2Q9Y2J4 779 aa24.35■■□□□ 1.49
SPOCK2-204ENST00000460053 TMEM94Q12767 1356 aa24.34■■□□□ 1.49
SPOCK2-204ENST00000460053 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
SPOCK2-204ENST00000460053 ADGRF5Q8IZF2 1346 aa24.33■■□□□ 1.48
SPOCK2-204ENST00000460053 METP08581 1390 aa24.32■■□□□ 1.48
SPOCK2-204ENST00000460053 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
SPOCK2-204ENST00000460053 XIRP1Q702N8 1843 aaKnown RBP24.31■■□□□ 1.48
SPOCK2-204ENST00000460053 PIP4K2BP78356 416 aa24.3■■□□□ 1.48
SPOCK2-204ENST00000460053 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
SPOCK2-204ENST00000460053 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
SPOCK2-204ENST00000460053 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
SPOCK2-204ENST00000460053 C14orf37Q86TY3 774 aa24.24■■□□□ 1.47
SPOCK2-204ENST00000460053 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
SPOCK2-204ENST00000460053 MSH6P52701 1360 aa24.22■■□□□ 1.47
SPOCK2-204ENST00000460053 DCAF11Q8TEB1 546 aa24.22■■□□□ 1.47
SPOCK2-204ENST00000460053 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
SPOCK2-204ENST00000460053 KDM2AQ9Y2K7 1162 aa24.21■■□□□ 1.47
SPOCK2-204ENST00000460053 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
SPOCK2-204ENST00000460053 PIK3C2GO75747 1445 aa24.2■■□□□ 1.46
SPOCK2-204ENST00000460053 C19orf44Q9H6X5 657 aa24.19■■□□□ 1.46
SPOCK2-204ENST00000460053 MYOM2P54296 1465 aa24.19■■□□□ 1.46
SPOCK2-204ENST00000460053 STAC3Q96MF2 364 aa24.18■■□□□ 1.46
SPOCK2-204ENST00000460053 C14orf93Q9H972 538 aaKnown RBP24.18■■□□□ 1.46
SPOCK2-204ENST00000460053 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
SPOCK2-204ENST00000460053 NRXN1Q9ULB1 1477 aa24.17■■□□□ 1.46
SPOCK2-204ENST00000460053 CFAP70Q5T0N1 1121 aa24.16■■□□□ 1.46
SPOCK2-204ENST00000460053 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
SPOCK2-204ENST00000460053 ATF3P18847 181 aa24.14■■□□□ 1.45
SPOCK2-204ENST00000460053 SLAIN2Q9P270 581 aa24.14■■□□□ 1.45
SPOCK2-204ENST00000460053 STK26Q9P289 416 aa24.14■■□□□ 1.45
SPOCK2-204ENST00000460053 HSPA1LP34931 641 aa24.13■■□□□ 1.45
SPOCK2-204ENST00000460053 SIN3AQ96ST3 1273 aa24.13■■□□□ 1.45
SPOCK2-204ENST00000460053 CADPS2Q86UW7 1296 aa24.12■■□□□ 1.45
SPOCK2-204ENST00000460053 ROBO2Q9HCK4 1378 aa24.12■■□□□ 1.45
SPOCK2-204ENST00000460053 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
SPOCK2-204ENST00000460053 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
SPOCK2-204ENST00000460053 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
SPOCK2-204ENST00000460053 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
SPOCK2-204ENST00000460053 FAM135BQ49AJ0 1406 aa24.09■■□□□ 1.45
SPOCK2-204ENST00000460053 PRAG1Q86YV5 1406 aa24.09■■□□□ 1.45
SPOCK2-204ENST00000460053 ABCC11Q96J66 1382 aa24.08■■□□□ 1.45
SPOCK2-204ENST00000460053 PCGF6Q9BYE7 350 aa24.08■■□□□ 1.45
SPOCK2-204ENST00000460053 ASXL1Q8IXJ9 1541 aa24.07■■□□□ 1.44
SPOCK2-204ENST00000460053 YTHDC2Q9H6S0 1430 aaKnown RBP24.07■■□□□ 1.44
SPOCK2-204ENST00000460053 LAMC1P11047 1609 aa24.06■■□□□ 1.44
SPOCK2-204ENST00000460053 ADGRL3Q9HAR2 1447 aa24.05■■□□□ 1.44
SPOCK2-204ENST00000460053 WAPLQ7Z5K2 1190 aa24.05■■□□□ 1.44
SPOCK2-204ENST00000460053 L3MBTL2Q969R5 705 aa24.04■■□□□ 1.44
SPOCK2-204ENST00000460053 TECPR2O15040 1411 aa24.03■■□□□ 1.44
SPOCK2-204ENST00000460053 DCCP43146 1447 aa24.03■■□□□ 1.44
SPOCK2-204ENST00000460053 SIRT1Q96EB6 747 aa24.02■■□□□ 1.44
SPOCK2-204ENST00000460053 ROBO1Q9Y6N7 1651 aa24.02■■□□□ 1.44
SPOCK2-204ENST00000460053 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
SPOCK2-204ENST00000460053 KNDC1Q76NI1 1749 aa23.99■■□□□ 1.43
SPOCK2-204ENST00000460053 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
SPOCK2-204ENST00000460053 ADGRB1O14514 1584 aa23.97■■□□□ 1.43
SPOCK2-204ENST00000460053 TRAK1Q9UPV9 953 aa23.97■■□□□ 1.43
SPOCK2-204ENST00000460053 MST1RQ04912 1400 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms