RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 NUTM2AQ8IVF1 878 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-217ENST00000459625 PHF14O94880 888 aa19.65■□□□□ 0.74
HDAC7-217ENST00000459625 NEUROD6Q96NK8 337 aa19.65■□□□□ 0.74
HDAC7-217ENST00000459625 SETQ01105 290 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-217ENST00000459625 CCDC70Q6NSX1 233 aa19.65■□□□□ 0.74
HDAC7-217ENST00000459625 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
HDAC7-217ENST00000459625 TRDNQ13061 729 aa19.64■□□□□ 0.73
HDAC7-217ENST00000459625 SKIDA1Q1XH10 827 aa19.64■□□□□ 0.73
HDAC7-217ENST00000459625 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
HDAC7-217ENST00000459625 SF3B2Q13435 895 aaKnown RBP19.63■□□□□ 0.73
HDAC7-217ENST00000459625 CPLX2Q6PUV4 134 aaKnown RBP19.63■□□□□ 0.73
HDAC7-217ENST00000459625 ATF3P18847 181 aa19.63■□□□□ 0.73
HDAC7-217ENST00000459625 RALBP1Q15311 655 aa19.63■□□□□ 0.73
HDAC7-217ENST00000459625 STK11IPQ8N1F8 1099 aa19.63■□□□□ 0.73
HDAC7-217ENST00000459625 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
HDAC7-217ENST00000459625 WASHC4Q2M389 1173 aa19.61■□□□□ 0.73
HDAC7-217ENST00000459625 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
HDAC7-217ENST00000459625 IPO7O95373 1038 aaKnown RBP19.6■□□□□ 0.73
HDAC7-217ENST00000459625 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
HDAC7-217ENST00000459625 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
HDAC7-217ENST00000459625 ATP2B2Q01814 1243 aa19.6■□□□□ 0.73
HDAC7-217ENST00000459625 EPS15P42566 896 aa19.6■□□□□ 0.73
HDAC7-217ENST00000459625 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
HDAC7-217ENST00000459625 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
HDAC7-217ENST00000459625 LRRFIP1Q32MZ4 808 aaKnown RBP19.59■□□□□ 0.73
HDAC7-217ENST00000459625 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
HDAC7-217ENST00000459625 RRP12Q5JTH9 1297 aaKnown RBP19.59■□□□□ 0.73
HDAC7-217ENST00000459625 BICD2Q8TD16 824 aa19.59■□□□□ 0.73
HDAC7-217ENST00000459625 WWC2Q6AWC2 1192 aa19.58■□□□□ 0.73
HDAC7-217ENST00000459625 G3BP1Q13283 466 aaKnown RBP eCLIP19.58■□□□□ 0.73
HDAC7-217ENST00000459625 STRN4Q9NRL3 753 aa19.58■□□□□ 0.72
HDAC7-217ENST00000459625 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
HDAC7-217ENST00000459625 ANKRD20A12PQ8NF67 263 aa19.57■□□□□ 0.72
HDAC7-217ENST00000459625 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
HDAC7-217ENST00000459625 RBM42Q9BTD8 480 aaKnown RBP19.57■□□□□ 0.72
HDAC7-217ENST00000459625 TTLL5Q6EMB2 1281 aa19.57■□□□□ 0.72
HDAC7-217ENST00000459625 DDX49Q9Y6V7 483 aaKnown RBP19.57■□□□□ 0.72
HDAC7-217ENST00000459625 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
HDAC7-217ENST00000459625 HOMER1Q86YM7 354 aa19.56■□□□□ 0.72
HDAC7-217ENST00000459625 PIP4K2BP78356 416 aa19.55■□□□□ 0.72
HDAC7-217ENST00000459625 ANKRD30AQ9BXX3 1397 aa19.55■□□□□ 0.72
HDAC7-217ENST00000459625 VPS37CA5D8V6 355 aaPredicted RBP19.55■□□□□ 0.72
HDAC7-217ENST00000459625 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
HDAC7-217ENST00000459625 DDX58O95786 925 aaKnown RBP19.54■□□□□ 0.72
HDAC7-217ENST00000459625 PPM1FP49593 454 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-217ENST00000459625 RAPGEF4Q8WZA2 1011 aa19.54■□□□□ 0.72
HDAC7-217ENST00000459625 PANK3Q9H999 370 aa19.54■□□□□ 0.72
HDAC7-217ENST00000459625 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.53■□□□□ 0.72
HDAC7-217ENST00000459625 HMOX1P09601 288 aa19.52■□□□□ 0.72
HDAC7-217ENST00000459625 ZKSCAN1P17029 563 aaPredicted RBP19.52■□□□□ 0.72
HDAC7-217ENST00000459625 CHMP4CQ96CF2 233 aa19.52■□□□□ 0.72
HDAC7-217ENST00000459625 ATP2B1P20020 1258 aa19.52■□□□□ 0.71
HDAC7-217ENST00000459625 RUFY2Q8WXA3 655 aa19.52■□□□□ 0.71
HDAC7-217ENST00000459625 RBM5P52756 815 aaKnown RBP eCLIP19.51■□□□□ 0.71
HDAC7-217ENST00000459625 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
HDAC7-217ENST00000459625 COG6Q9Y2V7 657 aa19.5■□□□□ 0.71
HDAC7-217ENST00000459625 CHMP4BP1P59074 171 aa19.5■□□□□ 0.71
HDAC7-217ENST00000459625 OFD1O75665 1012 aa19.5■□□□□ 0.71
HDAC7-217ENST00000459625 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
HDAC7-217ENST00000459625 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
HDAC7-217ENST00000459625 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
HDAC7-217ENST00000459625 PDILTQ8N807 584 aa19.49■□□□□ 0.71
HDAC7-217ENST00000459625 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
HDAC7-217ENST00000459625 SAFBQ15424 915 aaKnown RBP eCLIP19.47■□□□□ 0.71
HDAC7-217ENST00000459625 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
HDAC7-217ENST00000459625 RALYLQ86SE5 291 aaKnown RBP19.47■□□□□ 0.71
HDAC7-217ENST00000459625 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
HDAC7-217ENST00000459625 GPS2Q13227 327 aa19.46■□□□□ 0.71
HDAC7-217ENST00000459625 PAXIP1Q6ZW49 1069 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-217ENST00000459625 RUFY1Q96T51 708 aa19.46■□□□□ 0.71
HDAC7-217ENST00000459625 EVC2Q86UK5 1308 aa19.46■□□□□ 0.71
HDAC7-217ENST00000459625 RIPK4P57078 832 aa19.46■□□□□ 0.71
HDAC7-217ENST00000459625 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
HDAC7-217ENST00000459625 MYCNP04198 464 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-217ENST00000459625 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
HDAC7-217ENST00000459625 FAM161AQ3B820 660 aa19.45■□□□□ 0.7
HDAC7-217ENST00000459625 ZNF771Q7L3S4 317 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-217ENST00000459625 DNAJC2Q99543 621 aaKnown RBP19.45■□□□□ 0.7
HDAC7-217ENST00000459625 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
HDAC7-217ENST00000459625 CCDC97Q96F63 343 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-217ENST00000459625 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
HDAC7-217ENST00000459625 WDR70Q9NW82 654 aa19.42■□□□□ 0.7
HDAC7-217ENST00000459625 DIAPH1O60610 1272 aaKnown RBP19.42■□□□□ 0.7
HDAC7-217ENST00000459625 RNF20Q5VTR2 975 aa19.42■□□□□ 0.7
HDAC7-217ENST00000459625 BRMS1Q9HCU9 246 aa19.42■□□□□ 0.7
HDAC7-217ENST00000459625 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
HDAC7-217ENST00000459625 DHX37Q8IY37 1157 aaKnown RBP19.42■□□□□ 0.7
HDAC7-217ENST00000459625 FAM69CQ0P6D2 419 aa19.42■□□□□ 0.7
HDAC7-217ENST00000459625 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
HDAC7-217ENST00000459625 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
HDAC7-217ENST00000459625 CDK5RAP3Q96JB5 506 aa19.41■□□□□ 0.7
HDAC7-217ENST00000459625 BRPF1P55201 1214 aaPredicted RBP19.41■□□□□ 0.7
HDAC7-217ENST00000459625 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
HDAC7-217ENST00000459625 CAGE1Q8TC20 777 aa19.4■□□□□ 0.7
HDAC7-217ENST00000459625 CRBNQ96SW2 442 aa19.4■□□□□ 0.7
HDAC7-217ENST00000459625 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
HDAC7-217ENST00000459625 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
HDAC7-217ENST00000459625 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
HDAC7-217ENST00000459625 VGFO15240 615 aaPredicted RBP19.4■□□□□ 0.7
HDAC7-217ENST00000459625 ESCO1Q5FWF5 840 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms