RNA–Protein interactions for RNA: ENST00000459910.5

PSMD2-208, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 5

Gene PSMD2, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-208	ENST00000459910	BCAN	Q96GW7	911 aa		33.83	■■■■□ 3.01
PSMD2-208	ENST00000459910	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.8	■■■■□ 3
PSMD2-208	ENST00000459910	LRRC7	Q96NW7	1537 aa		33.79	■■■■□ 3
PSMD2-208	ENST00000459910	TRPM2	O94759	1503 aa		33.78	■■■■□ 3
PSMD2-208	ENST00000459910	PLEKHG1	Q9ULL1	1385 aa		33.77	■■■■□ 3
PSMD2-208	ENST00000459910	TOM1	O60784	492 aa		33.77	■■■■□ 3
PSMD2-208	ENST00000459910	SLC26A8	Q96RN1	970 aa		33.74	■■■□□ 2.99
PSMD2-208	ENST00000459910	SCAF1	Q9H7N4	1312 aa	Known RBP	33.72	■■■□□ 2.99
PSMD2-208	ENST00000459910	KIF1B	O60333	1816 aa		33.72	■■■□□ 2.99
PSMD2-208	ENST00000459910	CLTCL1	P53675	1640 aa		33.71	■■■□□ 2.99
PSMD2-208	ENST00000459910	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.71	■■■□□ 2.99
PSMD2-208	ENST00000459910	DIP2A	Q14689	1571 aa		33.68	■■■□□ 2.98
PSMD2-208	ENST00000459910	NWD1	Q149M9	1564 aa		33.68	■■■□□ 2.98
PSMD2-208	ENST00000459910	KCNA6	P17658	529 aa		33.67	■■■□□ 2.98
PSMD2-208	ENST00000459910	NKTR	P30414	1462 aa	Known RBP	33.67	■■■□□ 2.98
PSMD2-208	ENST00000459910	XIRP1	Q702N8	1843 aa	Known RBP	33.66	■■■□□ 2.98
PSMD2-208	ENST00000459910	PIP4K2B	P78356	416 aa		33.65	■■■□□ 2.98
PSMD2-208	ENST00000459910	ZNF326	Q5BKZ1	582 aa	Known RBP	33.65	■■■□□ 2.98
PSMD2-208	ENST00000459910	SENP3	Q9H4L4	574 aa	Predicted RBP	33.65	■■■□□ 2.98
PSMD2-208	ENST00000459910	CHD2	O14647	1828 aa	Known RBP	33.63	■■■□□ 2.97
PSMD2-208	ENST00000459910	ACIN1	Q9UKV3	1341 aa	Known RBP	33.63	■■■□□ 2.97
PSMD2-208	ENST00000459910	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.63	■■■□□ 2.97
PSMD2-208	ENST00000459910	TBX22	Q9Y458	520 aa		33.58	■■■□□ 2.97
PSMD2-208	ENST00000459910	ALK	Q9UM73	1620 aa		33.57	■■■□□ 2.97
PSMD2-208	ENST00000459910	PROSER2	Q86WR7	435 aa	Predicted RBP	33.57	■■■□□ 2.96
PSMD2-208	ENST00000459910	TMEM94	Q12767	1356 aa		33.57	■■■□□ 2.96
PSMD2-208	ENST00000459910	SETD5	Q9C0A6	1442 aa		33.56	■■■□□ 2.96
PSMD2-208	ENST00000459910	ADAMTS13	Q76LX8	1427 aa		33.55	■■■□□ 2.96
PSMD2-208	ENST00000459910	PIK3R4	Q99570	1358 aa		33.54	■■■□□ 2.96
PSMD2-208	ENST00000459910	NEXMIF	Q5QGS0	1516 aa		33.53	■■■□□ 2.96
PSMD2-208	ENST00000459910	SETBP1	Q9Y6X0	1596 aa		33.53	■■■□□ 2.96
PSMD2-208	ENST00000459910	NRXN3	Q9Y4C0	1643 aa		33.49	■■■□□ 2.95
PSMD2-208	ENST00000459910	CCDC144A	A2RUR9	1427 aa		33.47	■■■□□ 2.95
PSMD2-208	ENST00000459910	MPHOSPH9	Q99550	1183 aa		33.47	■■■□□ 2.95
PSMD2-208	ENST00000459910	MSH6	P52701	1360 aa		33.46	■■■□□ 2.95
PSMD2-208	ENST00000459910	HSPA1L	P34931	641 aa		33.45	■■■□□ 2.95
PSMD2-208	ENST00000459910	FOXD1	Q16676	465 aa		33.44	■■■□□ 2.94
PSMD2-208	ENST00000459910	RAB3GAP2	Q9H2M9	1393 aa		33.42	■■■□□ 2.94
PSMD2-208	ENST00000459910	RBM33	Q96EV2	1170 aa	Known RBP	33.41	■■■□□ 2.94
PSMD2-208	ENST00000459910	PPL	O60437	1756 aa		33.41	■■■□□ 2.94
PSMD2-208	ENST00000459910	RPGRIP1L	Q68CZ1	1315 aa		33.4	■■■□□ 2.94
PSMD2-208	ENST00000459910	NCOA3	Q9Y6Q9	1424 aa		33.39	■■■□□ 2.94
PSMD2-208	ENST00000459910	DISP3	Q9P2K9	1392 aa		33.39	■■■□□ 2.94
PSMD2-208	ENST00000459910	VGF	O15240	615 aa	Predicted RBP	33.39	■■■□□ 2.94
PSMD2-208	ENST00000459910	XRN1	Q8IZH2	1706 aa	Known RBP	33.37	■■■□□ 2.93
PSMD2-208	ENST00000459910	C14orf37	Q86TY3	774 aa		33.37	■■■□□ 2.93
PSMD2-208	ENST00000459910	AMOTL2	Q9Y2J4	779 aa		33.35	■■■□□ 2.93
PSMD2-208	ENST00000459910	PTPRU	Q92729	1446 aa		33.33	■■■□□ 2.93
PSMD2-208	ENST00000459910	FAM135B	Q49AJ0	1406 aa		33.32	■■■□□ 2.92
PSMD2-208	ENST00000459910	ROBO1	Q9Y6N7	1651 aa		33.32	■■■□□ 2.92
PSMD2-208	ENST00000459910	MET	P08581	1390 aa		33.28	■■■□□ 2.92
PSMD2-208	ENST00000459910	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.28	■■■□□ 2.92
PSMD2-208	ENST00000459910	SETD1A	O15047	1707 aa	Known RBP	33.27	■■■□□ 2.92
PSMD2-208	ENST00000459910	IFT172	Q9UG01	1749 aa		33.27	■■■□□ 2.92
PSMD2-208	ENST00000459910	SPATA31E1	Q6ZUB1	1445 aa		33.26	■■■□□ 2.91
PSMD2-208	ENST00000459910	RGL3	Q3MIN7	710 aa		33.23	■■■□□ 2.91
PSMD2-208	ENST00000459910	C19orf44	Q9H6X5	657 aa		33.23	■■■□□ 2.91
PSMD2-208	ENST00000459910	ANKRD30B	Q9BXX2	1392 aa		33.22	■■■□□ 2.91
PSMD2-208	ENST00000459910	ATF3	P18847	181 aa		33.22	■■■□□ 2.91
PSMD2-208	ENST00000459910	CADPS2	Q86UW7	1296 aa		33.22	■■■□□ 2.91
PSMD2-208	ENST00000459910	SLAIN2	Q9P270	581 aa		33.22	■■■□□ 2.91
PSMD2-208	ENST00000459910	MED1	Q15648	1581 aa	Predicted RBP	33.21	■■■□□ 2.91
PSMD2-208	ENST00000459910	HRC	P23327	699 aa		33.19	■■■□□ 2.9
PSMD2-208	ENST00000459910	DCC	P43146	1447 aa		33.19	■■■□□ 2.9
PSMD2-208	ENST00000459910	PTCH1	Q13635	1447 aa		33.16	■■■□□ 2.9
PSMD2-208	ENST00000459910	PHLPP1	O60346	1717 aa		33.14	■■■□□ 2.9
PSMD2-208	ENST00000459910	ADGRL3	Q9HAR2	1447 aa		33.12	■■■□□ 2.89
PSMD2-208	ENST00000459910	NALCN	Q8IZF0	1738 aa		33.12	■■■□□ 2.89
PSMD2-208	ENST00000459910	ADGRF5	Q8IZF2	1346 aa		33.11	■■■□□ 2.89
PSMD2-208	ENST00000459910	PRAG1	Q86YV5	1406 aa		33.1	■■■□□ 2.89
PSMD2-208	ENST00000459910	PIK3C2G	O75747	1445 aa		33.07	■■■□□ 2.88
PSMD2-208	ENST00000459910	MYOM2	P54296	1465 aa		33.05	■■■□□ 2.88
PSMD2-208	ENST00000459910	LAMC1	P11047	1609 aa		33.05	■■■□□ 2.88
PSMD2-208	ENST00000459910	PHF23	Q9BUL5	403 aa	Predicted RBP	33.03	■■■□□ 2.88
PSMD2-208	ENST00000459910	ROBO2	Q9HCK4	1378 aa		33.03	■■■□□ 2.88
PSMD2-208	ENST00000459910	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.02	■■■□□ 2.88
PSMD2-208	ENST00000459910	KNDC1	Q76NI1	1749 aa		33.01	■■■□□ 2.87
PSMD2-208	ENST00000459910	MST1R	Q04912	1400 aa		33	■■■□□ 2.87
PSMD2-208	ENST00000459910	COL16A1	Q07092	1604 aa	Predicted RBP	32.99	■■■□□ 2.87
PSMD2-208	ENST00000459910	NRXN1	Q9ULB1	1477 aa		32.97	■■■□□ 2.87
PSMD2-208	ENST00000459910	ASXL1	Q8IXJ9	1541 aa		32.97	■■■□□ 2.87
PSMD2-208	ENST00000459910	LRPPRC	P42704	1394 aa	Known RBP	32.96	■■■□□ 2.87
PSMD2-208	ENST00000459910	ILDR2	Q71H61	639 aa		32.95	■■■□□ 2.87
PSMD2-208	ENST00000459910	BRINP3	Q76B58	766 aa		32.95	■■■□□ 2.87
PSMD2-208	ENST00000459910	JCAD	Q9P266	1359 aa		32.95	■■■□□ 2.86
PSMD2-208	ENST00000459910	TECPR2	O15040	1411 aa		32.94	■■■□□ 2.86
PSMD2-208	ENST00000459910	STK26	Q9P289	416 aa		32.93	■■■□□ 2.86
PSMD2-208	ENST00000459910	NHSL1	Q5SYE7	1610 aa		32.91	■■■□□ 2.86
PSMD2-208	ENST00000459910	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.91	■■■□□ 2.86
PSMD2-208	ENST00000459910	TMEM132E	Q6IEE7	984 aa		32.9	■■■□□ 2.86
PSMD2-208	ENST00000459910	ABCC11	Q96J66	1382 aa		32.9	■■■□□ 2.86
PSMD2-208	ENST00000459910	CDC42BPG	Q6DT37	1551 aa		32.9	■■■□□ 2.86
PSMD2-208	ENST00000459910	C14orf93	Q9H972	538 aa	Known RBP	32.89	■■■□□ 2.86
PSMD2-208	ENST00000459910	SHPRH	Q149N8	1683 aa		32.87	■■■□□ 2.85
PSMD2-208	ENST00000459910	C1orf167	Q5SNV9	1468 aa		32.86	■■■□□ 2.85
PSMD2-208	ENST00000459910	DHX57	Q6P158	1386 aa	Known RBP	32.86	■■■□□ 2.85
PSMD2-208	ENST00000459910	STAC3	Q96MF2	364 aa		32.85	■■■□□ 2.85
PSMD2-208	ENST00000459910	CFAP70	Q5T0N1	1121 aa		32.84	■■■□□ 2.85
PSMD2-208	ENST00000459910	DCAF11	Q8TEB1	546 aa		32.83	■■■□□ 2.85
PSMD2-208	ENST00000459910	KDM2A	Q9Y2K7	1162 aa		32.81	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms